RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.35
LIMS2-213ENST00000469300 SAMM50Q9Y512 469 aa17.27■□□□□ 0.35
LIMS2-213ENST00000469300 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
LIMS2-213ENST00000469300 NEMFO60524 1076 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 RAB11FIP4Q86YS3 637 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 KBTBD3Q8NAB2 608 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 SYNMO15061 1565 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 TRIM75PA6NK02 468 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 SMARCC2Q8TAQ2 1214 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 ADCY10Q96PN6 1610 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 TBCAO75347 108 aaKnown RBP17.26■□□□□ 0.35
LIMS2-213ENST00000469300 USP8P40818 1118 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 NAP1L4Q99733 375 aaKnown RBP17.26■□□□□ 0.35
LIMS2-213ENST00000469300 SYKP43405 635 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 KLHL40Q2TBA0 621 aa17.26■□□□□ 0.35
LIMS2-213ENST00000469300 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
LIMS2-213ENST00000469300 KDRP35968 1356 aa17.25■□□□□ 0.35
LIMS2-213ENST00000469300 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
LIMS2-213ENST00000469300 ERLIN1O75477 346 aa17.25■□□□□ 0.35
LIMS2-213ENST00000469300 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
LIMS2-213ENST00000469300 RUFY3Q7L099 469 aa17.25■□□□□ 0.35
LIMS2-213ENST00000469300 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
LIMS2-213ENST00000469300 SPDYE3A6NKU9 549 aa17.24■□□□□ 0.35
LIMS2-213ENST00000469300 MTIF2P46199 727 aaKnown RBP17.24■□□□□ 0.35
LIMS2-213ENST00000469300 ZNF772Q68DY9 489 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-213ENST00000469300 ATL3Q6DD88 541 aa17.24■□□□□ 0.35
LIMS2-213ENST00000469300 USP37Q86T82 979 aa17.24■□□□□ 0.35
LIMS2-213ENST00000469300 ABCC4O15439 1325 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-213ENST00000469300 GSDMDP57764 484 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 GDPD2Q9HCC8 539 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 PLA2R1Q13018 1463 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
LIMS2-213ENST00000469300 YEATS4O95619 227 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 UVSSAQ2YD98 709 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 USP26Q9BXU7 913 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
LIMS2-213ENST00000469300 ERBB3P21860 1342 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 SPAG1Q07617 926 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-213ENST00000469300 MAP3K4Q9Y6R4 1608 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 LOC102724428A0A0B4J2F2 783 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 ZNF165P49910 485 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
LIMS2-213ENST00000469300 SIK1P57059 783 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 FAM196AQ6ZSG2 479 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-213ENST00000469300 AK2P54819 239 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 CTSWP56202 376 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 NLGN1Q8N2Q7 840 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 KDM6BO15054 1643 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 F13A1P00488 732 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 LARGE2Q8N3Y3 721 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
LIMS2-213ENST00000469300 ATP5JP18859 108 aa17.21■□□□□ 0.35
LIMS2-213ENST00000469300 CHMP4BP1P59074 171 aa17.21■□□□□ 0.35
LIMS2-213ENST00000469300 SYCP3Q8IZU3 236 aa17.21■□□□□ 0.35
LIMS2-213ENST00000469300 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
LIMS2-213ENST00000469300 A2ML1A8K2U0 1454 aa17.21■□□□□ 0.35
LIMS2-213ENST00000469300 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
LIMS2-213ENST00000469300 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
LIMS2-213ENST00000469300 PARP1P09874 1014 aaKnown RBP17.21■□□□□ 0.34
LIMS2-213ENST00000469300 KRT2P35908 639 aa17.21■□□□□ 0.34
LIMS2-213ENST00000469300 THRAP3Q9Y2W1 955 aaKnown RBP17.21■□□□□ 0.34
LIMS2-213ENST00000469300 STAT6P42226 847 aa17.2■□□□□ 0.34
LIMS2-213ENST00000469300 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-213ENST00000469300 QTRT2Q9H974 415 aaKnown RBP17.2■□□□□ 0.34
LIMS2-213ENST00000469300 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
LIMS2-213ENST00000469300 GPAA1O43292 621 aa17.2■□□□□ 0.34
LIMS2-213ENST00000469300 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
LIMS2-213ENST00000469300 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
LIMS2-213ENST00000469300 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 SGSM2O43147 1006 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-213ENST00000469300 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 PANK2Q9BZ23 570 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 ARHGEF10LQ9HCE6 1279 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 PTPDC1A2A3K4 754 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 SPTLC2O15270 562 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
LIMS2-213ENST00000469300 CALCOCO1Q9P1Z2 691 aa17.19■□□□□ 0.34
LIMS2-213ENST00000469300 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-213ENST00000469300 CLIP2Q9UDT6 1046 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 TCERG1LQ5VWI1 586 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 KIF5CO60282 957 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 CCDC172P0C7W6 258 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 ATP2B4P23634 1241 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 CCDC174Q6PII3 467 aa17.18■□□□□ 0.34
LIMS2-213ENST00000469300 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms