RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCN9A-206ENST00000472119 RGL4Q8IZJ4 473 aa10.33□□□□□ -0.76
SCN9A-206ENST00000472119 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
SCN9A-206ENST00000472119 CACTIN-AS1Q8N1I8 211 aa10.33□□□□□ -0.76
SCN9A-206ENST00000472119 MYRFLQ96LU7 910 aa10.33□□□□□ -0.76
SCN9A-206ENST00000472119 KCNK4Q9NYG8 393 aa10.33□□□□□ -0.76
SCN9A-206ENST00000472119 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
SCN9A-206ENST00000472119 ARAP3Q8WWN8 1544 aa10.33□□□□□ -0.76
SCN9A-206ENST00000472119 ADGRL1O94910 1474 aa10.32□□□□□ -0.76
SCN9A-206ENST00000472119 OPLAHO14841 1288 aa10.32□□□□□ -0.76
SCN9A-206ENST00000472119 C11orf91Q3C1V1 193 aa10.32□□□□□ -0.76
SCN9A-206ENST00000472119 AFAP1Q8N556 730 aa10.32□□□□□ -0.76
SCN9A-206ENST00000472119 KCNF1Q9H3M0 494 aa10.32□□□□□ -0.76
SCN9A-206ENST00000472119 CDC42BPBQ9Y5S2 1711 aa10.32□□□□□ -0.76
SCN9A-206ENST00000472119 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
SCN9A-206ENST00000472119 CDC42BPAQ5VT25 1732 aa10.31□□□□□ -0.76
SCN9A-206ENST00000472119 CDC25BP30305 580 aa10.31□□□□□ -0.76
SCN9A-206ENST00000472119 LACRTQ9GZZ8 138 aa10.31□□□□□ -0.76
SCN9A-206ENST00000472119 PREX2Q70Z35 1606 aa10.31□□□□□ -0.76
SCN9A-206ENST00000472119 SOX18P35713 384 aa10.3□□□□□ -0.76
SCN9A-206ENST00000472119 CLEC10AQ8IUN9 316 aa10.3□□□□□ -0.76
SCN9A-206ENST00000472119 FAM20CQ8IXL6 584 aa10.3□□□□□ -0.76
SCN9A-206ENST00000472119 CARD10Q9BWT7 1032 aa10.3□□□□□ -0.76
SCN9A-206ENST00000472119 ARHGEF12Q9NZN5 1544 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 DUOXA2Q1HG44 320 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 KIAA1211Q6ZU35 1233 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 FAM83CQ9BQN1 747 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 MYOM3Q5VTT5 1437 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 CFAP74Q9C0B2 1584 aa10.29□□□□□ -0.76
SCN9A-206ENST00000472119 TRAPPC8Q9Y2L5 1435 aa10.28□□□□□ -0.76
SCN9A-206ENST00000472119 WDR64B1ANS9 1081 aa10.28□□□□□ -0.76
SCN9A-206ENST00000472119 SART1O43290 800 aaKnown RBP10.28□□□□□ -0.76
SCN9A-206ENST00000472119 C8AP07357 584 aa10.28□□□□□ -0.76
SCN9A-206ENST00000472119 HOXD8P13378 290 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-206ENST00000472119 HOXA10P31260 410 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-206ENST00000472119 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
SCN9A-206ENST00000472119 BEND4Q6ZU67 534 aa10.28□□□□□ -0.76
SCN9A-206ENST00000472119 ANGEL1Q9UNK9 670 aaKnown RBP10.28□□□□□ -0.76
SCN9A-206ENST00000472119 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.76
SCN9A-206ENST00000472119 POGZQ7Z3K3 1410 aa10.27□□□□□ -0.77
SCN9A-206ENST00000472119 RAD21O60216 631 aa10.27□□□□□ -0.77
SCN9A-206ENST00000472119 BMP3P12645 472 aa10.27□□□□□ -0.77
SCN9A-206ENST00000472119 DPYDQ12882 1025 aa10.27□□□□□ -0.77
SCN9A-206ENST00000472119 ABCC1P33527 1531 aa10.27□□□□□ -0.77
SCN9A-206ENST00000472119 KIAA1107Q9UPP5 1409 aa10.26□□□□□ -0.77
SCN9A-206ENST00000472119 FAM50AQ14320 339 aaKnown RBP10.26□□□□□ -0.77
SCN9A-206ENST00000472119 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
SCN9A-206ENST00000472119 KRTAP4-2Q9BYR5 136 aa10.26□□□□□ -0.77
SCN9A-206ENST00000472119 KCNMB2Q9Y691 235 aa10.26□□□□□ -0.77
SCN9A-206ENST00000472119 SYCP2Q9BX26 1530 aa10.26□□□□□ -0.77
SCN9A-206ENST00000472119 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 ITSN2Q9NZM3 1697 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 PLEKHH2Q8IVE3 1493 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 CDC27P30260 824 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 CEP135Q66GS9 1140 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 UBASH3BQ8TF42 649 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 MYO19Q96H55 970 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 FRMPD1Q5SYB0 1578 aa10.25□□□□□ -0.77
SCN9A-206ENST00000472119 FGD6Q6ZV73 1430 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 CAMSAP2Q08AD1 1489 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 MBD5Q9P267 1494 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 DDX3YO15523 660 aaKnown RBP10.24□□□□□ -0.77
SCN9A-206ENST00000472119 ATP11AP98196 1134 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 PIM2Q9P1W9 311 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
SCN9A-206ENST00000472119 YEATS2Q9ULM3 1422 aa10.24□□□□□ -0.77
SCN9A-206ENST00000472119 FSCN2O14926 492 aa10.23□□□□□ -0.77
SCN9A-206ENST00000472119 CRTC2Q53ET0 693 aaPredicted RBP10.23□□□□□ -0.77
SCN9A-206ENST00000472119 FAM117BQ6P1L5 589 aa10.23□□□□□ -0.77
SCN9A-206ENST00000472119 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.23□□□□□ -0.77
SCN9A-206ENST00000472119 ASIC4Q96FT7 647 aa10.23□□□□□ -0.77
SCN9A-206ENST00000472119 MFSD14AQ96MC6 490 aa10.23□□□□□ -0.77
SCN9A-206ENST00000472119 LRFN2Q9ULH4 789 aa10.23□□□□□ -0.77
SCN9A-206ENST00000472119 RICTORQ6R327 1708 aa10.23□□□□□ -0.77
SCN9A-206ENST00000472119 FOXO3O43524 673 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 SMNDC1O75940 238 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCN9A-206ENST00000472119 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 PREPP48147 710 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 POU5F2Q8N7G0 328 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 KLHL23Q8NBE8 558 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 FOXD4L4Q8WXT5 416 aaPredicted RBP10.22□□□□□ -0.77
SCN9A-206ENST00000472119 SPACA7Q96KW9 195 aa10.22□□□□□ -0.77
SCN9A-206ENST00000472119 TM4SF5O14894 197 aa10.21□□□□□ -0.77
SCN9A-206ENST00000472119 PTK7Q13308 1070 aa10.21□□□□□ -0.77
SCN9A-206ENST00000472119 NLRP13Q86W25 1043 aa10.21□□□□□ -0.77
SCN9A-206ENST00000472119 TFIP11Q9UBB9 837 aaKnown RBP10.21□□□□□ -0.77
SCN9A-206ENST00000472119 PTPN23Q9H3S7 1636 aa10.21□□□□□ -0.78
SCN9A-206ENST00000472119 ADAM11O75078 769 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 ITGAEP38570 1179 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 KDM5CP41229 1560 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 ARID4BQ4LE39 1312 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-206ENST00000472119 COL13A1Q5TAT6 717 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-206ENST00000472119 ZMYM4Q5VZL5 1548 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 MAGI2Q86UL8 1455 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 ATG3Q9NT62 314 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 MLH3Q9UHC1 1453 aa10.2□□□□□ -0.78
SCN9A-206ENST00000472119 LEMD3Q9Y2U8 911 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms