RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 LPIN2Q92539 896 aa21.98■■□□□ 1.11
COL20A1-205ENST00000471582 UTP14AQ9BVJ6 771 aaKnown RBP21.98■■□□□ 1.11
COL20A1-205ENST00000471582 SCAND2PQ9GZW5 306 aaPredicted RBP21.98■■□□□ 1.11
COL20A1-205ENST00000471582 CLCN1P35523 988 aa21.97■■□□□ 1.11
COL20A1-205ENST00000471582 HMGN5P82970 282 aaKnown RBP21.97■■□□□ 1.11
COL20A1-205ENST00000471582 SUSD4Q5VX71 490 aa21.97■■□□□ 1.11
COL20A1-205ENST00000471582 ZNF274Q96GC6 653 aaPredicted RBP21.97■■□□□ 1.11
COL20A1-205ENST00000471582 KIF3AQ9Y496 699 aa21.97■■□□□ 1.11
COL20A1-205ENST00000471582 BCORQ6W2J9 1755 aa21.97■■□□□ 1.11
COL20A1-205ENST00000471582 BRWD3Q6RI45 1802 aa21.97■■□□□ 1.11
COL20A1-205ENST00000471582 JAK2O60674 1132 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 FGFR2P21802 821 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 EVCP57679 992 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 RBM6P78332 1123 aaKnown RBP21.96■■□□□ 1.11
COL20A1-205ENST00000471582 HS1BP3Q53T59 392 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 PI16Q6UXB8 463 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 LRRC2Q9BYS8 371 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 LY75O60449 1722 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 ADD2P35612 726 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 KRT27Q7Z3Y8 459 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 DDX60Q8IY21 1712 aaKnown RBP21.96■■□□□ 1.11
COL20A1-205ENST00000471582 CNTNAP4Q9C0A0 1308 aa21.96■■□□□ 1.11
COL20A1-205ENST00000471582 PUS7LQ9H0K6 701 aaKnown RBP21.96■■□□□ 1.11
COL20A1-205ENST00000471582 UBE3CQ15386 1083 aa21.95■■□□□ 1.1
COL20A1-205ENST00000471582 CCDC102BQ68D86 513 aa21.95■■□□□ 1.1
COL20A1-205ENST00000471582 TTLL5Q6EMB2 1281 aa21.95■■□□□ 1.1
COL20A1-205ENST00000471582 FERMT3Q86UX7 667 aa21.95■■□□□ 1.1
COL20A1-205ENST00000471582 LINC00116Q8NCU8 138 aa21.95■■□□□ 1.1
COL20A1-205ENST00000471582 NSUN7Q8NE18 718 aaKnown RBP21.95■■□□□ 1.1
COL20A1-205ENST00000471582 ZSCAN16Q9H4T2 348 aaPredicted RBP21.95■■□□□ 1.1
COL20A1-205ENST00000471582 A0A0G2JLW4 131 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 GPAA1O43292 621 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 FGAP02671 866 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 APOBRQ0VD83 1088 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 FAM196AQ6ZSG2 479 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 BCL11BQ9C0K0 894 aaPredicted RBP21.94■■□□□ 1.1
COL20A1-205ENST00000471582 WDR19Q8NEZ3 1342 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 NAA16Q6N069 864 aaPredicted RBP21.94■■□□□ 1.1
COL20A1-205ENST00000471582 TTC6Q86TZ1 520 aa21.94■■□□□ 1.1
COL20A1-205ENST00000471582 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
COL20A1-205ENST00000471582 CLEC4GQ6UXB4 293 aa21.93■■□□□ 1.1
COL20A1-205ENST00000471582 NIP7Q9Y221 180 aaKnown RBP eCLIP21.93■■□□□ 1.1
COL20A1-205ENST00000471582 SALL1Q9NSC2 1324 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 SLC5A1P13866 664 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 RESTQ13127 1097 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 CCDC152Q4G0S7 254 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 SLC9C2Q5TAH2 1124 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 H3BQV1 296 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 NTSR2O95665 410 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 HCLS1P14317 486 aaPredicted RBP21.92■■□□□ 1.1
COL20A1-205ENST00000471582 PDIA3P30101 505 aaKnown RBP21.92■■□□□ 1.1
COL20A1-205ENST00000471582 PHKA1P46020 1223 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 UVSSAQ2YD98 709 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 IFFO2Q5TF58 517 aa21.92■■□□□ 1.1
COL20A1-205ENST00000471582 RGL2O15211 777 aa21.91■■□□□ 1.1
COL20A1-205ENST00000471582 CTDNEP1O95476 244 aa21.91■■□□□ 1.1
COL20A1-205ENST00000471582 MCM5P33992 734 aa21.91■■□□□ 1.1
COL20A1-205ENST00000471582 RC3H1Q5TC82 1133 aaKnown RBP21.91■■□□□ 1.1
COL20A1-205ENST00000471582 MPHOSPH8Q99549 860 aa21.91■■□□□ 1.1
COL20A1-205ENST00000471582 PIH1D3Q9NQM4 214 aaKnown RBP21.91■■□□□ 1.1
COL20A1-205ENST00000471582 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
COL20A1-205ENST00000471582 DOCK2Q92608 1830 aa21.91■■□□□ 1.1
COL20A1-205ENST00000471582 PTPDC1A2A3K4 754 aa21.9■■□□□ 1.1
COL20A1-205ENST00000471582 MB21D2Q8IYB1 491 aaPredicted RBP21.9■■□□□ 1.1
COL20A1-205ENST00000471582 NCOA7Q8NI08 942 aa21.9■■□□□ 1.1
COL20A1-205ENST00000471582 SPATA32Q96LK8 384 aa21.9■■□□□ 1.1
COL20A1-205ENST00000471582 ZNF213O14771 459 aa21.9■■□□□ 1.1
COL20A1-205ENST00000471582 DDX11Q96FC9 970 aa21.9■■□□□ 1.1
COL20A1-205ENST00000471582 FAM177BA6PVY3 158 aa21.89■■□□□ 1.09
COL20A1-205ENST00000471582 FAM173BQ6P4H8 233 aa21.89■■□□□ 1.09
COL20A1-205ENST00000471582 RNF214Q8ND24 703 aa21.89■■□□□ 1.09
COL20A1-205ENST00000471582 LEO1Q8WVC0 666 aaPredicted RBP21.89■■□□□ 1.09
COL20A1-205ENST00000471582 TAF1LQ8IZX4 1826 aa21.89■■□□□ 1.09
COL20A1-205ENST00000471582 IDH1O75874 414 aaKnown RBP21.88■■□□□ 1.09
COL20A1-205ENST00000471582 PDE6AP16499 860 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 KCNQ4P56696 695 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 ZSCAN30Q86W11 494 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 FUCA2Q9BTY2 467 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 CFAP45Q9UL16 551 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 SCN7AQ01118 1682 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 ZMYM6O95789 1325 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 MYH15Q9Y2K3 1946 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 TCRBV5S4A2TA0A5A2 114 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 IGHMBP2P38935 993 aaKnown RBP21.88■■□□□ 1.09
COL20A1-205ENST00000471582 HAND2P61296 217 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 RALYLQ86SE5 291 aaKnown RBP21.88■■□□□ 1.09
COL20A1-205ENST00000471582 SPATA5Q8NB90 893 aa21.88■■□□□ 1.09
COL20A1-205ENST00000471582 ZNF532Q9HCE3 1301 aa21.87■■□□□ 1.09
COL20A1-205ENST00000471582 MYO5AQ9Y4I1 1855 aaKnown RBP21.87■■□□□ 1.09
COL20A1-205ENST00000471582 PRC1O43663 620 aa21.87■■□□□ 1.09
COL20A1-205ENST00000471582 ATL3Q6DD88 541 aa21.87■■□□□ 1.09
COL20A1-205ENST00000471582 DHX16O60231 1041 aaKnown RBP21.86■■□□□ 1.09
COL20A1-205ENST00000471582 RPS6KA4O75676 772 aa21.86■■□□□ 1.09
COL20A1-205ENST00000471582 CCT2P78371 535 aaKnown RBP21.86■■□□□ 1.09
COL20A1-205ENST00000471582 CHST3Q7LGC8 479 aa21.86■■□□□ 1.09
COL20A1-205ENST00000471582 HELBQ8NG08 1087 aaPredicted RBP21.86■■□□□ 1.09
COL20A1-205ENST00000471582 SEC31BQ9NQW1 1179 aa21.86■■□□□ 1.09
COL20A1-205ENST00000471582 GOLGA6L4A6NEF3 574 aa21.86■■□□□ 1.09
COL20A1-205ENST00000471582 ALX1Q15699 326 aa21.86■■□□□ 1.09
COL20A1-205ENST00000471582 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms