RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 PTPN22Q9Y2R2 807 aa22.78■■□□□ 1.24
COPS6-206ENST00000468499 CSF1RP07333 972 aa22.77■■□□□ 1.24
COPS6-206ENST00000468499 CHRNDQ07001 517 aa22.77■■□□□ 1.24
COPS6-206ENST00000468499 CRHR2Q13324 411 aa22.77■■□□□ 1.24
COPS6-206ENST00000468499 CD99L2Q8TCZ2 262 aa22.77■■□□□ 1.24
COPS6-206ENST00000468499 TSR2Q969E8 191 aaKnown RBP22.77■■□□□ 1.24
COPS6-206ENST00000468499 IGHMBP2P38935 993 aaKnown RBP22.76■■□□□ 1.23
COPS6-206ENST00000468499 NBPF12Q5TAG4 269 aaPredicted RBP22.76■■□□□ 1.23
COPS6-206ENST00000468499 SLC10A4Q96EP9 437 aa22.76■■□□□ 1.23
COPS6-206ENST00000468499 PRMT6Q96LA8 375 aaPredicted RBP22.76■■□□□ 1.23
COPS6-206ENST00000468499 CLRN2A0PK11 232 aa22.75■■□□□ 1.23
COPS6-206ENST00000468499 GCKRQ14397 625 aa22.75■■□□□ 1.23
COPS6-206ENST00000468499 ARMC5Q96C12 935 aa22.75■■□□□ 1.23
COPS6-206ENST00000468499 GCC1Q96CN9 775 aa22.75■■□□□ 1.23
COPS6-206ENST00000468499 ARAP2Q8WZ64 1704 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 SPDYE2BA6NHP3 402 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 TAF5LO75529 589 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 USP2O75604 605 aaPredicted RBP22.74■■□□□ 1.23
COPS6-206ENST00000468499 SPDYE6P0CI01 402 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 EN2P19622 333 aaPredicted RBP22.74■■□□□ 1.23
COPS6-206ENST00000468499 INHBEP58166 350 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 DLGAP5Q15398 846 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 CDAN1Q8IWY9 1227 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 ANKRD2Q9GZV1 360 aa22.74■■□□□ 1.23
COPS6-206ENST00000468499 CFAP100Q494V2 611 aa22.73■■□□□ 1.23
COPS6-206ENST00000468499 C15orf52Q6ZUT6 534 aaKnown RBP22.73■■□□□ 1.23
COPS6-206ENST00000468499 HELBQ8NG08 1087 aaPredicted RBP22.73■■□□□ 1.23
COPS6-206ENST00000468499 JAG2Q9Y219 1238 aa22.73■■□□□ 1.23
COPS6-206ENST00000468499 PPP2R3BQ9Y5P8 575 aa22.73■■□□□ 1.23
COPS6-206ENST00000468499 TESPA1A2RU30 521 aaPredicted RBP22.72■■□□□ 1.23
COPS6-206ENST00000468499 F8W031 263 aaPredicted RBP22.72■■□□□ 1.23
COPS6-206ENST00000468499 FXR1P51114 621 aaKnown RBP eCLIP22.72■■□□□ 1.23
COPS6-206ENST00000468499 NEXNQ0ZGT2 675 aa22.72■■□□□ 1.23
COPS6-206ENST00000468499 INTS3Q68E01 1043 aaKnown RBP22.72■■□□□ 1.23
COPS6-206ENST00000468499 IL1R1P14778 569 aa22.71■■□□□ 1.23
COPS6-206ENST00000468499 CALD1Q05682 793 aaKnown RBP22.71■■□□□ 1.23
COPS6-206ENST00000468499 CNKSR2Q8WXI2 1034 aa22.7■■□□□ 1.22
COPS6-206ENST00000468499 ERO1AQ96HE7 468 aa22.7■■□□□ 1.22
COPS6-206ENST00000468499 MPHOSPH8Q99549 860 aa22.7■■□□□ 1.22
COPS6-206ENST00000468499 PRKRIP1Q9H875 184 aaPredicted RBP22.7■■□□□ 1.22
COPS6-206ENST00000468499 PPP1R12BO60237 982 aaPredicted RBP22.69■■□□□ 1.22
COPS6-206ENST00000468499 FOXO4P98177 505 aa22.69■■□□□ 1.22
COPS6-206ENST00000468499 MS4A4AQ96JQ5 239 aa22.69■■□□□ 1.22
COPS6-206ENST00000468499 VEZTQ9HBM0 779 aa22.69■■□□□ 1.22
COPS6-206ENST00000468499 UNCXA6NJT0 531 aa22.68■■□□□ 1.22
COPS6-206ENST00000468499 RASA3Q14644 834 aa22.68■■□□□ 1.22
COPS6-206ENST00000468499 ZNF333Q96JL9 665 aa22.68■■□□□ 1.22
COPS6-206ENST00000468499 EFCC1Q9HA90 598 aa22.68■■□□□ 1.22
COPS6-206ENST00000468499 SLC4A2P04920 1241 aa22.67■■□□□ 1.22
COPS6-206ENST00000468499 KCNJ4P48050 445 aa22.67■■□□□ 1.22
COPS6-206ENST00000468499 FKBP1AP62942 108 aaKnown RBP22.67■■□□□ 1.22
COPS6-206ENST00000468499 SP3Q02447 781 aa22.67■■□□□ 1.22
COPS6-206ENST00000468499 TEPSINQ96N21 525 aa22.67■■□□□ 1.22
COPS6-206ENST00000468499 FLIIQ13045 1269 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 TWISTNBQ3B726 338 aaPredicted RBP22.66■■□□□ 1.22
COPS6-206ENST00000468499 EPHA10Q5JZY3 1008 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.66■■□□□ 1.22
COPS6-206ENST00000468499 ANKRD13AQ8IZ07 590 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 BRI3BPQ8WY22 251 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 OPTNQ96CV9 577 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 ELP3Q9H9T3 547 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 CACNA1FO60840 1977 aa22.66■■□□□ 1.22
COPS6-206ENST00000468499 IREB2P48200 963 aaKnown RBP22.65■■□□□ 1.22
COPS6-206ENST00000468499 SUPT20HL1Q3ZLR7 823 aa22.65■■□□□ 1.22
COPS6-206ENST00000468499 STK31Q9BXU1 1019 aa22.65■■□□□ 1.22
COPS6-206ENST00000468499 PTCH2Q9Y6C5 1203 aa22.65■■□□□ 1.22
COPS6-206ENST00000468499 RANBP2P49792 3224 aaKnown RBP22.65■■□□□ 1.22
COPS6-206ENST00000468499 ANKRD18BA2A2Z9 1011 aa22.64■■□□□ 1.21
COPS6-206ENST00000468499 SPDYE2Q495Y8 402 aa22.64■■□□□ 1.21
COPS6-206ENST00000468499 LINS1Q8NG48 757 aa22.64■■□□□ 1.21
COPS6-206ENST00000468499 DNAAF4Q8WXU2 420 aa22.64■■□□□ 1.21
COPS6-206ENST00000468499 ZNF594Q96JF6 807 aaPredicted RBP22.63■■□□□ 1.21
COPS6-206ENST00000468499 ZNF70Q9UC06 446 aaPredicted RBP22.63■■□□□ 1.21
COPS6-206ENST00000468499 COLQQ9Y215 455 aaPredicted RBP22.63■■□□□ 1.21
COPS6-206ENST00000468499 FAM205AQ6ZU69 1335 aa22.62■■□□□ 1.21
COPS6-206ENST00000468499 GRIK5Q16478 980 aa22.62■■□□□ 1.21
COPS6-206ENST00000468499 CCDC184Q52MB2 194 aa22.62■■□□□ 1.21
COPS6-206ENST00000468499 ZNF804AQ7Z570 1209 aa22.62■■□□□ 1.21
COPS6-206ENST00000468499 FAM43AQ8N2R8 423 aa22.62■■□□□ 1.21
COPS6-206ENST00000468499 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
COPS6-206ENST00000468499 MYO1BO43795 1136 aa22.61■■□□□ 1.21
COPS6-206ENST00000468499 VGLL4Q14135 290 aa22.61■■□□□ 1.21
COPS6-206ENST00000468499 ARHGAP39Q9C0H5 1083 aa22.61■■□□□ 1.21
COPS6-206ENST00000468499 TDRD3Q9H7E2 651 aaKnown RBP22.61■■□□□ 1.21
COPS6-206ENST00000468499 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
COPS6-206ENST00000468499 TMEM39BQ9GZU3 492 aa22.6■■□□□ 1.21
COPS6-206ENST00000468499 MYH16Q9H6N6 1097 aa22.6■■□□□ 1.21
COPS6-206ENST00000468499 CEP290O15078 2479 aa22.6■■□□□ 1.21
COPS6-206ENST00000468499 IFIT5Q13325 482 aaKnown RBP22.59■■□□□ 1.21
COPS6-206ENST00000468499 FKBP5Q13451 457 aaPredicted RBP22.59■■□□□ 1.21
COPS6-206ENST00000468499 OTUD7BQ6GQQ9 843 aa22.59■■□□□ 1.21
COPS6-206ENST00000468499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.59■■□□□ 1.21
COPS6-206ENST00000468499 TDRD7Q8NHU6 1098 aaKnown RBP22.59■■□□□ 1.21
COPS6-206ENST00000468499 TRIOBPQ9H2D6 2365 aa22.58■■□□□ 1.21
COPS6-206ENST00000468499 CCL15-CCL14A0A0B4J2E2 113 aa22.58■■□□□ 1.21
COPS6-206ENST00000468499 F6X3S4 739 aa22.58■■□□□ 1.21
COPS6-206ENST00000468499 RBM5P52756 815 aaKnown RBP eCLIP22.58■■□□□ 1.21
COPS6-206ENST00000468499 CCL15Q16663 113 aa22.58■■□□□ 1.21
COPS6-206ENST00000468499 CCDC27Q2M243 656 aa22.58■■□□□ 1.21
COPS6-206ENST00000468499 BEND3Q5T5X7 828 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms