RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
COL4A6-205ENST00000468338 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
COL4A6-205ENST00000468338 TRIM27P14373 513 aa14□□□□□ -0.17
COL4A6-205ENST00000468338 KLRK1P26718 216 aa14□□□□□ -0.17
COL4A6-205ENST00000468338 HIRAP54198 1017 aaPredicted RBP14□□□□□ -0.17
COL4A6-205ENST00000468338 ATF7IPQ6VMQ6 1270 aa14□□□□□ -0.17
COL4A6-205ENST00000468338 SHTN1A0MZ66 631 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 SNAP23O00161 211 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 TAF5LO75529 589 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-205ENST00000468338 MAP1SQ66K74 1059 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-205ENST00000468338 MICALL2Q8IY33 904 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 CNTROBQ8N137 903 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 AGBL3Q8NEM8 1001 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 HELBQ8NG08 1087 aaPredicted RBP13.99□□□□□ -0.17
COL4A6-205ENST00000468338 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
COL4A6-205ENST00000468338 PUS3Q9BZE2 481 aaKnown RBP13.99□□□□□ -0.17
COL4A6-205ENST00000468338 USP17L3A6NCW0 530 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 USP17L4A6NCW7 530 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 G3V3G9 751 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 H7C1D1 291 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 UBTFL1P0CB47 393 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-205ENST00000468338 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-205ENST00000468338 HTRA3P83110 453 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 TAF7LQ5H9L4 462 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 RSBN1LQ6PCB5 846 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-205ENST00000468338 USP17L1Q7RTZ2 530 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 TRPM4Q8TD43 1214 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 CNNM1Q9NRU3 951 aa13.98□□□□□ -0.17
COL4A6-205ENST00000468338 UBE4AQ14139 1066 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 DACT2Q5SW24 774 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 STRIP1Q5VSL9 837 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 VGLL2Q8N8G2 317 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 MEIS3Q99687 375 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 TNNQ9UQP3 1299 aa13.97□□□□□ -0.17
COL4A6-205ENST00000468338 MROH5Q6ZUA9 1318 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 EGFRP00533 1210 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 TIE1P35590 1138 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 KCNJ4P48050 445 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.17
COL4A6-205ENST00000468338 LRRC24Q50LG9 513 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 PPP1R15BQ5SWA1 713 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 ZKSCAN2Q63HK3 967 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 SAMD7Q7Z3H4 446 aa13.96□□□□□ -0.17
COL4A6-205ENST00000468338 POLR2AP24928 1970 aaKnown RBP13.96□□□□□ -0.18
COL4A6-205ENST00000468338 IL1R1P14778 569 aa13.95□□□□□ -0.18
COL4A6-205ENST00000468338 MTX1Q13505 466 aa13.95□□□□□ -0.18
COL4A6-205ENST00000468338 KLHDC4Q8TBB5 520 aa13.95□□□□□ -0.18
COL4A6-205ENST00000468338 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-205ENST00000468338 KLRG1Q96E93 195 aa13.95□□□□□ -0.18
COL4A6-205ENST00000468338 GPHNQ9NQX3 736 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-205ENST00000468338 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
COL4A6-205ENST00000468338 LRRFIP2Q9Y608 721 aaKnown RBP13.95□□□□□ -0.18
COL4A6-205ENST00000468338 MYO3BQ8WXR4 1341 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 EYA2O00167 538 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 PDE8BO95263 885 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 GNAI3P08754 354 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 MMP14P50281 582 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 TTLL5Q6EMB2 1281 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 JMYQ8N9B5 988 aa13.94□□□□□ -0.18
COL4A6-205ENST00000468338 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-205ENST00000468338 TRPM7Q96QT4 1865 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 TMEM88BA6NKF7 163 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 PLIN1O60240 522 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 TBC1D10BQ4KMP7 808 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-205ENST00000468338 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 TMEM57Q8N5G2 664 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 CLUAP1Q96AJ1 413 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 FAM84BQ96KN1 310 aaPredicted RBP13.93□□□□□ -0.18
COL4A6-205ENST00000468338 COPRSQ9NQ92 184 aa13.93□□□□□ -0.18
COL4A6-205ENST00000468338 CIAO1O76071 339 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 FGFR2P21802 821 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 FKBP1AP62942 108 aaKnown RBP13.92□□□□□ -0.18
COL4A6-205ENST00000468338 GTF2IP78347 998 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 KIF4BQ2VIQ3 1234 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 CDC37L1Q7L3B6 337 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 FBXO33Q7Z6M2 555 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 GPIHBP1Q8IV16 184 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
COL4A6-205ENST00000468338 TDRD7Q8NHU6 1098 aaKnown RBP13.92□□□□□ -0.18
COL4A6-205ENST00000468338 MXD3Q9BW11 206 aa13.92□□□□□ -0.18
COL4A6-205ENST00000468338 FAM205AQ6ZU69 1335 aa13.91□□□□□ -0.18
COL4A6-205ENST00000468338 TRAF5O00463 557 aa13.91□□□□□ -0.18
COL4A6-205ENST00000468338 SASH1O94885 1247 aa13.91□□□□□ -0.18
COL4A6-205ENST00000468338 RLBP1P12271 317 aa13.91□□□□□ -0.18
COL4A6-205ENST00000468338 FMR1Q06787 632 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL4A6-205ENST00000468338 CST9Q5W186 159 aa13.91□□□□□ -0.18
COL4A6-205ENST00000468338 GLIS2Q9BZE0 524 aaPredicted RBP13.91□□□□□ -0.18
COL4A6-205ENST00000468338 MYOZ2Q9NPC6 264 aa13.91□□□□□ -0.18
COL4A6-205ENST00000468338 HIBADHP31937 336 aaKnown RBP13.9□□□□□ -0.18
COL4A6-205ENST00000468338 GYG1P46976 350 aa13.9□□□□□ -0.18
COL4A6-205ENST00000468338 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
COL4A6-205ENST00000468338 CERS5Q8N5B7 392 aa13.9□□□□□ -0.18
COL4A6-205ENST00000468338 ZBED3Q96IU2 234 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-205ENST00000468338 CNTNAP1P78357 1384 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms