RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ATP5JP18859 108 aa18.58■□□□□ 0.56
NPHP4-205ENST00000466897 TTC39AQ5SRH9 613 aa18.58■□□□□ 0.56
NPHP4-205ENST00000466897 OSBPL3Q9H4L5 887 aa18.58■□□□□ 0.56
NPHP4-205ENST00000466897 DENND2AQ9ULE3 1009 aa18.58■□□□□ 0.56
NPHP4-205ENST00000466897 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.56
NPHP4-205ENST00000466897 MYO5AQ9Y4I1 1855 aaKnown RBP18.57■□□□□ 0.56
NPHP4-205ENST00000466897 FKBP1AP62942 108 aaKnown RBP18.57■□□□□ 0.56
NPHP4-205ENST00000466897 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
NPHP4-205ENST00000466897 SALL1Q9NSC2 1324 aa18.56■□□□□ 0.56
NPHP4-205ENST00000466897 RASGRF1Q13972 1273 aa18.56■□□□□ 0.56
NPHP4-205ENST00000466897 STRIP1Q5VSL9 837 aa18.56■□□□□ 0.56
NPHP4-205ENST00000466897 USP17L3A6NCW0 530 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 USP17L4A6NCW7 530 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 ERC2O15083 957 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 IGSF3O75054 1194 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 MCAMP43121 646 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 PDE1AP54750 535 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 EIF6P56537 245 aaKnown RBP18.55■□□□□ 0.56
NPHP4-205ENST00000466897 USP17L1Q7RTZ2 530 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 PLEKHM2Q8IWE5 1019 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 OTUD7AQ8TE49 926 aaPredicted RBP18.55■□□□□ 0.56
NPHP4-205ENST00000466897 TBC1D22AQ8WUA7 517 aa18.55■□□□□ 0.56
NPHP4-205ENST00000466897 MYO3BQ8WXR4 1341 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
NPHP4-205ENST00000466897 GLRX3O76003 335 aaKnown RBP18.54■□□□□ 0.56
NPHP4-205ENST00000466897 VIL1P09327 827 aaKnown RBP18.54■□□□□ 0.56
NPHP4-205ENST00000466897 PDE4AP27815 886 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 CXCL9Q07325 125 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 TNIP1Q15025 636 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 SPATA5Q8NB90 893 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 WDR66Q8TBY9 1149 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 PI4K2BQ8TCG2 481 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 HMG20BQ9P0W2 317 aa18.54■□□□□ 0.56
NPHP4-205ENST00000466897 SCN4AP35499 1836 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 SCARF1Q14162 830 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 ZGPATQ8N5A5 531 aaKnown RBP18.53■□□□□ 0.56
NPHP4-205ENST00000466897 WDR90Q96KV7 1748 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 HAUS7Q99871 368 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 SUGT1Q9Y2Z0 365 aa18.53■□□□□ 0.56
NPHP4-205ENST00000466897 GTF2IP78347 998 aa18.52■□□□□ 0.56
NPHP4-205ENST00000466897 GPC2Q8N158 579 aa18.52■□□□□ 0.56
NPHP4-205ENST00000466897 BCL11AQ9H165 835 aa18.52■□□□□ 0.56
NPHP4-205ENST00000466897 IQSEC3Q9UPP2 1182 aaPredicted RBP18.52■□□□□ 0.56
NPHP4-205ENST00000466897 ZNF541Q9H0D2 1346 aa18.51■□□□□ 0.55
NPHP4-205ENST00000466897 PSMD14O00487 310 aa18.51■□□□□ 0.55
NPHP4-205ENST00000466897 RAD17O75943 681 aa18.51■□□□□ 0.55
NPHP4-205ENST00000466897 RPS12P25398 132 aaKnown RBP18.51■□□□□ 0.55
NPHP4-205ENST00000466897 MMP14P50281 582 aa18.51■□□□□ 0.55
NPHP4-205ENST00000466897 AGBL3Q8NEM8 1001 aa18.51■□□□□ 0.55
NPHP4-205ENST00000466897 KCNQ5Q9NR82 932 aa18.51■□□□□ 0.55
NPHP4-205ENST00000466897 TTF1Q15361 905 aaPredicted RBP18.5■□□□□ 0.55
NPHP4-205ENST00000466897 RSBN1LQ6PCB5 846 aaPredicted RBP18.5■□□□□ 0.55
NPHP4-205ENST00000466897 ECM29Q5VYK3 1845 aa18.5■□□□□ 0.55
NPHP4-205ENST00000466897 MYH2Q9UKX2 1941 aa18.5■□□□□ 0.55
NPHP4-205ENST00000466897 ZAP70P43403 619 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
NPHP4-205ENST00000466897 MFSD14BQ5SR56 506 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 TSHZ3Q63HK5 1081 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 DPY19L2Q6NUT2 758 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 TMED8Q6PL24 325 aaPredicted RBP18.49■□□□□ 0.55
NPHP4-205ENST00000466897 PI16Q6UXB8 463 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 ZNF784Q8NCA9 323 aaPredicted RBP18.49■□□□□ 0.55
NPHP4-205ENST00000466897 GMLQ99445 158 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 BOLA2Q9H3K6 86 aa18.49■□□□□ 0.55
NPHP4-205ENST00000466897 GLTPD2A6NH11 291 aa18.48■□□□□ 0.55
NPHP4-205ENST00000466897 CYP2E1P05181 493 aaPredicted RBP18.48■□□□□ 0.55
NPHP4-205ENST00000466897 SPTY2D1Q68D10 685 aaPredicted RBP18.48■□□□□ 0.55
NPHP4-205ENST00000466897 TICAM2Q86XR7 235 aa18.48■□□□□ 0.55
NPHP4-205ENST00000466897 CERS5Q8N5B7 392 aa18.48■□□□□ 0.55
NPHP4-205ENST00000466897 DPF2Q92785 391 aa18.48■□□□□ 0.55
NPHP4-205ENST00000466897 L3MBTL3Q96JM7 780 aaPredicted RBP18.48■□□□□ 0.55
NPHP4-205ENST00000466897 PAG1Q9NWQ8 432 aa18.48■□□□□ 0.55
NPHP4-205ENST00000466897 SNRKQ9NRH2 765 aa18.47■□□□□ 0.55
NPHP4-205ENST00000466897 MAST3O60307 1309 aa18.47■□□□□ 0.55
NPHP4-205ENST00000466897 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
NPHP4-205ENST00000466897 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
NPHP4-205ENST00000466897 DNAJC2Q99543 621 aaKnown RBP18.46■□□□□ 0.55
NPHP4-205ENST00000466897 RFX7Q2KHR2 1363 aa18.45■□□□□ 0.54
NPHP4-205ENST00000466897 GOLIM4O00461 696 aa18.45■□□□□ 0.54
NPHP4-205ENST00000466897 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
NPHP4-205ENST00000466897 MRIQ9BWK5 157 aa18.45■□□□□ 0.54
NPHP4-205ENST00000466897 JAG2Q9Y219 1238 aa18.45■□□□□ 0.54
NPHP4-205ENST00000466897 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
NPHP4-205ENST00000466897 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-205ENST00000466897 PRDX5P30044 214 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 GMPSP49915 693 aaPredicted RBP18.44■□□□□ 0.54
NPHP4-205ENST00000466897 HDLBPQ00341 1268 aaKnown RBP18.44■□□□□ 0.54
NPHP4-205ENST00000466897 ERICH6Q7L0X2 663 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 KBTBD3Q8NAB2 608 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 MXD3Q9BW11 206 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 ANTXR1Q9H6X2 564 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 PIH1D3Q9NQM4 214 aaKnown RBP18.44■□□□□ 0.54
NPHP4-205ENST00000466897 ABCF2Q9UG63 623 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 GJA3Q9Y6H8 435 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 NDUFB9Q9Y6M9 179 aa18.44■□□□□ 0.54
NPHP4-205ENST00000466897 SCNN1DP51172 638 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms