RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DENND2AQ9ULE3 1009 aa15.71■□□□□ 0.11
COL4A1-202ENST00000467182 MAST2Q6P0Q8 1798 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 TCRBV5S4A2TA0A5A2 114 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 ADD2P35612 726 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 ZNF589Q86UQ0 364 aaPredicted RBP15.7■□□□□ 0.1
COL4A1-202ENST00000467182 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
COL4A1-202ENST00000467182 KIF2CQ99661 725 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 RTFDC1Q9BY42 306 aaPredicted RBP15.7■□□□□ 0.1
COL4A1-202ENST00000467182 HELLSQ9NRZ9 838 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 WWC3Q9ULE0 1092 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 ZNF646O15015 1829 aaPredicted RBP15.7■□□□□ 0.1
COL4A1-202ENST00000467182 CHD4Q14839 1912 aa15.7■□□□□ 0.1
COL4A1-202ENST00000467182 ZFYP08048 801 aaPredicted RBP15.69■□□□□ 0.1
COL4A1-202ENST00000467182 IL1R1P14778 569 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 PTH1RQ03431 593 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 DPP8Q6V1X1 898 aaPredicted RBP15.69■□□□□ 0.1
COL4A1-202ENST00000467182 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 TTLL6Q8N841 843 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 ANO2Q9NQ90 1003 aa15.69■□□□□ 0.1
COL4A1-202ENST00000467182 MAST3O60307 1309 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 C6orf229H3BNL8 230 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 M0R2C6 588 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 UBE3CQ15386 1083 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 MCMDC2Q4G0Z9 681 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 CCDC129Q6ZRS4 1044 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 SALL1Q9NSC2 1324 aa15.68■□□□□ 0.1
COL4A1-202ENST00000467182 PDE6AP16499 860 aa15.67■□□□□ 0.1
COL4A1-202ENST00000467182 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
COL4A1-202ENST00000467182 ZSCAN25Q6NSZ9 544 aa15.67■□□□□ 0.1
COL4A1-202ENST00000467182 APPBP2Q92624 585 aa15.67■□□□□ 0.1
COL4A1-202ENST00000467182 IL17RAQ96F46 866 aa15.67■□□□□ 0.1
COL4A1-202ENST00000467182 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
COL4A1-202ENST00000467182 CCDC171Q6TFL3 1326 aa15.67■□□□□ 0.1
COL4A1-202ENST00000467182 C21orf2O43822 256 aa15.66■□□□□ 0.1
COL4A1-202ENST00000467182 IDH1O75874 414 aaKnown RBP15.66■□□□□ 0.1
COL4A1-202ENST00000467182 LRRFIP1Q32MZ4 808 aaKnown RBP15.66■□□□□ 0.1
COL4A1-202ENST00000467182 SLC9C2Q5TAH2 1124 aa15.66■□□□□ 0.1
COL4A1-202ENST00000467182 ZNF384Q8TF68 577 aa15.66■□□□□ 0.1
COL4A1-202ENST00000467182 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL4A1-202ENST00000467182 PUS7LQ9H0K6 701 aaKnown RBP15.66■□□□□ 0.1
COL4A1-202ENST00000467182 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
COL4A1-202ENST00000467182 CCDC88AQ3V6T2 1871 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 RIMBP2O15034 1052 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 HSPA4P34932 840 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 MAP3K12Q12852 859 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 WASHC4Q2M389 1173 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 MAP4K1Q92918 833 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 COA1Q9GZY4 146 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
COL4A1-202ENST00000467182 PIM2Q9P1W9 311 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 PALD1Q9ULE6 856 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 FER1L6Q2WGJ9 1857 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 FAM205AQ6ZU69 1335 aa15.65■□□□□ 0.1
COL4A1-202ENST00000467182 FOXP2O15409 715 aa15.64■□□□□ 0.09
COL4A1-202ENST00000467182 CHAF1AQ13111 956 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-202ENST00000467182 GRIPAP1Q4V328 841 aa15.64■□□□□ 0.09
COL4A1-202ENST00000467182 MAGEB6Q8N7X4 407 aa15.64■□□□□ 0.09
COL4A1-202ENST00000467182 KCNB2Q92953 911 aa15.64■□□□□ 0.09
COL4A1-202ENST00000467182 EYA3Q99504 573 aa15.64■□□□□ 0.09
COL4A1-202ENST00000467182 ZC3H12CQ9C0D7 883 aaKnown RBP15.64■□□□□ 0.09
COL4A1-202ENST00000467182 JAG2Q9Y219 1238 aa15.64■□□□□ 0.09
COL4A1-202ENST00000467182 FRAT2O75474 233 aaPredicted RBP15.63■□□□□ 0.09
COL4A1-202ENST00000467182 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 GRIK5Q16478 980 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 CCDC93Q567U6 631 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 VPS53Q5VIR6 699 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 KIAA1211Q6ZU35 1233 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 ADGRA1Q86SQ6 560 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 WDR66Q8TBY9 1149 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 NSUN4Q96CB9 384 aaKnown RBP15.63■□□□□ 0.09
COL4A1-202ENST00000467182 SPON1Q9HCB6 807 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 LRP2BPQ9P2M1 347 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 ABCF2Q9UG63 623 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 SCN9AQ15858 1988 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 PSME4Q14997 1843 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 ARFGEF1Q9Y6D6 1849 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 COL4A5P29400 1685 aa15.63■□□□□ 0.09
COL4A1-202ENST00000467182 PRDX5P30044 214 aa15.62■□□□□ 0.09
COL4A1-202ENST00000467182 ANP32AP39687 249 aaKnown RBP15.62■□□□□ 0.09
COL4A1-202ENST00000467182 DOK7Q18PE1 504 aa15.62■□□□□ 0.09
COL4A1-202ENST00000467182 PSMD1Q99460 953 aa15.62■□□□□ 0.09
COL4A1-202ENST00000467182 RBM8AQ9Y5S9 174 aaKnown RBP15.62■□□□□ 0.09
COL4A1-202ENST00000467182 GPAA1O43292 621 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 IGSF3O75054 1194 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 HSPD1P10809 573 aaKnown RBP15.61■□□□□ 0.09
COL4A1-202ENST00000467182 MECOMQ03112 1051 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 DALRD3Q5D0E6 543 aaKnown RBP15.61■□□□□ 0.09
COL4A1-202ENST00000467182 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 SUPT20HQ8NEM7 779 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 NLGN2Q8NFZ4 835 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 DSCC1Q9BVC3 393 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 RAI14Q9P0K7 980 aa15.61■□□□□ 0.09
COL4A1-202ENST00000467182 CYP7A1P22680 504 aa15.6■□□□□ 0.09
COL4A1-202ENST00000467182 ANAPC15P60006 121 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms