RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NUP153P49790 1475 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 EIF3AQ14152 1382 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-206ENST00000473684 GOLGA6L6A8MZA4 724 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 CALRP27797 417 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 GPC1P35052 558 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 CHAF1AQ13111 956 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 DGKZQ13574 1117 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 C1orf53Q5VUE5 145 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 TMEM214Q6NUQ4 689 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 CLEC17AQ6ZS10 378 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 KRT222Q8N1A0 295 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 RHBDD1Q8TEB9 315 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 PLA2G2EQ9NZK7 142 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 SSR1P43307 286 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 RAB3GAP1Q15042 981 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 TNPO1Q92973 898 aaKnown RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 DMRTB1Q96MA1 342 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 CTNNA3Q9UI47 895 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 KIF7Q2M1P5 1343 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 DENND4BO75064 1496 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 TNFRSF10AO00220 468 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 RNF144AP50876 292 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 RAD51AP2Q09MP3 1159 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 HSCBQ8IWL3 235 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 PSMD1Q99460 953 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 MED4Q9NPJ6 270 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 SPTLC3Q9NUV7 552 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 KLK14Q9P0G3 267 aa6.17□□□□□ -1.42
TMEM39A-206ENST00000473684 MED14O60244 1454 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 CCDC18Q5T9S5 1454 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 C20orf194Q5TEA3 1177 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 NBPF10Q6P3W6 841 aaKnown RBP6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 IFT43Q96FT9 208 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 TCOF1Q13428 1488 aaKnown RBP6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 ARHGEF5Q12774 1597 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 GPR182O15218 404 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 REC8O95072 547 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 CASQ1P31415 396 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 TXLNAP40222 546 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 MUM1L1Q5H9M0 696 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 TRIM67Q6ZTA4 783 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 EP400NLQ6ZTU2 488 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 SMC5Q8IY18 1101 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 GJD3Q8N144 294 aa6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 ALKBH8Q96BT7 664 aaKnown RBP6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 SETD1AO15047 1707 aaKnown RBP6.16□□□□□ -1.42
TMEM39A-206ENST00000473684 PLIN1O60240 522 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PRR20EP86478 221 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PRR20CP86479 221 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PRR20DP86480 221 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PRR20BP86481 221 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PRR20AP86496 221 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PLCB3Q01970 1234 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 EHHADHQ08426 723 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 MLECQ14165 292 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 NOLC1Q14978 699 aaKnown RBP eCLIP6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 GOLGA6L1Q8N7Z2 621 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 C7orf43Q8WVR3 580 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 HPS1Q92902 700 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 POLIQ9UNA4 740 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 NWD1Q149M9 1564 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 PLCH2O75038 1416 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 ZNF518AQ6AHZ1 1483 aa6.15□□□□□ -1.42
TMEM39A-206ENST00000473684 ZNF853P0CG23 659 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 MZF1P28698 734 aaPredicted RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 CYP2C19P33261 490 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 TDO2P48775 406 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 OS9Q13438 667 aaPredicted RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 C4orf17Q53FE4 359 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 TSEN34Q9BSV6 310 aaKnown RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 XIRP1Q702N8 1843 aaKnown RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 MIA2Q96PC5 1412 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 ZAP70P43403 619 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 ZKSCAN8Q15776 578 aaPredicted RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 GNASQ5JWF2 1037 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 SLC27A3Q5K4L6 730 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 CCDC91Q7Z6B0 441 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 INSM2Q96T92 566 aaPredicted RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 BCS1LQ9Y276 419 aa6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 DDX49Q9Y6V7 483 aaKnown RBP6.15□□□□□ -1.43
TMEM39A-206ENST00000473684 SPATA31E1Q6ZUB1 1445 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 SPINT1O43278 529 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 HNRNPH2P55795 449 aaKnown RBP6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 RNF217Q8TC41 542 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 SNX21Q969T3 373 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 PUS7Q96PZ0 661 aaKnown RBP6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 TERF2IPQ9NYB0 399 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 CROCC2H7BZ55 1655 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 RECKO95980 971 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 PDGFAP04085 211 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 TCF3P15923 654 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 NBPF5PQ86XG9 351 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 EDEM1Q92611 657 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 JARID2Q92833 1246 aaPredicted RBP6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 RBSNQ9H1K0 784 aa6.14□□□□□ -1.43
TMEM39A-206ENST00000473684 KNSTRNQ9Y448 316 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms