RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FAM205AQ6ZU69 1335 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 USP17L3A6NCW0 530 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 USP17L4A6NCW7 530 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 PDE1AP54750 535 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 GTF2IP78347 998 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 TNIP1Q15025 636 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 STRIP1Q5VSL9 837 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 TTLL5Q6EMB2 1281 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 USP17L1Q7RTZ2 530 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 SPATA5Q8NB90 893 aa18.56■□□□□ 0.56
SNIP1-202ENST00000468040 COL1A1P02452 1464 aaPredicted RBP18.55■□□□□ 0.56
SNIP1-202ENST00000468040 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
SNIP1-202ENST00000468040 MCAMP43121 646 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 CXCL9Q07325 125 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
SNIP1-202ENST00000468040 CIAPIN1Q6FI81 312 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 PLEKHM2Q8IWE5 1019 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 WDR66Q8TBY9 1149 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 TBC1D22AQ8WUA7 517 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 FBXW7Q969H0 707 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 OSBPL3Q9H4L5 887 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 HMG20BQ9P0W2 317 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 PSME4Q14997 1843 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 SCN9AQ15858 1988 aa18.55■□□□□ 0.56
SNIP1-202ENST00000468040 RAD17O75943 681 aa18.54■□□□□ 0.56
SNIP1-202ENST00000468040 PDE4AP27815 886 aa18.54■□□□□ 0.56
SNIP1-202ENST00000468040 FKBP1AP62942 108 aaKnown RBP18.54■□□□□ 0.56
SNIP1-202ENST00000468040 SCARF1Q14162 830 aa18.54■□□□□ 0.56
SNIP1-202ENST00000468040 ZGPATQ8N5A5 531 aaKnown RBP18.54■□□□□ 0.56
SNIP1-202ENST00000468040 MYO3BQ8WXR4 1341 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 VIL1P09327 827 aaKnown RBP18.53■□□□□ 0.56
SNIP1-202ENST00000468040 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 PI4K2BQ8TCG2 481 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 HAUS7Q99871 368 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 BOLA2Q9H3K6 86 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 KCNQ5Q9NR82 932 aa18.53■□□□□ 0.56
SNIP1-202ENST00000468040 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 UTRNP46939 3433 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 PSMD14O00487 310 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 MFSD14BQ5SR56 506 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 GPC2Q8N158 579 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 JAG2Q9Y219 1238 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 AKAP11Q9UKA4 1901 aa18.52■□□□□ 0.56
SNIP1-202ENST00000468040 ZAP70P43403 619 aa18.51■□□□□ 0.55
SNIP1-202ENST00000468040 TTF1Q15361 905 aaPredicted RBP18.51■□□□□ 0.55
SNIP1-202ENST00000468040 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
SNIP1-202ENST00000468040 PI16Q6UXB8 463 aa18.51■□□□□ 0.55
SNIP1-202ENST00000468040 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
SNIP1-202ENST00000468040 SNRKQ9NRH2 765 aa18.51■□□□□ 0.55
SNIP1-202ENST00000468040 SUGT1Q9Y2Z0 365 aa18.51■□□□□ 0.55
SNIP1-202ENST00000468040 IGSF3O75054 1194 aa18.5■□□□□ 0.55
SNIP1-202ENST00000468040 RPS12P25398 132 aaKnown RBP18.5■□□□□ 0.55
SNIP1-202ENST00000468040 AGBL3Q8NEM8 1001 aa18.5■□□□□ 0.55
SNIP1-202ENST00000468040 GJA3Q9Y6H8 435 aa18.5■□□□□ 0.55
SNIP1-202ENST00000468040 ZNF646O15015 1829 aaPredicted RBP18.5■□□□□ 0.55
SNIP1-202ENST00000468040 CYP2E1P05181 493 aaPredicted RBP18.49■□□□□ 0.55
SNIP1-202ENST00000468040 SPTY2D1Q68D10 685 aaPredicted RBP18.49■□□□□ 0.55
SNIP1-202ENST00000468040 PAG1Q9NWQ8 432 aa18.49■□□□□ 0.55
SNIP1-202ENST00000468040 ABCF2Q9UG63 623 aa18.49■□□□□ 0.55
SNIP1-202ENST00000468040 GLTPD2A6NH11 291 aa18.48■□□□□ 0.55
SNIP1-202ENST00000468040 GOLIM4O00461 696 aa18.48■□□□□ 0.55
SNIP1-202ENST00000468040 CERS5Q8N5B7 392 aa18.48■□□□□ 0.55
SNIP1-202ENST00000468040 NDUFB9Q9Y6M9 179 aa18.48■□□□□ 0.55
SNIP1-202ENST00000468040 MAST3O60307 1309 aa18.48■□□□□ 0.55
SNIP1-202ENST00000468040 DDNO94850 711 aaPredicted RBP18.47■□□□□ 0.55
SNIP1-202ENST00000468040 LDHBP07195 334 aaKnown RBP18.47■□□□□ 0.55
SNIP1-202ENST00000468040 RGS3P49796 1198 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 MMP14P50281 582 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 DPF2Q92785 391 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 GMLQ99445 158 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 MXD3Q9BW11 206 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 LRP2BPQ9P2M1 347 aa18.47■□□□□ 0.55
SNIP1-202ENST00000468040 ZBTB12Q9Y330 459 aaPredicted RBP18.47■□□□□ 0.55
SNIP1-202ENST00000468040 GMPSP49915 693 aaPredicted RBP18.46■□□□□ 0.55
SNIP1-202ENST00000468040 SKAP1Q86WV1 359 aa18.46■□□□□ 0.55
SNIP1-202ENST00000468040 EVI5LQ96CN4 794 aa18.46■□□□□ 0.55
SNIP1-202ENST00000468040 ANTXR1Q9H6X2 564 aa18.46■□□□□ 0.55
SNIP1-202ENST00000468040 PIH1D3Q9NQM4 214 aaKnown RBP18.46■□□□□ 0.55
SNIP1-202ENST00000468040 USP17L8P0C7I0 530 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 PRDX5P30044 214 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 MAP3K12Q12852 859 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 TMED8Q6PL24 325 aaPredicted RBP18.45■□□□□ 0.54
SNIP1-202ENST00000468040 DZIP1Q86YF9 867 aaKnown RBP18.45■□□□□ 0.54
SNIP1-202ENST00000468040 KIAA0825Q8IV33 1275 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
SNIP1-202ENST00000468040 L3MBTL3Q96JM7 780 aaPredicted RBP18.45■□□□□ 0.54
SNIP1-202ENST00000468040 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNIP1-202ENST00000468040 RAI14Q9P0K7 980 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 HDAC9Q9UKV0 1011 aa18.45■□□□□ 0.54
SNIP1-202ENST00000468040 TTF2Q9UNY4 1162 aaKnown RBP18.45■□□□□ 0.54
SNIP1-202ENST00000468040 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
SNIP1-202ENST00000468040 IDH1O75874 414 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms