RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 CREBRFQ8IUR6 639 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 HELLSQ9NRZ9 838 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 MRVI1Q9Y6F6 885 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 MAGEB6Q8N7X4 407 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 TRMT1Q9NXH9 659 aaKnown RBP20.37■□□□□ 0.85
TRIM46-207ENST00000468878 CTNNA3Q9UI47 895 aa20.37■□□□□ 0.85
TRIM46-207ENST00000468878 hCG_1642624A0A1W2PR95 340 aa20.36■□□□□ 0.85
TRIM46-207ENST00000468878 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
TRIM46-207ENST00000468878 MCAMP43121 646 aa20.36■□□□□ 0.85
TRIM46-207ENST00000468878 MCM5P33992 734 aa20.36■□□□□ 0.85
TRIM46-207ENST00000468878 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
TRIM46-207ENST00000468878 ARMT1Q9H993 441 aa20.36■□□□□ 0.85
TRIM46-207ENST00000468878 UBE2Q2LH0YL09 131 aa20.35■□□□□ 0.85
TRIM46-207ENST00000468878 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
TRIM46-207ENST00000468878 WWC3Q9ULE0 1092 aa20.35■□□□□ 0.85
TRIM46-207ENST00000468878 NCOA7Q8NI08 942 aa20.35■□□□□ 0.85
TRIM46-207ENST00000468878 NAPBQ9H115 298 aa20.35■□□□□ 0.85
TRIM46-207ENST00000468878 ZNF532Q9HCE3 1301 aa20.35■□□□□ 0.85
TRIM46-207ENST00000468878 SMC2O95347 1197 aa20.34■□□□□ 0.85
TRIM46-207ENST00000468878 CTDNEP1O95476 244 aa20.34■□□□□ 0.85
TRIM46-207ENST00000468878 ZNF396Q96N95 335 aaPredicted RBP20.34■□□□□ 0.85
TRIM46-207ENST00000468878 CLIP2Q9UDT6 1046 aa20.34■□□□□ 0.85
TRIM46-207ENST00000468878 ZHX1Q9UKY1 873 aaPredicted RBP20.34■□□□□ 0.85
TRIM46-207ENST00000468878 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
TRIM46-207ENST00000468878 RESTQ13127 1097 aa20.34■□□□□ 0.85
TRIM46-207ENST00000468878 DDX19AQ9NUU7 478 aaKnown RBP20.34■□□□□ 0.85
TRIM46-207ENST00000468878 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
TRIM46-207ENST00000468878 NLRP10Q86W26 655 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 TTLL11Q8NHH1 800 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 CLIC4Q9Y696 253 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 IFIT3O14879 490 aaKnown RBP20.33■□□□□ 0.85
TRIM46-207ENST00000468878 PRKAB2O43741 272 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
TRIM46-207ENST00000468878 ZBTB38Q8NAP3 1195 aaPredicted RBP20.33■□□□□ 0.85
TRIM46-207ENST00000468878 TMEM87AQ8NBN3 555 aa20.33■□□□□ 0.85
TRIM46-207ENST00000468878 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
TRIM46-207ENST00000468878 ARID5BQ14865 1188 aa20.33■□□□□ 0.84
TRIM46-207ENST00000468878 PIH1D3Q9NQM4 214 aaKnown RBP20.33■□□□□ 0.84
TRIM46-207ENST00000468878 PFKFB2O60825 505 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 MBD4O95243 580 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 BCAMP50895 628 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 PDILTQ8N807 584 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 SLC26A6Q9BXS9 759 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 PRDM1O75626 825 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 METAP2P50579 478 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRIM46-207ENST00000468878 C11orf57Q6ZUT1 292 aaPredicted RBP20.32■□□□□ 0.84
TRIM46-207ENST00000468878 AOPEPQ8N6M6 819 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 APPBP2Q92624 585 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 WTIPA6NIX2 430 aaPredicted RBP20.32■□□□□ 0.84
TRIM46-207ENST00000468878 TRIM29Q14134 588 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 UVSSAQ2YD98 709 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 TMEM67Q5HYA8 995 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 GIGYF2Q6Y7W6 1299 aaKnown RBP20.32■□□□□ 0.84
TRIM46-207ENST00000468878 DSCC1Q9BVC3 393 aa20.32■□□□□ 0.84
TRIM46-207ENST00000468878 GOLPH3LQ9H4A5 285 aa20.31■□□□□ 0.84
TRIM46-207ENST00000468878 ZSCAN16Q9H4T2 348 aaPredicted RBP20.31■□□□□ 0.84
TRIM46-207ENST00000468878 CTSWP56202 376 aa20.31■□□□□ 0.84
TRIM46-207ENST00000468878 MAP7D2Q96T17 732 aa20.31■□□□□ 0.84
TRIM46-207ENST00000468878 ALG1Q9BT22 464 aa20.31■□□□□ 0.84
TRIM46-207ENST00000468878 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
TRIM46-207ENST00000468878 TPD52L1Q16890 204 aaPredicted RBP20.3■□□□□ 0.84
TRIM46-207ENST00000468878 CLSTN2Q9H4D0 955 aa20.3■□□□□ 0.84
TRIM46-207ENST00000468878 MED1Q15648 1581 aaPredicted RBP20.3■□□□□ 0.84
TRIM46-207ENST00000468878 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
TRIM46-207ENST00000468878 CPLX2Q6PUV4 134 aaKnown RBP20.3■□□□□ 0.84
TRIM46-207ENST00000468878 KCNB2Q92953 911 aa20.3■□□□□ 0.84
TRIM46-207ENST00000468878 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
TRIM46-207ENST00000468878 PCCAP05165 728 aaPredicted RBP20.29■□□□□ 0.84
TRIM46-207ENST00000468878 HS1BP3Q53T59 392 aa20.29■□□□□ 0.84
TRIM46-207ENST00000468878 DHX16O60231 1041 aaKnown RBP20.29■□□□□ 0.84
TRIM46-207ENST00000468878 ISCA1Q9BUE6 129 aa20.29■□□□□ 0.84
TRIM46-207ENST00000468878 CCDC69A6NI79 296 aa20.29■□□□□ 0.84
TRIM46-207ENST00000468878 GOLGA8AA7E2F4 631 aa20.29■□□□□ 0.84
TRIM46-207ENST00000468878 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
TRIM46-207ENST00000468878 SLC4A9Q96Q91 983 aa20.28■□□□□ 0.84
TRIM46-207ENST00000468878 PCDHA7Q9UN72 937 aa20.28■□□□□ 0.84
TRIM46-207ENST00000468878 SH3TC1Q8TE82 1336 aa20.28■□□□□ 0.84
TRIM46-207ENST00000468878 NKX2-3Q8TAU0 364 aa20.28■□□□□ 0.84
TRIM46-207ENST00000468878 SDR42E1Q8WUS8 393 aa20.28■□□□□ 0.84
TRIM46-207ENST00000468878 PRDM4Q9UKN5 801 aa20.28■□□□□ 0.84
TRIM46-207ENST00000468878 SLC4A4Q9Y6R1 1079 aa20.27■□□□□ 0.84
TRIM46-207ENST00000468878 PDE6AP16499 860 aa20.27■□□□□ 0.84
TRIM46-207ENST00000468878 NDUFA8P51970 172 aa20.27■□□□□ 0.84
TRIM46-207ENST00000468878 DDB1Q16531 1140 aa20.27■□□□□ 0.84
TRIM46-207ENST00000468878 TBC1D10CQ8IV04 446 aa20.27■□□□□ 0.84
TRIM46-207ENST00000468878 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM46-207ENST00000468878 KCNJ14Q9UNX9 436 aa20.27■□□□□ 0.84
TRIM46-207ENST00000468878 V9GYY5 206 aaPredicted RBP20.27■□□□□ 0.84
TRIM46-207ENST00000468878 MARF1Q9Y4F3 1742 aaKnown RBP20.27■□□□□ 0.84
TRIM46-207ENST00000468878 IGHMBP2P38935 993 aaKnown RBP20.27■□□□□ 0.83
TRIM46-207ENST00000468878 PDE8BO95263 885 aa20.26■□□□□ 0.83
TRIM46-207ENST00000468878 LMOD1P29536 600 aaPredicted RBP20.26■□□□□ 0.83
TRIM46-207ENST00000468878 CLIC6Q96NY7 704 aa20.26■□□□□ 0.83
TRIM46-207ENST00000468878 SLC12A7Q9Y666 1083 aa20.26■□□□□ 0.83
TRIM46-207ENST00000468878 GYG1P46976 350 aa20.26■□□□□ 0.83
TRIM46-207ENST00000468878 MAP3K12Q12852 859 aa20.26■□□□□ 0.83
TRIM46-207ENST00000468878 SUSD4Q5VX71 490 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms