RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 NMIQ13287 307 aaPredicted RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 EPHA10Q5JZY3 1008 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 LMBR1LQ6UX01 489 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 ZNF598Q86UK7 904 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 MAP4K1Q92918 833 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 ZNF775Q96BV0 537 aaPredicted RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 CHMP4CQ96CF2 233 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 TTC14Q96N46 770 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 UPF3BQ9BZI7 483 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 ALDH8A1Q9H2A2 487 aaPredicted RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 GRPEL1Q9HAV7 217 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 SMC3Q9UQE7 1217 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 AKAP2Q9Y2D5 859 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 CHMP3Q9Y3E7 222 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 SHANK3Q9BYB0 1731 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 PLCH1Q4KWH8 1693 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 GPR37O15354 613 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 GDF9O60383 454 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 A1BGP04217 495 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 AK2P54819 239 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 FOXO4P98177 505 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 TCIRG1Q13488 830 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 NECTIN1Q15223 517 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 ZNF697Q5TEC3 545 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 PRPF40BQ6NWY9 871 aaKnown RBP9.11□□□□□ -0.95
CCDC171-205ENST00000472806 RUFY3Q7L099 469 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 JAKMIP1Q96N16 626 aaKnown RBP9.11□□□□□ -0.95
CCDC171-205ENST00000472806 PHOX2BQ99453 314 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 HAUS7Q99871 368 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 ISCA1Q9BUE6 129 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 AHDC1Q5TGY3 1603 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-205ENST00000472806 COL22A1Q8NFW1 1626 aaPredicted RBP9.11□□□□□ -0.95
CCDC171-205ENST00000472806 JCADQ9P266 1359 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 MED23Q9ULK4 1368 aa9.11□□□□□ -0.95
CCDC171-205ENST00000472806 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-205ENST00000472806 EYA2O00167 538 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 EXOC5O00471 708 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 PCCAP05165 728 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-205ENST00000472806 PDCP20941 246 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
CCDC171-205ENST00000472806 ZNF445P59923 1031 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 CCDC57Q2TAC2 916 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 BLOC1S2Q6QNY1 142 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 TTLL7Q6ZT98 887 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 FAM43AQ8N2R8 423 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 PLA2G12BQ9BX93 195 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 HELLSQ9NRZ9 838 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 LMBRD1Q9NUN5 540 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 BTG4Q9NY30 223 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 CEP126Q9P2H0 1117 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 DBNLQ9UJU6 430 aaKnown RBP9.1□□□□□ -0.95
CCDC171-205ENST00000472806 DISP2A7MBM2 1401 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 PALLDQ8WX93 1383 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 ABCC12Q96J65 1359 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 SPEF2Q9C093 1822 aa9.1□□□□□ -0.95
CCDC171-205ENST00000472806 SH3TC1Q8TE82 1336 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 CDHR2Q9BYE9 1310 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 SLC27A2O14975 620 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 PRPF40AO75400 957 aaKnown RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 HMGB1P09429 215 aaKnown RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 XRCC6P12956 609 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 HSP90B1P14625 803 aaKnown RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 PTH1RQ03431 593 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 TAF7LQ5H9L4 462 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 NOL8Q76FK4 1167 aaKnown RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 KBTBD3Q8NAB2 608 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 ZBTB38Q8NAP3 1195 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 KLHDC4Q8TBB5 520 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 SLC6A16Q9GZN6 736 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 IL25Q9H293 177 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 ZBTB3Q9H5J0 574 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 TLR7Q9NYK1 1049 aaKnown RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 BRPF3Q9ULD4 1205 aa9.09□□□□□ -0.95
CCDC171-205ENST00000472806 THRAP3Q9Y2W1 955 aaKnown RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 RPAP1Q9BWH6 1393 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-205ENST00000472806 TJP1Q07157 1748 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 MAP3K15Q6ZN16 1313 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 NR1I2O75469 434 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 OATP04181 439 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 ZFYP08048 801 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-205ENST00000472806 ZSCAN22P10073 491 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-205ENST00000472806 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 USPL1Q5W0Q7 1092 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
CCDC171-205ENST00000472806 PIGBQ92521 554 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 FAM227BQ96M60 508 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 NEUROD6Q96NK8 337 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 DBNDD2Q9BQY9 259 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 ZDHHC9Q9Y397 364 aa9.08□□□□□ -0.96
CCDC171-205ENST00000472806 BCL9O00512 1426 aa9.07□□□□□ -0.96
CCDC171-205ENST00000472806 ZNF609O15014 1411 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms