RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
RNF13-208ENST00000467996 GNL3LQ9NVN8 582 aaKnown RBP14.43□□□□□ -0.1
RNF13-208ENST00000467996 HMG20BQ9P0W2 317 aa14.43□□□□□ -0.1
RNF13-208ENST00000467996 IQSEC3Q9UPP2 1182 aaPredicted RBP14.43□□□□□ -0.1
RNF13-208ENST00000467996 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 SEMA3EO15041 775 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 ZBTB22O15209 634 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 IL1R1P14778 569 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 SDSP20132 328 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 ZAP70P43403 619 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 KIAA2012Q0VF49 1180 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 SPATA5Q8NB90 893 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 TDRD7Q8NHU6 1098 aaKnown RBP14.42□□□□□ -0.1
RNF13-208ENST00000467996 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
RNF13-208ENST00000467996 COA1Q9GZY4 146 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 CD209Q9NNX6 404 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 SNRKQ9NRH2 765 aa14.42□□□□□ -0.1
RNF13-208ENST00000467996 ZNF277Q9NRM2 450 aaPredicted RBP14.42□□□□□ -0.1
RNF13-208ENST00000467996 PDS5AQ29RF7 1337 aaKnown RBP14.41□□□□□ -0.1
RNF13-208ENST00000467996 TRIM6-TRIM34B2RNG4 842 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 PPIP5K2O43314 1243 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
RNF13-208ENST00000467996 RASSF7Q02833 373 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 CNTROBQ8N137 903 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 DENND2AQ9ULE3 1009 aa14.41□□□□□ -0.1
RNF13-208ENST00000467996 GOLIM4O00461 696 aa14.4□□□□□ -0.1
RNF13-208ENST00000467996 FRAT2O75474 233 aaPredicted RBP14.4□□□□□ -0.1
RNF13-208ENST00000467996 IARSP41252 1262 aaKnown RBP14.4□□□□□ -0.1
RNF13-208ENST00000467996 DOK7Q18PE1 504 aa14.4□□□□□ -0.1
RNF13-208ENST00000467996 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
RNF13-208ENST00000467996 EVI5LQ96CN4 794 aa14.4□□□□□ -0.1
RNF13-208ENST00000467996 VPS33BQ9H267 617 aa14.4□□□□□ -0.1
RNF13-208ENST00000467996 ANTXR1Q9H6X2 564 aa14.4□□□□□ -0.1
RNF13-208ENST00000467996 DBNDD1Q9H9R9 158 aa14.4□□□□□ -0.1
RNF13-208ENST00000467996 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
RNF13-208ENST00000467996 G3V3G9 751 aa14.39□□□□□ -0.11
RNF13-208ENST00000467996 ECE2O60344 883 aa14.39□□□□□ -0.11
RNF13-208ENST00000467996 CYP2E1P05181 493 aaPredicted RBP14.39□□□□□ -0.11
RNF13-208ENST00000467996 CHAF1AQ13111 956 aaPredicted RBP14.39□□□□□ -0.11
RNF13-208ENST00000467996 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
RNF13-208ENST00000467996 TTF1Q15361 905 aaPredicted RBP14.38□□□□□ -0.11
RNF13-208ENST00000467996 LARGE2Q8N3Y3 721 aa14.38□□□□□ -0.11
RNF13-208ENST00000467996 FSD1Q9BTV5 496 aa14.38□□□□□ -0.11
RNF13-208ENST00000467996 PIH1D3Q9NQM4 214 aaKnown RBP14.38□□□□□ -0.11
RNF13-208ENST00000467996 JAG2Q9Y219 1238 aa14.38□□□□□ -0.11
RNF13-208ENST00000467996 PRELPP51888 382 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 TBC1D9Q6ZT07 1266 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 ARHGAP27Q6ZUM4 889 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 PODNQ7Z5L7 613 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 KBTBD3Q8NAB2 608 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 FAM205AQ6ZU69 1335 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 SALL1Q9NSC2 1324 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
RNF13-208ENST00000467996 YDJCA8MPS7 323 aa14.36□□□□□ -0.11
RNF13-208ENST00000467996 CDC45O75419 566 aa14.36□□□□□ -0.11
RNF13-208ENST00000467996 GTF2IP78347 998 aa14.36□□□□□ -0.11
RNF13-208ENST00000467996 NIM1KQ8IY84 436 aa14.36□□□□□ -0.11
RNF13-208ENST00000467996 WDR66Q8TBY9 1149 aa14.36□□□□□ -0.11
RNF13-208ENST00000467996 MYH2Q9UKX2 1941 aa14.36□□□□□ -0.11
RNF13-208ENST00000467996 GOLGB1Q14789 3259 aaKnown RBP14.36□□□□□ -0.11
RNF13-208ENST00000467996 C8orf34Q49A92 452 aa14.35□□□□□ -0.11
RNF13-208ENST00000467996 FBXW7Q969H0 707 aa14.35□□□□□ -0.11
RNF13-208ENST00000467996 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
RNF13-208ENST00000467996 IDH1O75874 414 aaKnown RBP14.34□□□□□ -0.11
RNF13-208ENST00000467996 GPR162Q16538 588 aa14.34□□□□□ -0.11
RNF13-208ENST00000467996 ZGPATQ8N5A5 531 aaKnown RBP14.34□□□□□ -0.11
RNF13-208ENST00000467996 TBC1D22AQ8WUA7 517 aa14.34□□□□□ -0.11
RNF13-208ENST00000467996 KCNQ5Q9NR82 932 aa14.34□□□□□ -0.11
RNF13-208ENST00000467996 ZNRF3Q9ULT6 936 aa14.34□□□□□ -0.11
RNF13-208ENST00000467996 USP17L3A6NCW0 530 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 USP17L4A6NCW7 530 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 CHGBP05060 677 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 CHMLP26374 656 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 PRDX5P30044 214 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 MFSD14BQ5SR56 506 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 STRIP1Q5VSL9 837 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 USP17L1Q7RTZ2 530 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 JDP2Q8WYK2 163 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
RNF13-208ENST00000467996 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
RNF13-208ENST00000467996 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 HIP1O00291 1037 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
RNF13-208ENST00000467996 LMNB1P20700 586 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 ADD2P35612 726 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 MAP3K12Q12852 859 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 GRIK5Q16478 980 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
RNF13-208ENST00000467996 DACT2Q5SW24 774 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 ZSCAN25Q6NSZ9 544 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 CASC1Q6TDU7 716 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 ERICH6Q7L0X2 663 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 TICAM2Q86XR7 235 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 CERS5Q8N5B7 392 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 MXD3Q9BW11 206 aa14.32□□□□□ -0.12
RNF13-208ENST00000467996 RAI14Q9P0K7 980 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms