RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 DOCK2Q92608 1830 aa17.78■□□□□ 0.44
LMNA-213ENST00000473598 PPEF1O14829 653 aaPredicted RBP17.77■□□□□ 0.44
LMNA-213ENST00000473598 SGSM2O43147 1006 aa17.77■□□□□ 0.44
LMNA-213ENST00000473598 PDIA4P13667 645 aaKnown RBP17.77■□□□□ 0.44
LMNA-213ENST00000473598 CAVIN4Q5BKX8 364 aa17.77■□□□□ 0.44
LMNA-213ENST00000473598 DALRD3Q5D0E6 543 aaKnown RBP17.77■□□□□ 0.44
LMNA-213ENST00000473598 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
LMNA-213ENST00000473598 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
LMNA-213ENST00000473598 PI16Q6UXB8 463 aa17.77■□□□□ 0.44
LMNA-213ENST00000473598 TTLL6Q8N841 843 aa17.77■□□□□ 0.44
LMNA-213ENST00000473598 USP26Q9BXU7 913 aa17.77■□□□□ 0.44
LMNA-213ENST00000473598 GYG1P46976 350 aa17.77■□□□□ 0.43
LMNA-213ENST00000473598 SP8Q8IXZ3 490 aa17.77■□□□□ 0.43
LMNA-213ENST00000473598 FAM84BQ96KN1 310 aaPredicted RBP17.77■□□□□ 0.43
LMNA-213ENST00000473598 MAP7D2Q96T17 732 aa17.77■□□□□ 0.43
LMNA-213ENST00000473598 GPSM2P81274 684 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 NMIQ13287 307 aaPredicted RBP17.76■□□□□ 0.43
LMNA-213ENST00000473598 RASGRF1Q13972 1273 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 TBC1D2Q9BYX2 928 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 HMG20BQ9P0W2 317 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 IRS2Q9Y4H2 1338 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 GOLGA6L3A6NEY3 463 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 KLRK1P26718 216 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 FAM227BQ96M60 508 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 NSFL1CQ9UNZ2 370 aaKnown RBP17.76■□□□□ 0.43
LMNA-213ENST00000473598 ATP6V0A2Q9Y487 856 aa17.76■□□□□ 0.43
LMNA-213ENST00000473598 CYP2E1P05181 493 aaPredicted RBP17.75■□□□□ 0.43
LMNA-213ENST00000473598 TTF1Q15361 905 aaPredicted RBP17.75■□□□□ 0.43
LMNA-213ENST00000473598 FBXO33Q7Z6M2 555 aa17.75■□□□□ 0.43
LMNA-213ENST00000473598 CNKSR1Q969H4 720 aa17.75■□□□□ 0.43
LMNA-213ENST00000473598 GNL3LQ9NVN8 582 aaKnown RBP17.75■□□□□ 0.43
LMNA-213ENST00000473598 RAD50Q92878 1312 aa17.75■□□□□ 0.43
LMNA-213ENST00000473598 C21orf2O43822 256 aa17.74■□□□□ 0.43
LMNA-213ENST00000473598 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
LMNA-213ENST00000473598 ATP2B4P23634 1241 aa17.74■□□□□ 0.43
LMNA-213ENST00000473598 VPS37DQ86XT2 251 aa17.74■□□□□ 0.43
LMNA-213ENST00000473598 A0A0D9SFI3 127 aa17.74■□□□□ 0.43
LMNA-213ENST00000473598 EPB41L2O43491 1005 aaKnown RBP17.74■□□□□ 0.43
LMNA-213ENST00000473598 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
LMNA-213ENST00000473598 LRRFIP1Q32MZ4 808 aaKnown RBP17.73■□□□□ 0.43
LMNA-213ENST00000473598 C15orf52Q6ZUT6 534 aaKnown RBP17.73■□□□□ 0.43
LMNA-213ENST00000473598 GGA1Q9UJY5 639 aa17.73■□□□□ 0.43
LMNA-213ENST00000473598 HIBADHP31937 336 aaKnown RBP17.72■□□□□ 0.43
LMNA-213ENST00000473598 TXNRD3Q86VQ6 643 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 MED23Q9ULK4 1368 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 ZBTB22O15209 634 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 RNF113AO15541 343 aaKnown RBP17.72■□□□□ 0.43
LMNA-213ENST00000473598 UFL1O94874 794 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 CHGBP05060 677 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 C7orf43Q8WVR3 580 aa17.72■□□□□ 0.43
LMNA-213ENST00000473598 PIH1D3Q9NQM4 214 aaKnown RBP17.72■□□□□ 0.43
LMNA-213ENST00000473598 IQSEC3Q9UPP2 1182 aaPredicted RBP17.72■□□□□ 0.43
LMNA-213ENST00000473598 SEMA3EO15041 775 aa17.71■□□□□ 0.43
LMNA-213ENST00000473598 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
LMNA-213ENST00000473598 KIAA1211Q6ZU35 1233 aa17.71■□□□□ 0.43
LMNA-213ENST00000473598 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
LMNA-213ENST00000473598 TBC1D16Q8TBP0 767 aa17.71■□□□□ 0.43
LMNA-213ENST00000473598 LSG1Q9H089 658 aaKnown RBP17.71■□□□□ 0.43
LMNA-213ENST00000473598 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
LMNA-213ENST00000473598 COL1A1P02452 1464 aaPredicted RBP17.71■□□□□ 0.43
LMNA-213ENST00000473598 ESPNB1AK53 854 aa17.71■□□□□ 0.42
LMNA-213ENST00000473598 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.42
LMNA-213ENST00000473598 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.71■□□□□ 0.422e-7■■■□□ 17.1
LMNA-213ENST00000473598 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.42
LMNA-213ENST00000473598 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.42
LMNA-213ENST00000473598 POLLQ9UGP5 575 aa17.71■□□□□ 0.42
LMNA-213ENST00000473598 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
LMNA-213ENST00000473598 MCMDC2Q4G0Z9 681 aa17.7■□□□□ 0.42
LMNA-213ENST00000473598 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 GPR101Q96P66 508 aaPredicted RBP17.69■□□□□ 0.42
LMNA-213ENST00000473598 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
LMNA-213ENST00000473598 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
LMNA-213ENST00000473598 IDH1O75874 414 aaKnown RBP17.69■□□□□ 0.42
LMNA-213ENST00000473598 TERF1P54274 439 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 SLFNL1Q499Z3 407 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 ARHGAP27Q6ZUM4 889 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 ZNF804AQ7Z570 1209 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 ZNF589Q86UQ0 364 aaPredicted RBP17.69■□□□□ 0.42
LMNA-213ENST00000473598 MPNDQ8N594 471 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 KIF2CQ99661 725 aa17.69■□□□□ 0.42
LMNA-213ENST00000473598 ADD2P35612 726 aa17.68■□□□□ 0.42
LMNA-213ENST00000473598 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
LMNA-213ENST00000473598 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
LMNA-213ENST00000473598 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
LMNA-213ENST00000473598 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 MRE11P49959 708 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 RASSF7Q02833 373 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 PTH1RQ03431 593 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 WASHC4Q2M389 1173 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 SLC9C2Q5TAH2 1124 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 MCCP23508 829 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 MAP3K12Q12852 859 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 DPP8Q6V1X1 898 aaPredicted RBP17.67■□□□□ 0.42
LMNA-213ENST00000473598 TDRD7Q8NHU6 1098 aaKnown RBP17.67■□□□□ 0.42
LMNA-213ENST00000473598 APPBP2Q92624 585 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 SNX21Q969T3 373 aa17.67■□□□□ 0.42
LMNA-213ENST00000473598 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
LMNA-213ENST00000473598 NFKBIEO00221 500 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms