RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 FBXO33Q7Z6M2 555 aa17.49■□□□□ 0.39
HIF3A-206ENST00000472815 MASTLQ96GX5 879 aa17.49■□□□□ 0.39
HIF3A-206ENST00000472815 FAM84BQ96KN1 310 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-206ENST00000472815 IGSF3O75054 1194 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 ZBTB7AO95365 584 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 SRGNP10124 158 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 CREB3L3Q68CJ9 461 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 TMED8Q6PL24 325 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-206ENST00000472815 SEC62Q99442 399 aaKnown RBP17.48■□□□□ 0.39
HIF3A-206ENST00000472815 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 PIH1D3Q9NQM4 214 aaKnown RBP17.48■□□□□ 0.39
HIF3A-206ENST00000472815 LRP2BPQ9P2M1 347 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
HIF3A-206ENST00000472815 MYO5AQ9Y4I1 1855 aaKnown RBP17.48■□□□□ 0.39
HIF3A-206ENST00000472815 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-206ENST00000472815 C15orf52Q6ZUT6 534 aaKnown RBP17.47■□□□□ 0.39
HIF3A-206ENST00000472815 ZNF804AQ7Z570 1209 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 GGA1Q9UJY5 639 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 PDE6AP16499 860 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 SP8Q8IXZ3 490 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 OSBP2Q969R2 916 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 PODXL2Q9NZ53 605 aa17.47■□□□□ 0.39
HIF3A-206ENST00000472815 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
HIF3A-206ENST00000472815 H0YIN7 160 aa17.46■□□□□ 0.39
HIF3A-206ENST00000472815 SLC27A2O14975 620 aa17.46■□□□□ 0.39
HIF3A-206ENST00000472815 TSGA10IPQ3SY00 556 aa17.46■□□□□ 0.39
HIF3A-206ENST00000472815 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
HIF3A-206ENST00000472815 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
HIF3A-206ENST00000472815 UFL1O94874 794 aa17.45■□□□□ 0.38
HIF3A-206ENST00000472815 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
HIF3A-206ENST00000472815 POLD1P28340 1107 aa17.45■□□□□ 0.38
HIF3A-206ENST00000472815 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
HIF3A-206ENST00000472815 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
HIF3A-206ENST00000472815 ATP6V0A2Q9Y487 856 aa17.45■□□□□ 0.38
HIF3A-206ENST00000472815 CYP46A1Q9Y6A2 500 aa17.45■□□□□ 0.38
HIF3A-206ENST00000472815 M0R2C6 588 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 GPAA1O43292 621 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
HIF3A-206ENST00000472815 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 JAKMIP1Q96N16 626 aaKnown RBP17.44■□□□□ 0.38
HIF3A-206ENST00000472815 ABCF2Q9UG63 623 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-206ENST00000472815 CHGBP05060 677 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 GPSM2P81274 684 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-206ENST00000472815 STYK1Q6J9G0 422 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
HIF3A-206ENST00000472815 IQSEC3Q9UPP2 1182 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-206ENST00000472815 DUOX1Q9NRD9 1551 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 CCDC88AQ3V6T2 1871 aa17.44■□□□□ 0.38
HIF3A-206ENST00000472815 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
HIF3A-206ENST00000472815 GNAT2P19087 354 aa17.43■□□□□ 0.38
HIF3A-206ENST00000472815 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
HIF3A-206ENST00000472815 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
HIF3A-206ENST00000472815 SPON1Q9HCB6 807 aa17.43■□□□□ 0.38
HIF3A-206ENST00000472815 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
HIF3A-206ENST00000472815 WWC3Q9ULE0 1092 aa17.43■□□□□ 0.38
HIF3A-206ENST00000472815 KIF13BQ9NQT8 1826 aa17.43■□□□□ 0.38
HIF3A-206ENST00000472815 TCRBV5S4A2TA0A5A2 114 aa17.42■□□□□ 0.38
HIF3A-206ENST00000472815 HMGB1P09429 215 aaKnown RBP17.42■□□□□ 0.38
HIF3A-206ENST00000472815 RUFY3Q7L099 469 aa17.42■□□□□ 0.38
HIF3A-206ENST00000472815 WDR66Q8TBY9 1149 aa17.42■□□□□ 0.38
HIF3A-206ENST00000472815 CNKSR1Q969H4 720 aa17.42■□□□□ 0.38
HIF3A-206ENST00000472815 ZNF622Q969S3 477 aaKnown RBP eCLIP17.42■□□□□ 0.38
HIF3A-206ENST00000472815 ZSWIM6Q9HCJ5 1215 aa17.42■□□□□ 0.38
HIF3A-206ENST00000472815 IRS2Q9Y4H2 1338 aa17.42■□□□□ 0.38
HIF3A-206ENST00000472815 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
HIF3A-206ENST00000472815 MAST2Q6P0Q8 1798 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 KLRK1P26718 216 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
HIF3A-206ENST00000472815 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 SLKQ9H2G2 1235 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-206ENST00000472815 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 WTIPA6NIX2 430 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-206ENST00000472815 C6orf229H3BNL8 230 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 SGIP1Q9BQI5 828 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
HIF3A-206ENST00000472815 MPNDQ8N594 471 aa17.4■□□□□ 0.38
HIF3A-206ENST00000472815 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
HIF3A-206ENST00000472815 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
HIF3A-206ENST00000472815 COL1A1P02452 1464 aaPredicted RBP17.4■□□□□ 0.38
HIF3A-206ENST00000472815 SALL1Q9NSC2 1324 aa17.4■□□□□ 0.38
HIF3A-206ENST00000472815 CYP21A2P08686 494 aa17.39■□□□□ 0.37
HIF3A-206ENST00000472815 PTGER2P43116 358 aa17.39■□□□□ 0.37
HIF3A-206ENST00000472815 CHAF1AQ13111 956 aaPredicted RBP17.39■□□□□ 0.37
HIF3A-206ENST00000472815 NAA16Q6N069 864 aaPredicted RBP17.39■□□□□ 0.37
HIF3A-206ENST00000472815 SPRYD3Q8NCJ5 442 aa17.39■□□□□ 0.37
HIF3A-206ENST00000472815 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
HIF3A-206ENST00000472815 EYA3Q99504 573 aa17.39■□□□□ 0.37
HIF3A-206ENST00000472815 NACAP1Q9BZK3 213 aa17.39■□□□□ 0.37
HIF3A-206ENST00000472815 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
HIF3A-206ENST00000472815 ZMYM6O95789 1325 aa17.39■□□□□ 0.37
HIF3A-206ENST00000472815 APPP05067 770 aa17.38■□□□□ 0.37
HIF3A-206ENST00000472815 CYP7A1P22680 504 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms