RNA–Protein interactions for RNA: ENST00000471693.1

SRRM1-209, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 377 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-209ENST00000471693 SSFA2P28290 1259 aa8.57□□□□□ -1.04
SRRM1-209ENST00000471693 GIMAP7Q8NHV1 300 aa8.57□□□□□ -1.04
SRRM1-209ENST00000471693 HHIPQ96QV1 700 aa8.57□□□□□ -1.04
SRRM1-209ENST00000471693 TNFRSF21O75509 655 aa8.56□□□□□ -1.04
SRRM1-209ENST00000471693 TRPA1O75762 1119 aa8.56□□□□□ -1.04
SRRM1-209ENST00000471693 IRAK1P51617 712 aa8.56□□□□□ -1.04
SRRM1-209ENST00000471693 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
SRRM1-209ENST00000471693 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.56□□□□□ -1.04
SRRM1-209ENST00000471693 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 EREGO14944 169 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 PAX4O43316 350 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 SF3B2Q13435 895 aaKnown RBP8.55□□□□□ -1.04
SRRM1-209ENST00000471693 MTMR3Q13615 1198 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 NUTM2GQ5VZR2 741 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 ASAP3Q8TDY4 903 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 NXPE3Q969Y0 559 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 USP26Q9BXU7 913 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 CYP4F12Q9HCS2 524 aa8.55□□□□□ -1.04
SRRM1-209ENST00000471693 MEGF11A6BM72 1044 aa8.54□□□□□ -1.04
SRRM1-209ENST00000471693 GP2P55259 537 aaKnown RBP8.54□□□□□ -1.04
SRRM1-209ENST00000471693 SHKBP1Q8TBC3 707 aa8.54□□□□□ -1.04
SRRM1-209ENST00000471693 SOX17Q9H6I2 414 aaPredicted RBP8.54□□□□□ -1.04
SRRM1-209ENST00000471693 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
SRRM1-209ENST00000471693 COL17A1Q9UMD9 1497 aaPredicted RBP8.53□□□□□ -1.04
SRRM1-209ENST00000471693 TMEM88BA6NKF7 163 aa8.53□□□□□ -1.04
SRRM1-209ENST00000471693 NPR3P17342 541 aa8.53□□□□□ -1.04
SRRM1-209ENST00000471693 RXRBP28702 533 aa8.53□□□□□ -1.04
SRRM1-209ENST00000471693 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
SRRM1-209ENST00000471693 MED26O95402 600 aa8.52□□□□□ -1.05
SRRM1-209ENST00000471693 MAP4P27816 1152 aaKnown RBP8.52□□□□□ -1.05
SRRM1-209ENST00000471693 VN1R5Q7Z5H4 357 aa8.52□□□□□ -1.05
SRRM1-209ENST00000471693 C12orf50Q8NA57 414 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-209ENST00000471693 FOXD3Q9UJU5 478 aaPredicted RBP8.52□□□□□ -1.05
SRRM1-209ENST00000471693 SOX1O00570 391 aaPredicted RBP8.51□□□□□ -1.05
SRRM1-209ENST00000471693 ABL1P00519 1130 aa8.51□□□□□ -1.05
SRRM1-209ENST00000471693 SPINK2P20155 84 aa8.51□□□□□ -1.05
SRRM1-209ENST00000471693 FKBP4Q02790 459 aaKnown RBP eCLIP8.51□□□□□ -1.05
SRRM1-209ENST00000471693 DTX1Q86Y01 620 aa8.51□□□□□ -1.05
SRRM1-209ENST00000471693 SUGCTQ9HAC7 445 aa8.51□□□□□ -1.05
SRRM1-209ENST00000471693 PRR19A6NJB7 356 aa8.5□□□□□ -1.05
SRRM1-209ENST00000471693 SMG8Q8ND04 991 aaKnown RBP8.5□□□□□ -1.05
SRRM1-209ENST00000471693 YIPF2Q9BWQ6 316 aa8.5□□□□□ -1.05
SRRM1-209ENST00000471693 TMPRSS13Q9BYE2 586 aa8.5□□□□□ -1.05
SRRM1-209ENST00000471693 ATG3Q9NT62 314 aa8.5□□□□□ -1.05
SRRM1-209ENST00000471693 OAS3Q9Y6K5 1087 aaKnown RBP8.5□□□□□ -1.05
SRRM1-209ENST00000471693 LOC100289279A0A1B0GTE1 492 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 WDR64B1ANS9 1081 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 GSTM4Q03013 218 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 CPSF6Q16630 551 aaKnown RBP eCLIP8.49□□□□□ -1.05
SRRM1-209ENST00000471693 SGO2Q562F6 1265 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 HGSNATQ68CP4 663 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 B4GALNT3Q6L9W6 998 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 GJD3Q8N144 294 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 MFSD14AQ96MC6 490 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 PIM2Q9P1W9 311 aa8.49□□□□□ -1.05
SRRM1-209ENST00000471693 FZD6O60353 706 aa8.48□□□□□ -1.05
SRRM1-209ENST00000471693 WNT11O96014 354 aa8.48□□□□□ -1.05
SRRM1-209ENST00000471693 ESRRAP11474 423 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-209ENST00000471693 USP11P51784 963 aa8.48□□□□□ -1.05
SRRM1-209ENST00000471693 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
SRRM1-209ENST00000471693 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
SRRM1-209ENST00000471693 TIAF1O95411 115 aa8.47□□□□□ -1.05
SRRM1-209ENST00000471693 TXKP42681 527 aa8.47□□□□□ -1.05
SRRM1-209ENST00000471693 ZNF211Q13398 564 aaPredicted RBP8.47□□□□□ -1.05
SRRM1-209ENST00000471693 EXOSC6Q5RKV6 272 aaKnown RBP8.47□□□□□ -1.05
SRRM1-209ENST00000471693 METTL22Q9BUU2 404 aaPredicted RBP8.47□□□□□ -1.05
SRRM1-209ENST00000471693 OSBPL1AQ9BXW6 950 aa8.47□□□□□ -1.05
SRRM1-209ENST00000471693 LATS2Q9NRM7 1088 aa8.47□□□□□ -1.05
SRRM1-209ENST00000471693 LEMD3Q9Y2U8 911 aa8.47□□□□□ -1.05
SRRM1-209ENST00000471693 FAM95CA0A1B0GW59 222 aa8.46□□□□□ -1.06
SRRM1-209ENST00000471693 PEAR1Q5VY43 1037 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-209ENST00000471693 FBXL6Q8N531 539 aa8.46□□□□□ -1.06
SRRM1-209ENST00000471693 KRTAP4-12Q9BQ66 201 aa8.46□□□□□ -1.06
SRRM1-209ENST00000471693 ZFYVE1Q9HBF4 777 aa8.46□□□□□ -1.06
SRRM1-209ENST00000471693 GOLGA2P5Q9HBQ8 144 aa8.46□□□□□ -1.06
SRRM1-209ENST00000471693 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
SRRM1-209ENST00000471693 ANGEL1Q9UNK9 670 aaKnown RBP8.46□□□□□ -1.06
SRRM1-209ENST00000471693 NEFLP07196 543 aa8.45□□□□□ -1.06
SRRM1-209ENST00000471693 LCE3BQ5TA77 95 aa8.45□□□□□ -1.06
SRRM1-209ENST00000471693 KRTAP1-3Q8IUG1 177 aa8.45□□□□□ -1.06
SRRM1-209ENST00000471693 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
SRRM1-209ENST00000471693 CLEC4MQ9H2X3 399 aaPredicted RBP8.45□□□□□ -1.06
SRRM1-209ENST00000471693 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
SRRM1-209ENST00000471693 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
SRRM1-209ENST00000471693 CYP11A1P05108 521 aa8.44□□□□□ -1.06
SRRM1-209ENST00000471693 TAL1P17542 331 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-209ENST00000471693 NFKBIBQ15653 356 aa8.44□□□□□ -1.06
SRRM1-209ENST00000471693 LIN7BQ9HAP6 207 aa8.44□□□□□ -1.06
SRRM1-209ENST00000471693 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
SRRM1-209ENST00000471693 EGFL7Q9UHF1 273 aa8.44□□□□□ -1.06
SRRM1-209ENST00000471693 BRPF3Q9ULD4 1205 aa8.44□□□□□ -1.06
SRRM1-209ENST00000471693 METTL12A8MUP2 240 aa8.43□□□□□ -1.06
SRRM1-209ENST00000471693 POLR3DP05423 398 aaPredicted RBP8.43□□□□□ -1.06
SRRM1-209ENST00000471693 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
SRRM1-209ENST00000471693 USTQ9Y2C2 406 aa8.43□□□□□ -1.06
SRRM1-209ENST00000471693 A0A096LPE4 126 aa8.42□□□□□ -1.06
SRRM1-209ENST00000471693 A0A1W2PPZ6 126 aa8.42□□□□□ -1.06
SRRM1-209ENST00000471693 FOSL1P15407 271 aa8.42□□□□□ -1.06
SRRM1-209ENST00000471693 SOX4Q06945 474 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms