RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 ZNF417Q8TAU3 575 aa10.51□□□□□ -0.73
SCAF4-205ENST00000472318 BHMTQ93088 406 aa10.51□□□□□ -0.73
SCAF4-205ENST00000472318 ZNF587Q96SQ5 575 aaPredicted RBP10.51□□□□□ -0.73
SCAF4-205ENST00000472318 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
SCAF4-205ENST00000472318 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
SCAF4-205ENST00000472318 C1QTNF9BB2RNN3 333 aa10.5□□□□□ -0.73
SCAF4-205ENST00000472318 ALBP02768 609 aa10.5□□□□□ -0.73
SCAF4-205ENST00000472318 CHRNA4P43681 627 aa10.5□□□□□ -0.73
SCAF4-205ENST00000472318 MYO19Q96H55 970 aa10.5□□□□□ -0.73
SCAF4-205ENST00000472318 UTRNP46939 3433 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 ADAM23O75077 832 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 GRNP28799 593 aaKnown RBP10.49□□□□□ -0.73
SCAF4-205ENST00000472318 BAG6P46379 1132 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 MICALL1Q8N3F8 863 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
SCAF4-205ENST00000472318 CEP152O94986 1710 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 TSPY4P0CV99 314 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 TSPY10P0CW01 314 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 RFX1P22670 979 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 INPP5BP32019 993 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 DGKZQ13574 1117 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 ELOAQ14241 798 aaKnown RBP10.48□□□□□ -0.73
SCAF4-205ENST00000472318 SWI5Q1ZZU3 235 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 CDCA8Q53HL2 280 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 C20orf204Q6ZNR8 217 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 GSX2Q9BZM3 304 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 ZMIZ1Q9ULJ6 1067 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 TBX22Q9Y458 520 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 CFAP65Q6ZU64 1925 aaKnown RBP10.48□□□□□ -0.73
SCAF4-205ENST00000472318 PLEKHG1Q9ULL1 1385 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 CEP350Q5VT06 3117 aa10.48□□□□□ -0.73
SCAF4-205ENST00000472318 CHD2O14647 1828 aaKnown RBP10.47□□□□□ -0.73
SCAF4-205ENST00000472318 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
SCAF4-205ENST00000472318 EPB42P16452 691 aa10.47□□□□□ -0.73
SCAF4-205ENST00000472318 ACIN1Q9UKV3 1341 aaKnown RBP10.47□□□□□ -0.73
SCAF4-205ENST00000472318 MST1RQ04912 1400 aa10.47□□□□□ -0.73
SCAF4-205ENST00000472318 NID1P14543 1247 aa10.46□□□□□ -0.73
SCAF4-205ENST00000472318 IDH3AP50213 366 aa10.46□□□□□ -0.73
SCAF4-205ENST00000472318 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.73
SCAF4-205ENST00000472318 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
SCAF4-205ENST00000472318 SLC6A14Q9UN76 642 aa10.46□□□□□ -0.73
SCAF4-205ENST00000472318 ZFYVE9O95405 1425 aa10.46□□□□□ -0.74
SCAF4-205ENST00000472318 PTCH1Q13635 1447 aa10.45□□□□□ -0.74
SCAF4-205ENST00000472318 SRPK2P78362 688 aaKnown RBP10.45□□□□□ -0.74
SCAF4-205ENST00000472318 CCINQ13939 588 aa10.45□□□□□ -0.74
SCAF4-205ENST00000472318 R3HDM1Q15032 1099 aaKnown RBP10.45□□□□□ -0.74
SCAF4-205ENST00000472318 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
SCAF4-205ENST00000472318 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
SCAF4-205ENST00000472318 ARID3AQ99856 593 aa10.45□□□□□ -0.74
SCAF4-205ENST00000472318 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.45□□□□□ -0.74
SCAF4-205ENST00000472318 ADAMTS13Q76LX8 1427 aa10.44□□□□□ -0.74
SCAF4-205ENST00000472318 NFKB1P19838 968 aa10.44□□□□□ -0.74
SCAF4-205ENST00000472318 ARSDP51689 593 aa10.44□□□□□ -0.74
SCAF4-205ENST00000472318 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
SCAF4-205ENST00000472318 C11orf91Q3C1V1 193 aa10.44□□□□□ -0.74
SCAF4-205ENST00000472318 PNMA5Q96PV4 448 aa10.44□□□□□ -0.74
SCAF4-205ENST00000472318 C11orf16Q9NQ32 467 aa10.44□□□□□ -0.74
SCAF4-205ENST00000472318 ADGRB3O60242 1522 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 DCCP43146 1447 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 PTPRUQ92729 1446 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
SCAF4-205ENST00000472318 OCLNQ16625 522 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 PRRT3Q5FWE3 981 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 DNAJB12Q9NXW2 375 aaKnown RBP10.43□□□□□ -0.74
SCAF4-205ENST00000472318 NAGPAQ9UK23 515 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 LRFN2Q9ULH4 789 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 AMOTL2Q9Y2J4 779 aa10.43□□□□□ -0.74
SCAF4-205ENST00000472318 EIF2AK4Q9P2K8 1649 aaKnown RBP10.43□□□□□ -0.74
SCAF4-205ENST00000472318 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
SCAF4-205ENST00000472318 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
SCAF4-205ENST00000472318 TBC1D8BQ0IIM8 1120 aa10.42□□□□□ -0.74
SCAF4-205ENST00000472318 STK32AQ8WU08 396 aa10.42□□□□□ -0.74
SCAF4-205ENST00000472318 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.74
SCAF4-205ENST00000472318 ARHGEF5Q12774 1597 aa10.42□□□□□ -0.74
SCAF4-205ENST00000472318 NOS1P29475 1434 aa10.41□□□□□ -0.74
SCAF4-205ENST00000472318 RIMS2Q9UQ26 1411 aa10.41□□□□□ -0.74
SCAF4-205ENST00000472318 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.41□□□□□ -0.74
SCAF4-205ENST00000472318 K7ELQ4 463 aaPredicted RBP10.41□□□□□ -0.74
SCAF4-205ENST00000472318 LILRB5O75023 590 aa10.41□□□□□ -0.74
SCAF4-205ENST00000472318 MICAL2O94851 1124 aa10.41□□□□□ -0.74
SCAF4-205ENST00000472318 MAP3K6O95382 1288 aa10.41□□□□□ -0.74
SCAF4-205ENST00000472318 RALGAPBQ86X10 1494 aa10.41□□□□□ -0.74
SCAF4-205ENST00000472318 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 GLI3P10071 1580 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 PRMT3O60678 531 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 ATG7O95352 703 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 C1QTNF8P60827 252 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 PRIMPOLQ96LW4 560 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 IGFLR1Q9H665 355 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 ZFATQ9P243 1243 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 UNC13BO14795 1591 aa10.39□□□□□ -0.75
SCAF4-205ENST00000472318 FAM229AH3BQW9 127 aa10.38□□□□□ -0.75
SCAF4-205ENST00000472318 FURINP09958 794 aa10.38□□□□□ -0.75
SCAF4-205ENST00000472318 COX20Q5RI15 118 aa10.38□□□□□ -0.75
SCAF4-205ENST00000472318 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
SCAF4-205ENST00000472318 IFT43Q96FT9 208 aa10.38□□□□□ -0.75
SCAF4-205ENST00000472318 JPH1Q9HDC5 661 aaPredicted RBP10.38□□□□□ -0.75
SCAF4-205ENST00000472318 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms