RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TMEM87AQ8NBN3 555 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 EAF2Q96CJ1 260 aaPredicted RBP9.51□□□□□ -0.89
SMC4-212ENST00000470240 AK7Q96M32 723 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 PPP1R9BQ96SB3 815 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 TSPY26PQ9H489 355 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 CWC25Q9NXE8 425 aaPredicted RBP9.51□□□□□ -0.89
SMC4-212ENST00000470240 CHMP3Q9Y3E7 222 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 FPGT-TNNI3KV9GXZ4 949 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 EVA1CP58658 441 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 UBE2HP62256 183 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 CCDC183Q5T5S1 534 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 GPT2Q8TD30 523 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 CABLES1Q8TDN4 633 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 MAP4K1Q92918 833 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 KAZALD1Q96I82 304 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 TEX13AQ9BXU3 409 aaPredicted RBP9.5□□□□□ -0.89
SMC4-212ENST00000470240 FAM217BQ9NTX9 383 aaPredicted RBP9.5□□□□□ -0.89
SMC4-212ENST00000470240 KIF3AQ9Y496 699 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 UBR2Q8IWV8 1755 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 MED23Q9ULK4 1368 aa9.5□□□□□ -0.89
SMC4-212ENST00000470240 SYCE3A1L190 88 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 SLC27A2O14975 620 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 KDM4AO75164 1064 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 ADH1BP00325 375 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 F13A1P00488 732 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 HMGB1P09429 215 aaKnown RBP9.49□□□□□ -0.89
SMC4-212ENST00000470240 IL15P40933 162 aaPredicted RBP9.49□□□□□ -0.89
SMC4-212ENST00000470240 FGD1P98174 961 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 PTH1RQ03431 593 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 NECTIN1Q15223 517 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 AMHR2Q16671 573 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 MORN1Q5T089 497 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 KIF6Q6ZMV9 814 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 CCDC83Q8IWF9 413 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 CCDC191Q8NCU4 936 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 DDX17Q92841 729 aaKnown RBP9.49□□□□□ -0.89
SMC4-212ENST00000470240 CARD10Q9BWT7 1032 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 IL25Q9H293 177 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 GPR108Q9NPR9 543 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 SPEF2Q9C093 1822 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 PAPPAQ13219 1627 aa9.49□□□□□ -0.89
SMC4-212ENST00000470240 RPAP1Q9BWH6 1393 aaPredicted RBP9.49□□□□□ -0.89
SMC4-212ENST00000470240 NUP188Q5SRE5 1749 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 COL5A2P05997 1499 aaPredicted RBP9.48□□□□□ -0.89
SMC4-212ENST00000470240 SYT1P21579 422 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 GJB2P29033 226 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 TFCP2Q12800 502 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 BRINP3Q76B58 766 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 ZSCAN30Q86W11 494 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 FAM227BQ96M60 508 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 SPSB2Q99619 263 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 HAUS7Q99871 368 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 ALDH8A1Q9H2A2 487 aaPredicted RBP9.48□□□□□ -0.89
SMC4-212ENST00000470240 ATG3Q9NT62 314 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 TMEM63CQ9P1W3 806 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 CCDC39Q9UFE4 941 aa9.48□□□□□ -0.89
SMC4-212ENST00000470240 VPS37CA5D8V6 355 aaPredicted RBP9.47□□□□□ -0.89
SMC4-212ENST00000470240 GOLGA6L4A6NEF3 574 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 ATP5J2-PTCD1G3V325 749 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 H7C1W4 665 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 PTCD1O75127 700 aaKnown RBP9.47□□□□□ -0.89
SMC4-212ENST00000470240 CIAO1O76071 339 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 HSP90B1P14625 803 aaKnown RBP9.47□□□□□ -0.89
SMC4-212ENST00000470240 RPS6KB1P23443 525 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 KRT85P78386 507 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 PTPN12Q05209 780 aaKnown RBP9.47□□□□□ -0.89
SMC4-212ENST00000470240 UVSSAQ2YD98 709 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 TSGA10IPQ3SY00 556 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 MCMDC2Q4G0Z9 681 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 TAF7LQ5H9L4 462 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 LMBR1LQ6UX01 489 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 USP48Q86UV5 1035 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
SMC4-212ENST00000470240 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 SLC6A16Q9GZN6 736 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 RRAGDQ9NQL2 400 aaPredicted RBP9.47□□□□□ -0.89
SMC4-212ENST00000470240 HELLSQ9NRZ9 838 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 TMOD3Q9NYL9 352 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 ABCA3Q99758 1704 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 PALLDQ8WX93 1383 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 JCADQ9P266 1359 aa9.47□□□□□ -0.89
SMC4-212ENST00000470240 A0A0D9SFI3 127 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 TRIM66O15016 1216 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 FIBPO43427 364 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 FMNL1O95466 1100 aaPredicted RBP9.46□□□□□ -0.9
SMC4-212ENST00000470240 S1PR4O95977 384 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 PTMAP06454 111 aaKnown RBP9.46□□□□□ -0.9
SMC4-212ENST00000470240 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.9
SMC4-212ENST00000470240 MCM5P33992 734 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 RFX5P48382 616 aaPredicted RBP9.46□□□□□ -0.9
SMC4-212ENST00000470240 USP46P62068 366 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 CCDC57Q2TAC2 916 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 GORABQ5T7V8 394 aa9.46□□□□□ -0.9
SMC4-212ENST00000470240 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
SMC4-212ENST00000470240 GIGYF2Q6Y7W6 1299 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms