RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
LDHB-205ENST00000470280 FGFR2P21802 821 aa13.12□□□□□ -0.31
LDHB-205ENST00000470280 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
LDHB-205ENST00000470280 MTX1Q13505 466 aa13.12□□□□□ -0.31
LDHB-205ENST00000470280 SCARF1Q14162 830 aa13.12□□□□□ -0.31
LDHB-205ENST00000470280 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
LDHB-205ENST00000470280 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
LDHB-205ENST00000470280 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
LDHB-205ENST00000470280 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
LDHB-205ENST00000470280 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
LDHB-205ENST00000470280 ADM5C9JUS6 153 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 CDC37L1Q7L3B6 337 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
LDHB-205ENST00000470280 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 PANK1Q8TE04 598 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 COPRSQ9NQ92 184 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 GGA3Q9NZ52 723 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
LDHB-205ENST00000470280 IQSEC3Q9UPP2 1182 aaPredicted RBP13.11□□□□□ -0.31
LDHB-205ENST00000470280 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
LDHB-205ENST00000470280 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 PNMA6EA0A0J9YXQ4 647 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 CIAO1O76071 339 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 SASH1O94885 1247 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 GNAI2P04899 355 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 BCAMP50895 628 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
LDHB-205ENST00000470280 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 PCDHAC2Q9Y5I4 1007 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
LDHB-205ENST00000470280 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
LDHB-205ENST00000470280 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 WNT10BO00744 389 aa13.09□□□□□ -0.31
LDHB-205ENST00000470280 ZBTB7BO15156 539 aaPredicted RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 CELF2O95319 508 aaKnown RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 PUM3Q15397 648 aaKnown RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 GRIK5Q16478 980 aa13.09□□□□□ -0.31
LDHB-205ENST00000470280 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
LDHB-205ENST00000470280 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 DCPSQ96C86 337 aaKnown RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 ZBED3Q96IU2 234 aaPredicted RBP13.09□□□□□ -0.31
LDHB-205ENST00000470280 FBXO3Q9UK99 471 aa13.09□□□□□ -0.31
LDHB-205ENST00000470280 RASSF10A6NK89 507 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.32
LDHB-205ENST00000470280 VEGFBP49765 207 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
LDHB-205ENST00000470280 OGFOD1Q8N543 542 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 LPIN2Q92539 896 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 ZNF408Q9H9D4 720 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 CEP126Q9P2H0 1117 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 AOX1Q06278 1338 aa13.08□□□□□ -0.32
LDHB-205ENST00000470280 IFIT1P09914 478 aaKnown RBP13.07□□□□□ -0.32
LDHB-205ENST00000470280 CHAF1AQ13111 956 aaPredicted RBP13.07□□□□□ -0.32
LDHB-205ENST00000470280 ATP2B3Q16720 1220 aa13.07□□□□□ -0.32
LDHB-205ENST00000470280 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
LDHB-205ENST00000470280 MFSD14BQ5SR56 506 aa13.07□□□□□ -0.32
LDHB-205ENST00000470280 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
LDHB-205ENST00000470280 TLL2Q9Y6L7 1015 aa13.07□□□□□ -0.32
LDHB-205ENST00000470280 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
LDHB-205ENST00000470280 SLC5A1P13866 664 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 ADORA1P30542 326 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 TFCP2Q12800 502 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 DEFB115Q30KQ5 88 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 VPS37DQ86XT2 251 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 SULF1Q8IWU6 871 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 HDAC9Q9UKV0 1011 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 TRPM7Q96QT4 1865 aa13.06□□□□□ -0.32
LDHB-205ENST00000470280 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
LDHB-205ENST00000470280 TIMM10P62072 90 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 ATP8B2P98198 1209 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 CYP4F22Q6NT55 531 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
LDHB-205ENST00000470280 PHKA1P46020 1223 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 MMP14P50281 582 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 DLGAP5Q15398 846 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 MTMR14Q8NCE2 650 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 PRMT6Q96LA8 375 aaPredicted RBP13.04□□□□□ -0.32
LDHB-205ENST00000470280 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
LDHB-205ENST00000470280 COG6Q9Y2V7 657 aa13.04□□□□□ -0.32
LDHB-205ENST00000470280 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
LDHB-205ENST00000470280 FRAT2O75474 233 aaPredicted RBP13.03□□□□□ -0.32
LDHB-205ENST00000470280 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
LDHB-205ENST00000470280 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
LDHB-205ENST00000470280 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
LDHB-205ENST00000470280 WDR33Q9C0J8 1336 aaKnown RBP13.03□□□□□ -0.32
LDHB-205ENST00000470280 A0A1B0GUL7 405 aa13.02□□□□□ -0.33
LDHB-205ENST00000470280 HSPA1AP0DMV8 641 aaKnown RBP13.02□□□□□ -0.33
LDHB-205ENST00000470280 HSPA1BP0DMV9 641 aaKnown RBP13.02□□□□□ -0.33
LDHB-205ENST00000470280 GRM1Q13255 1194 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms