RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 INTS5Q6P9B9 1019 aaKnown RBP4.22□□□□□ -1.73
COMMD3-209ENST00000471350 BEND4Q6ZU67 534 aa4.22□□□□□ -1.73
COMMD3-209ENST00000471350 ZKSCAN3Q9BRR0 538 aa4.22□□□□□ -1.73
COMMD3-209ENST00000471350 RNF208Q9H0X6 261 aa4.22□□□□□ -1.73
COMMD3-209ENST00000471350 LOC100289279A0A1B0GTE1 492 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 EREGO14944 169 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 F13BP05160 661 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 RPLP1P05386 114 aaKnown RBP4.21□□□□□ -1.74
COMMD3-209ENST00000471350 PCSK2P16519 638 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 MPSTP25325 297 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 MZF1P28698 734 aaPredicted RBP4.21□□□□□ -1.74
COMMD3-209ENST00000471350 EIF1AXP47813 144 aaKnown RBP4.21□□□□□ -1.74
COMMD3-209ENST00000471350 IRAK1P51617 712 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 SGO2Q562F6 1265 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 PHLDB3Q6NSJ2 640 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 GATA6Q92908 595 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 RUSC1Q9BVN2 902 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 BHLHE41Q9C0J9 482 aaPredicted RBP4.21□□□□□ -1.74
COMMD3-209ENST00000471350 SUGCTQ9HAC7 445 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 HIF3AQ9Y2N7 669 aa4.21□□□□□ -1.74
COMMD3-209ENST00000471350 TNFRSF21O75509 655 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 CTSBP07858 339 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 CES1P23141 567 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 SSFA2P28290 1259 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 DNM1Q05193 864 aaKnown RBP4.2□□□□□ -1.74
COMMD3-209ENST00000471350 C19orf57Q0VDD7 668 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 MTMR3Q13615 1198 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 FAM117BQ6P1L5 589 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 SMG8Q8ND04 991 aaKnown RBP4.2□□□□□ -1.74
COMMD3-209ENST00000471350 LATS2Q9NRM7 1088 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 POLIQ9UNA4 740 aa4.2□□□□□ -1.74
COMMD3-209ENST00000471350 PAX4O43316 350 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 FZD6O60353 706 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 PRNPP04156 253 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 ESRRAP11474 423 aaPredicted RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 MAP4P27816 1152 aaKnown RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 ADMP35318 185 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 NOM1Q5C9Z4 860 aaKnown RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 CDPF1Q6NVV7 123 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 CBLL1Q75N03 491 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 WFDC3Q8IUB2 231 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 C2CD4AQ8NCU7 369 aaPredicted RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 GTF3C2Q8WUA4 911 aaPredicted RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 SLC7A3Q8WY07 619 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 BSNDQ8WZ55 320 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 MFSD14AQ96MC6 490 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 OSMRQ99650 979 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
COMMD3-209ENST00000471350 SOX17Q9H6I2 414 aaPredicted RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 FOXD3Q9UJU5 478 aaPredicted RBP4.19□□□□□ -1.74
COMMD3-209ENST00000471350 WDR64B1ANS9 1081 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 DRD2P14416 443 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 GRIK1P39086 918 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 ECM1Q16610 540 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 ABI1Q8IZP0 508 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 GJD3Q8N144 294 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 EZH1Q92800 747 aaPredicted RBP4.18□□□□□ -1.74
COMMD3-209ENST00000471350 PIM2Q9P1W9 311 aa4.18□□□□□ -1.74
COMMD3-209ENST00000471350 METTL12A8MUP2 240 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 WNT11O96014 354 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 FOSL1P15407 271 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 TXKP42681 527 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 CABP4P57796 275 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 IKBKEQ14164 716 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 C8orf34Q49A92 452 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 FDX2Q6P4F2 183 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 KCNF1Q9H3M0 494 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 CCDC39Q9UFE4 941 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 MTMR7Q9Y216 660 aa4.17□□□□□ -1.74
COMMD3-209ENST00000471350 ARID1BQ8NFD5 2236 aaPredicted RBP4.17□□□□□ -1.74
COMMD3-209ENST00000471350 SART1O43290 800 aaKnown RBP4.16□□□□□ -1.74
COMMD3-209ENST00000471350 ZNF423Q2M1K9 1284 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 SEZ6L2Q6UXD5 910 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 PMEPA1Q969W9 287 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 TCF12Q99081 682 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 GSX1Q9H4S2 264 aaPredicted RBP4.16□□□□□ -1.74
COMMD3-209ENST00000471350 CCDC87Q9NVE4 849 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 PRKAG2Q9UGJ0 569 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 RNF114Q9Y508 228 aa4.16□□□□□ -1.74
COMMD3-209ENST00000471350 CARNS1A5YM72 827 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 PHACTR2O75167 634 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 ITGB5P18084 799 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 GRIA4P48058 902 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 SOX4Q06945 474 aaPredicted RBP4.15□□□□□ -1.75
COMMD3-209ENST00000471350 AAMPQ13685 434 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 ALKBH2Q6NS38 261 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 ZAR1Q86SH2 424 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 C12orf50Q8NA57 414 aaPredicted RBP4.15□□□□□ -1.75
COMMD3-209ENST00000471350 SNX29Q8TEQ0 813 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 FBLIM1Q8WUP2 373 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 TRIM56Q9BRZ2 755 aaKnown RBP4.15□□□□□ -1.75
COMMD3-209ENST00000471350 USP26Q9BXU7 913 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 ZFYVE28Q9HCC9 887 aa4.15□□□□□ -1.75
COMMD3-209ENST00000471350 FAM95CA0A1B0GW59 222 aa4.14□□□□□ -1.75
COMMD3-209ENST00000471350 ARID3CA6NKF2 412 aa4.14□□□□□ -1.75
COMMD3-209ENST00000471350 FAM170BA6NMN3 283 aa4.14□□□□□ -1.75
COMMD3-209ENST00000471350 GAS2O43903 313 aaKnown RBP4.14□□□□□ -1.75
COMMD3-209ENST00000471350 PPP1R15AO75807 674 aaPredicted RBP4.14□□□□□ -1.75
COMMD3-209ENST00000471350 ECEL1O95672 775 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms