RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.61
A1CF-209ENST00000473480 LRRC9Q6ZRR7 1453 aa11.21□□□□□ -0.61
A1CF-209ENST00000473480 PSAPP07602 524 aa11.21□□□□□ -0.61
A1CF-209ENST00000473480 GPLD1P80108 840 aa11.21□□□□□ -0.61
A1CF-209ENST00000473480 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.61
A1CF-209ENST00000473480 NOP53Q9NZM5 478 aaKnown RBP11.21□□□□□ -0.61
A1CF-209ENST00000473480 AFF2P51816 1311 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 MMP20O60882 483 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 NRLP54845 237 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 PLAURQ03405 335 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 DNM1Q05193 864 aaKnown RBP11.2□□□□□ -0.62
A1CF-209ENST00000473480 ZNF211Q13398 564 aaPredicted RBP11.2□□□□□ -0.62
A1CF-209ENST00000473480 C20orf204Q6ZNR8 217 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 FAM35AQ86V20 835 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 ALYREFQ86V81 257 aaKnown RBP11.2□□□□□ -0.62
A1CF-209ENST00000473480 EDEM1Q92611 657 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 ANO2Q9NQ90 1003 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 SAMD9Q5K651 1589 aa11.2□□□□□ -0.62
A1CF-209ENST00000473480 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 ZBTB42B2RXF5 422 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 LILRB5O75023 590 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 MZF1P28698 734 aaPredicted RBP11.19□□□□□ -0.62
A1CF-209ENST00000473480 SOX18P35713 384 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 AAMPQ13685 434 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 NAGPAQ9UK23 515 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 UGGT1Q9NYU2 1555 aa11.19□□□□□ -0.62
A1CF-209ENST00000473480 SERPINB4P48594 390 aa11.18□□□□□ -0.62
A1CF-209ENST00000473480 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
A1CF-209ENST00000473480 PSAPL1Q6NUJ1 521 aa11.18□□□□□ -0.62
A1CF-209ENST00000473480 ICMTO60725 284 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 PDGFAP04085 211 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
A1CF-209ENST00000473480 CPB1P15086 417 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 MLLT1Q03111 559 aaPredicted RBP11.17□□□□□ -0.62
A1CF-209ENST00000473480 TXNDC2Q86VQ3 553 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 TRIM11Q96F44 468 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 DCAF5Q96JK2 942 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 SUV39H2Q9H5I1 410 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 JPH1Q9HDC5 661 aaPredicted RBP11.17□□□□□ -0.62
A1CF-209ENST00000473480 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
A1CF-209ENST00000473480 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
A1CF-209ENST00000473480 BRD1O95696 1058 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 TTC39BQ5VTQ0 682 aaPredicted RBP11.16□□□□□ -0.62
A1CF-209ENST00000473480 C8orf86Q6ZUL3 223 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
A1CF-209ENST00000473480 NUDT8Q8WV74 236 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 ABI2Q9NYB9 513 aaPredicted RBP11.16□□□□□ -0.62
A1CF-209ENST00000473480 FRRS1LQ9P0K9 344 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 TMEM94Q12767 1356 aa11.16□□□□□ -0.62
A1CF-209ENST00000473480 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 H3BRB1 525 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 COL8A1P27658 744 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 ELMSAN1Q6PJG2 1045 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 ZNF438Q7Z4V0 828 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 GLYCTKQ8IVS8 523 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 OR13H1Q8NG92 308 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 TUT1Q9H6E5 874 aaKnown RBP11.15□□□□□ -0.62
A1CF-209ENST00000473480 ELP3Q9H9T3 547 aa11.15□□□□□ -0.62
A1CF-209ENST00000473480 COL16A1Q07092 1604 aaPredicted RBP11.15□□□□□ -0.62
A1CF-209ENST00000473480 LOC102724428A0A0B4J2F2 783 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 USP5P45974 858 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 SIK1P57059 783 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
A1CF-209ENST00000473480 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 PERM1Q5SV97 790 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 XKR5Q6UX68 686 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 HFE2Q6ZVN8 426 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 NSUN5Q96P11 429 aaKnown RBP11.14□□□□□ -0.63
A1CF-209ENST00000473480 POLIQ9UNA4 740 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 EP400Q96L91 3159 aa11.14□□□□□ -0.63
A1CF-209ENST00000473480 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
A1CF-209ENST00000473480 NID1P14543 1247 aa11.13□□□□□ -0.63
A1CF-209ENST00000473480 EIF2AK2P19525 551 aaKnown RBP11.13□□□□□ -0.63
A1CF-209ENST00000473480 LPIN3Q9BQK8 851 aa11.13□□□□□ -0.63
A1CF-209ENST00000473480 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
A1CF-209ENST00000473480 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
A1CF-209ENST00000473480 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
A1CF-209ENST00000473480 ATP7AQ04656 1500 aa11.13□□□□□ -0.63
A1CF-209ENST00000473480 MIA2Q96PC5 1412 aa11.12□□□□□ -0.63
A1CF-209ENST00000473480 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
A1CF-209ENST00000473480 FZD6O60353 706 aa11.12□□□□□ -0.63
A1CF-209ENST00000473480 GHRHP01286 108 aa11.12□□□□□ -0.63
A1CF-209ENST00000473480 AFF1P51825 1210 aaKnown RBP11.12□□□□□ -0.63
A1CF-209ENST00000473480 SPAG9O60271 1321 aaKnown RBP11.11□□□□□ -0.63
A1CF-209ENST00000473480 J3QW42 95 aa11.11□□□□□ -0.63
A1CF-209ENST00000473480 EHHADHQ08426 723 aa11.11□□□□□ -0.63
A1CF-209ENST00000473480 HYAL2Q12891 473 aa11.11□□□□□ -0.63
A1CF-209ENST00000473480 TTC9Q92623 222 aa11.11□□□□□ -0.63
A1CF-209ENST00000473480 TMEM63CQ9P1W3 806 aa11.11□□□□□ -0.63
A1CF-209ENST00000473480 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
A1CF-209ENST00000473480 MSH6P52701 1360 aa11.1□□□□□ -0.63
A1CF-209ENST00000473480 A2MP01023 1474 aa11.1□□□□□ -0.63
A1CF-209ENST00000473480 NHSL1Q5SYE7 1610 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 PLXNC1O60486 1568 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 PZPP20742 1482 aa11.09□□□□□ -0.63
A1CF-209ENST00000473480 PRRT3Q5FWE3 981 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms