RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 H7C1W4 665 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 DLL1O00548 723 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 HSP90B1P14625 803 aaKnown RBP12.03□□□□□ -0.48
VCL-204ENST00000472585 GNAI1P63096 354 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 STRIP1Q5VSL9 837 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 OTUD7BQ6GQQ9 843 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 EFCC1Q9HA90 598 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 ANGEL1Q9UNK9 670 aaKnown RBP12.03□□□□□ -0.48
VCL-204ENST00000472585 IRS2Q9Y4H2 1338 aa12.03□□□□□ -0.48
VCL-204ENST00000472585 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.48
VCL-204ENST00000472585 NEURL1BA8MQ27 555 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 CASP7P55210 303 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 CAP1Q01518 475 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 KIAA0825Q8IV33 1275 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 CD99L2Q8TCZ2 262 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 CDC5LQ99459 802 aaKnown RBP12.02□□□□□ -0.49
VCL-204ENST00000472585 COA1Q9GZY4 146 aa12.02□□□□□ -0.49
VCL-204ENST00000472585 ARHGEF6Q15052 776 aa12.01□□□□□ -0.49
VCL-204ENST00000472585 SLC4A8Q2Y0W8 1093 aa12.01□□□□□ -0.49
VCL-204ENST00000472585 TTLL5Q6EMB2 1281 aa12.01□□□□□ -0.49
VCL-204ENST00000472585 APOBEC3FQ8IUX4 373 aaKnown RBP12.01□□□□□ -0.49
VCL-204ENST00000472585 SLC17A8Q8NDX2 589 aa12.01□□□□□ -0.49
VCL-204ENST00000472585 TSR2Q969E8 191 aaKnown RBP12.01□□□□□ -0.49
VCL-204ENST00000472585 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
VCL-204ENST00000472585 MYO3BQ8WXR4 1341 aa12.01□□□□□ -0.49
VCL-204ENST00000472585 CSF1RP07333 972 aa12□□□□□ -0.49
VCL-204ENST00000472585 ZBTB48P10074 688 aaPredicted RBP12□□□□□ -0.49
VCL-204ENST00000472585 GTF2IP78347 998 aa12□□□□□ -0.49
VCL-204ENST00000472585 SP3Q02447 781 aa12□□□□□ -0.49
VCL-204ENST00000472585 CCDC184Q52MB2 194 aa12□□□□□ -0.49
VCL-204ENST00000472585 CCDC30Q5VVM6 783 aa12□□□□□ -0.49
VCL-204ENST00000472585 UBE3BQ7Z3V4 1068 aa12□□□□□ -0.49
VCL-204ENST00000472585 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
VCL-204ENST00000472585 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
VCL-204ENST00000472585 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
VCL-204ENST00000472585 H0YGN5 161 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 IGF2BP3O00425 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
VCL-204ENST00000472585 PPP1R12BO60237 982 aaPredicted RBP11.99□□□□□ -0.49
VCL-204ENST00000472585 DDX58O95786 925 aaKnown RBP11.99□□□□□ -0.49
VCL-204ENST00000472585 ITGA6P23229 1130 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 GJA5P36382 358 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 MMP14P50281 582 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 SLC9C1Q4G0N8 1177 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
VCL-204ENST00000472585 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 SSC5DA1L4H1 1573 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
VCL-204ENST00000472585 SZT2Q5T011 3432 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 TAF5LO75529 589 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 CHRNDQ07001 517 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 CRHR2Q13324 411 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 GCKRQ14397 625 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 MAP3K11Q16584 847 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 MIER1Q8N108 512 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 WNK4Q96J92 1243 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 ZNF333Q96JL9 665 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 PRMT6Q96LA8 375 aaPredicted RBP11.98□□□□□ -0.49
VCL-204ENST00000472585 PTPN18Q99952 460 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 CD209Q9NNX6 404 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 BRCA2P51587 3418 aa11.98□□□□□ -0.49
VCL-204ENST00000472585 LAMB1P07942 1786 aa11.97□□□□□ -0.49
VCL-204ENST00000472585 NBPF12Q5TAG4 269 aaPredicted RBP11.97□□□□□ -0.49
VCL-204ENST00000472585 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
VCL-204ENST00000472585 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
VCL-204ENST00000472585 MYCP01106 439 aaPredicted RBP11.96□□□□□ -0.49
VCL-204ENST00000472585 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
VCL-204ENST00000472585 FOXO4P98177 505 aa11.96□□□□□ -0.49
VCL-204ENST00000472585 MTMR14Q8NCE2 650 aa11.96□□□□□ -0.49
VCL-204ENST00000472585 DPF3Q92784 378 aa11.96□□□□□ -0.49
VCL-204ENST00000472585 JAG2Q9Y219 1238 aa11.96□□□□□ -0.49
VCL-204ENST00000472585 COL1A1P02452 1464 aaPredicted RBP11.95□□□□□ -0.5
VCL-204ENST00000472585 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 CLRN2A0PK11 232 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 UNCXA6NJT0 531 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 F8W031 263 aaPredicted RBP11.95□□□□□ -0.5
VCL-204ENST00000472585 IREB2P48200 963 aaKnown RBP11.95□□□□□ -0.5
VCL-204ENST00000472585 CALD1Q05682 793 aaKnown RBP11.95□□□□□ -0.5
VCL-204ENST00000472585 DLGAP5Q15398 846 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 C15orf52Q6ZUT6 534 aaKnown RBP11.95□□□□□ -0.5
VCL-204ENST00000472585 CDAN1Q8IWY9 1227 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 ANKRD2Q9GZV1 360 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
VCL-204ENST00000472585 HAX1O00165 279 aa11.94□□□□□ -0.5
VCL-204ENST00000472585 IL1R1P14778 569 aa11.94□□□□□ -0.5
VCL-204ENST00000472585 NEXNQ0ZGT2 675 aa11.94□□□□□ -0.5
VCL-204ENST00000472585 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
VCL-204ENST00000472585 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
VCL-204ENST00000472585 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
VCL-204ENST00000472585 ZNF594Q96JF6 807 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms