RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 R3HDMLQ9H3Y0 253 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 IL16Q14005 1332 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 PRKG1Q13976 671 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 IFNL1Q8IU54 200 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 TSR2Q969E8 191 aaKnown RBP11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 SLC10A4Q96EP9 437 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 WNK4Q96J92 1243 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 DEFB129Q9H1M3 183 aa11.44□□□□□ -0.58
PTPDC1-203ENST00000467049 ANKRD18BA2A2Z9 1011 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 FLIIQ13045 1269 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 CERS5Q8N5B7 392 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 LINS1Q8NG48 757 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 GCC1Q96CN9 775 aa11.43□□□□□ -0.58
PTPDC1-203ENST00000467049 PPP1R12BO60237 982 aaPredicted RBP11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 IL1R1P14778 569 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 SUPT20HL1Q3ZLR7 823 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 MYO1BO43795 1136 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 OTOP1Q7RTM1 612 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 ERO1AQ96HE7 468 aa11.42□□□□□ -0.58
PTPDC1-203ENST00000467049 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
PTPDC1-203ENST00000467049 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
PTPDC1-203ENST00000467049 WWC1Q8IX03 1113 aa11.41□□□□□ -0.58
PTPDC1-203ENST00000467049 TRIM17Q9Y577 477 aa11.41□□□□□ -0.58
PTPDC1-203ENST00000467049 IGF2BP3O00425 579 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 IREB2P48200 963 aaKnown RBP11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 FKBP5Q13451 457 aaPredicted RBP11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 OTUD7BQ6GQQ9 843 aa11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 CLMNQ96JQ2 1002 aa11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 FZD1Q9UP38 647 aa11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 FAM205AQ6ZU69 1335 aa11.4□□□□□ -0.58
PTPDC1-203ENST00000467049 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.59
PTPDC1-203ENST00000467049 FOXO4P98177 505 aa11.4□□□□□ -0.59
PTPDC1-203ENST00000467049 CLRN2A0PK11 232 aa11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 TAF5LO75529 589 aa11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 USP2O75604 605 aaPredicted RBP11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 ARMC5Q96C12 935 aa11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 PTPN22Q9Y2R2 807 aa11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 PCDHAC2Q9Y5I4 1007 aa11.39□□□□□ -0.59
PTPDC1-203ENST00000467049 F8W031 263 aaPredicted RBP11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 SNAP23O00161 211 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 GJA5P36382 358 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 NBPF12Q5TAG4 269 aaPredicted RBP11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 VEZTQ9HBM0 779 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 CRHR2Q13324 411 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 RASA3Q14644 834 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 CD99L2Q8TCZ2 262 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
PTPDC1-203ENST00000467049 KIAA0100Q14667 2235 aaKnown RBP11.37□□□□□ -0.59
PTPDC1-203ENST00000467049 AOX1Q06278 1338 aa11.37□□□□□ -0.59
PTPDC1-203ENST00000467049 POTEFA5A3E0 1075 aa11.37□□□□□ -0.59
PTPDC1-203ENST00000467049 VAMP4O75379 141 aa11.37□□□□□ -0.59
PTPDC1-203ENST00000467049 BEND3Q5T5X7 828 aa11.37□□□□□ -0.59
PTPDC1-203ENST00000467049 EFCC1Q9HA90 598 aa11.37□□□□□ -0.59
PTPDC1-203ENST00000467049 SP3Q02447 781 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 CCDC57Q2TAC2 916 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 TDRD7Q8NHU6 1098 aaKnown RBP11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 SERPINA10Q9UK55 444 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 UBE4AQ14139 1066 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 TAF7LQ5H9L4 462 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 WDR63Q8IWG1 891 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 PTPN18Q99952 460 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
PTPDC1-203ENST00000467049 MYH13Q9UKX3 1938 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 GRM8O00222 908 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 ARHGEF6Q15052 776 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 OPTNQ96CV9 577 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 TEPSINQ96N21 525 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 ELP3Q9H9T3 547 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
PTPDC1-203ENST00000467049 F6X3S4 739 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 ALDH1L1O75891 902 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 TNNI2P48788 182 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 HABP4Q5JVS0 413 aaKnown RBP11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 ZNF594Q96JF6 807 aaPredicted RBP11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 PLIN1O60240 522 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 MAP3K9P80192 1104 aa11.34□□□□□ -0.59
PTPDC1-203ENST00000467049 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms