RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 IGF2BP3O00425 579 aaKnown RBP eCLIP24.96■■□□□ 1.59
UPK3B-204ENST00000469114 GCKRQ14397 625 aa24.96■■□□□ 1.59
UPK3B-204ENST00000469114 OTUD7BQ6GQQ9 843 aa24.96■■□□□ 1.59
UPK3B-204ENST00000469114 KIAA0100Q14667 2235 aaKnown RBP24.96■■□□□ 1.59
UPK3B-204ENST00000469114 RBBP6Q7Z6E9 1792 aaKnown RBP24.95■■□□□ 1.59
UPK3B-204ENST00000469114 CSF1RP07333 972 aa24.95■■□□□ 1.58
UPK3B-204ENST00000469114 CERS5Q8N5B7 392 aa24.95■■□□□ 1.58
UPK3B-204ENST00000469114 MYH16Q9H6N6 1097 aa24.95■■□□□ 1.58
UPK3B-204ENST00000469114 POTEFA5A3E0 1075 aa24.94■■□□□ 1.58
UPK3B-204ENST00000469114 CFAP100Q494V2 611 aa24.94■■□□□ 1.58
UPK3B-204ENST00000469114 G2E3Q7L622 706 aa24.94■■□□□ 1.58
UPK3B-204ENST00000469114 HTTP42858 3142 aa24.93■■□□□ 1.58
UPK3B-204ENST00000469114 ANKRD18BA2A2Z9 1011 aa24.93■■□□□ 1.58
UPK3B-204ENST00000469114 SLC4A2P04920 1241 aa24.93■■□□□ 1.58
UPK3B-204ENST00000469114 IREB2P48200 963 aaKnown RBP24.93■■□□□ 1.58
UPK3B-204ENST00000469114 C15orf52Q6ZUT6 534 aaKnown RBP24.93■■□□□ 1.58
UPK3B-204ENST00000469114 TSR2Q969E8 191 aaKnown RBP24.93■■□□□ 1.58
UPK3B-204ENST00000469114 PTPN22Q9Y2R2 807 aa24.93■■□□□ 1.58
UPK3B-204ENST00000469114 CLRN2A0PK11 232 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 SPDYE2BA6NHP3 402 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 F8W031 263 aaPredicted RBP24.92■■□□□ 1.58
UPK3B-204ENST00000469114 SPDYE6P0CI01 402 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 CASP7P55210 303 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 FKBP1AP62942 108 aaKnown RBP24.92■■□□□ 1.58
UPK3B-204ENST00000469114 TWISTNBQ3B726 338 aaPredicted RBP24.92■■□□□ 1.58
UPK3B-204ENST00000469114 HABP4Q5JVS0 413 aaKnown RBP24.92■■□□□ 1.58
UPK3B-204ENST00000469114 ZNF804AQ7Z570 1209 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 CD99L2Q8TCZ2 262 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 VEZTQ9HBM0 779 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 PCDHAC2Q9Y5I4 1007 aa24.92■■□□□ 1.58
UPK3B-204ENST00000469114 IRS2Q9Y4H2 1338 aa24.91■■□□□ 1.58
UPK3B-204ENST00000469114 A0A1B0GUL6 1792 aa24.91■■□□□ 1.58
UPK3B-204ENST00000469114 CRHR2Q13324 411 aa24.91■■□□□ 1.58
UPK3B-204ENST00000469114 EFCC1Q9HA90 598 aa24.91■■□□□ 1.58
UPK3B-204ENST00000469114 SNAP23O00161 211 aa24.9■■□□□ 1.58
UPK3B-204ENST00000469114 TAF5LO75529 589 aa24.9■■□□□ 1.58
UPK3B-204ENST00000469114 IL1R1P14778 569 aa24.9■■□□□ 1.58
UPK3B-204ENST00000469114 FLIIQ13045 1269 aa24.9■■□□□ 1.58
UPK3B-204ENST00000469114 NBPF12Q5TAG4 269 aaPredicted RBP24.9■■□□□ 1.58
UPK3B-204ENST00000469114 ANKRD13AQ8IZ07 590 aa24.9■■□□□ 1.58
UPK3B-204ENST00000469114 HELBQ8NG08 1087 aaPredicted RBP24.89■■□□□ 1.58
UPK3B-204ENST00000469114 LINS1Q8NG48 757 aa24.89■■□□□ 1.58
UPK3B-204ENST00000469114 DNAAF4Q8WXU2 420 aa24.89■■□□□ 1.58
UPK3B-204ENST00000469114 ARMC5Q96C12 935 aa24.89■■□□□ 1.58
UPK3B-204ENST00000469114 PRMT6Q96LA8 375 aaPredicted RBP24.89■■□□□ 1.58
UPK3B-204ENST00000469114 USP2O75604 605 aaPredicted RBP24.88■■□□□ 1.57
UPK3B-204ENST00000469114 GJA5P36382 358 aa24.88■■□□□ 1.57
UPK3B-204ENST00000469114 RBM5P52756 815 aaKnown RBP eCLIP24.88■■□□□ 1.57
UPK3B-204ENST00000469114 SP3Q02447 781 aa24.88■■□□□ 1.57
UPK3B-204ENST00000469114 IFIT5Q13325 482 aaKnown RBP24.88■■□□□ 1.57
UPK3B-204ENST00000469114 FKBP5Q13451 457 aaPredicted RBP24.88■■□□□ 1.57
UPK3B-204ENST00000469114 CACNA1FO60840 1977 aa24.87■■□□□ 1.57
UPK3B-204ENST00000469114 TESPA1A2RU30 521 aaPredicted RBP24.87■■□□□ 1.57
UPK3B-204ENST00000469114 RASA3Q14644 834 aa24.87■■□□□ 1.57
UPK3B-204ENST00000469114 MKI67P46013 3256 aaKnown RBP24.87■■□□□ 1.57
UPK3B-204ENST00000469114 OTOFQ9HC10 1997 aa24.86■■□□□ 1.57
UPK3B-204ENST00000469114 ANP32CO43423 234 aa24.86■■□□□ 1.57
UPK3B-204ENST00000469114 TNFAIP1Q13829 316 aa24.86■■□□□ 1.57
UPK3B-204ENST00000469114 CHMP3Q9Y3E7 222 aa24.86■■□□□ 1.57
UPK3B-204ENST00000469114 PTPN18Q99952 460 aa24.85■■□□□ 1.57
UPK3B-204ENST00000469114 JAG2Q9Y219 1238 aa24.85■■□□□ 1.57
UPK3B-204ENST00000469114 CENPFP49454 3210 aa24.84■■□□□ 1.57
UPK3B-204ENST00000469114 EN2P19622 333 aaPredicted RBP24.84■■□□□ 1.57
UPK3B-204ENST00000469114 ARHGEF6Q15052 776 aa24.84■■□□□ 1.57
UPK3B-204ENST00000469114 CCDC27Q2M243 656 aa24.84■■□□□ 1.57
UPK3B-204ENST00000469114 OPTNQ96CV9 577 aa24.84■■□□□ 1.57
UPK3B-204ENST00000469114 TMEM106CQ9BVX2 250 aa24.84■■□□□ 1.57
UPK3B-204ENST00000469114 AOX1Q06278 1338 aa24.84■■□□□ 1.57
UPK3B-204ENST00000469114 ELP3Q9H9T3 547 aa24.83■■□□□ 1.57
UPK3B-204ENST00000469114 FOXO4P98177 505 aa24.82■■□□□ 1.56
UPK3B-204ENST00000469114 FAM205AQ6ZU69 1335 aa24.82■■□□□ 1.56
UPK3B-204ENST00000469114 SPDYE2Q495Y8 402 aa24.81■■□□□ 1.56
UPK3B-204ENST00000469114 WWC1Q8IX03 1113 aa24.81■■□□□ 1.56
UPK3B-204ENST00000469114 ZNF70Q9UC06 446 aaPredicted RBP24.81■■□□□ 1.56
UPK3B-204ENST00000469114 IL16Q14005 1332 aa24.81■■□□□ 1.56
UPK3B-204ENST00000469114 PLIN1O60240 522 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 CCDC57Q2TAC2 916 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 TAF7LQ5H9L4 462 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 LDHAL6AQ6ZMR3 332 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 NBPF11Q86T75 865 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 ZNF333Q96JL9 665 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 ZFYVE28Q9HCC9 887 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 SERPINA10Q9UK55 444 aa24.8■■□□□ 1.56
UPK3B-204ENST00000469114 CAP1Q01518 475 aa24.79■■□□□ 1.56
UPK3B-204ENST00000469114 TAF1CQ15572 869 aaPredicted RBP24.79■■□□□ 1.56
UPK3B-204ENST00000469114 MFSD14BQ5SR56 506 aa24.79■■□□□ 1.56
UPK3B-204ENST00000469114 MS4A4AQ96JQ5 239 aa24.79■■□□□ 1.56
UPK3B-204ENST00000469114 CNNM1Q9NRU3 951 aa24.79■■□□□ 1.56
UPK3B-204ENST00000469114 TTF2Q9UNY4 1162 aaKnown RBP24.79■■□□□ 1.56
UPK3B-204ENST00000469114 CCL15-CCL14A0A0B4J2E2 113 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 GTF2A2P52657 109 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 CCL15Q16663 113 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 SLC9C1Q4G0N8 1177 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 LMBR1LQ6UX01 489 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 BRI3BPQ8WY22 251 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 TDRD3Q9H7E2 651 aaKnown RBP24.78■■□□□ 1.56
UPK3B-204ENST00000469114 ARAP2Q8WZ64 1704 aa24.78■■□□□ 1.56
UPK3B-204ENST00000469114 BRCA2P51587 3418 aa24.77■■□□□ 1.56
UPK3B-204ENST00000469114 TNNI2P48788 182 aa24.77■■□□□ 1.56
UPK3B-204ENST00000469114 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms