RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
LDHB-206ENST00000470985 FAM208AQ9UK61 1670 aaKnown RBP10.11□□□□□ -0.79
LDHB-206ENST00000470985 TTC21BQ7Z4L5 1316 aa10.1□□□□□ -0.79
LDHB-206ENST00000470985 ERVH48-1M5A8F1 160 aa10.1□□□□□ -0.79
LDHB-206ENST00000470985 SRPK2P78362 688 aaKnown RBP10.1□□□□□ -0.79
LDHB-206ENST00000470985 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
LDHB-206ENST00000470985 CST9Q5W186 159 aa10.1□□□□□ -0.79
LDHB-206ENST00000470985 AGBL1Q96MI9 1066 aa10.1□□□□□ -0.79
LDHB-206ENST00000470985 SCN4AP35499 1836 aa10.1□□□□□ -0.79
LDHB-206ENST00000470985 EPHX2P34913 555 aa10.09□□□□□ -0.79
LDHB-206ENST00000470985 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
LDHB-206ENST00000470985 LTV1Q96GA3 475 aaPredicted RBP10.09□□□□□ -0.79
LDHB-206ENST00000470985 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
LDHB-206ENST00000470985 ZNF395Q9H8N7 513 aaPredicted RBP10.09□□□□□ -0.79
LDHB-206ENST00000470985 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
LDHB-206ENST00000470985 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
LDHB-206ENST00000470985 DICER1Q9UPY3 1922 aaKnown RBP10.08□□□□□ -0.8
LDHB-206ENST00000470985 TRAF5O00463 557 aa10.08□□□□□ -0.8
LDHB-206ENST00000470985 PTSQ03393 145 aa10.08□□□□□ -0.8
LDHB-206ENST00000470985 CTU1Q7Z7A3 348 aaKnown RBP10.08□□□□□ -0.8
LDHB-206ENST00000470985 LTN1O94822 1766 aa10.08□□□□□ -0.8
LDHB-206ENST00000470985 LAMA3Q16787 3333 aa10.08□□□□□ -0.8
LDHB-206ENST00000470985 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 ADH1AP07327 375 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 PIGBQ92521 554 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 INSM2Q96T92 566 aaPredicted RBP10.07□□□□□ -0.8
LDHB-206ENST00000470985 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
LDHB-206ENST00000470985 HACL1Q9UJ83 578 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 RTCBQ9Y3I0 505 aaKnown RBP10.07□□□□□ -0.8
LDHB-206ENST00000470985 NDUFB9Q9Y6M9 179 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 RNF123Q5XPI4 1314 aa10.07□□□□□ -0.8
LDHB-206ENST00000470985 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
LDHB-206ENST00000470985 DLEC1Q9Y238 1755 aa10.06□□□□□ -0.8
LDHB-206ENST00000470985 CEP290O15078 2479 aa10.06□□□□□ -0.8
LDHB-206ENST00000470985 ESPNB1AK53 854 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
LDHB-206ENST00000470985 RFC4P35249 363 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 PTGIRP43119 386 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 NR1H3Q13133 447 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 SAPCD2Q86UD0 394 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 CCDC155Q8N6L0 562 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
LDHB-206ENST00000470985 FBXO45P0C2W1 286 aa10.04□□□□□ -0.8
LDHB-206ENST00000470985 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
LDHB-206ENST00000470985 RAPGEFL1Q9UHV5 662 aa10.04□□□□□ -0.8
LDHB-206ENST00000470985 HTTP42858 3142 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 ITGB4P16144 1822 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 C21orf2O43822 256 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 FER1L6Q2WGJ9 1857 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 PNMA8AQ86V59 439 aaPredicted RBP10.03□□□□□ -0.8
LDHB-206ENST00000470985 TAOK3Q9H2K8 898 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 SCN11AQ9UI33 1791 aa10.03□□□□□ -0.8
LDHB-206ENST00000470985 USP31Q70CQ4 1352 aa10.02□□□□□ -0.8
LDHB-206ENST00000470985 CARMIL3Q8ND23 1372 aa10.02□□□□□ -0.8
LDHB-206ENST00000470985 LYSMD3Q7Z3D4 306 aa10.02□□□□□ -0.81
LDHB-206ENST00000470985 C2CD5Q86YS7 1000 aa10.02□□□□□ -0.81
LDHB-206ENST00000470985 NLRP3Q96P20 1036 aa10.02□□□□□ -0.81
LDHB-206ENST00000470985 ASAP1Q9ULH1 1129 aa10.02□□□□□ -0.81
LDHB-206ENST00000470985 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
LDHB-206ENST00000470985 KDRP35968 1356 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 LILRA1O75019 489 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 TRPA1O75762 1119 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 SLC4A9Q96Q91 983 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 SAGE1Q9NXZ1 904 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 LTBP3Q9NS15 1303 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 CENPFP49454 3210 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
LDHB-206ENST00000470985 CDC14CA4D256 554 aa10□□□□□ -0.81
LDHB-206ENST00000470985 CYP27B1O15528 508 aa10□□□□□ -0.81
LDHB-206ENST00000470985 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
LDHB-206ENST00000470985 RNF186Q9NXI6 227 aa10□□□□□ -0.81
LDHB-206ENST00000470985 USP42Q9H9J4 1324 aaKnown RBP10□□□□□ -0.81
LDHB-206ENST00000470985 INSRP06213 1382 aa10□□□□□ -0.81
LDHB-206ENST00000470985 TRPM7Q96QT4 1865 aa10□□□□□ -0.81
LDHB-206ENST00000470985 CACNA1AO00555 2505 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 SLC35F4A4IF30 521 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 MEN1O00255 615 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 CELF2O95319 508 aaKnown RBP9.99□□□□□ -0.81
LDHB-206ENST00000470985 TM4SF1P30408 202 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 NOGQ13253 232 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 CC2D2BQ6DHV5 1058 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 PCDH11XQ9BZA7 1347 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 PCDH11YQ9BZA8 1340 aa9.99□□□□□ -0.81
LDHB-206ENST00000470985 CD163L1Q9NR16 1453 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 H0YGN5 161 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 RPS6KA4O75676 772 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 ITGA6P23229 1130 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 AKAP4Q5JQC9 854 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 FOXR1Q6PIV2 292 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 NME9Q86XW9 330 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 SYNE4Q8N205 404 aa9.98□□□□□ -0.81
LDHB-206ENST00000470985 RNF217Q8TC41 542 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms