RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 ZCCHC17Q9NP64 241 aaKnown RBP10.54□□□□□ -0.72
APP-214ENST00000466453 DCHS1Q96JQ0 3298 aa10.54□□□□□ -0.72
APP-214ENST00000466453 PTPRZ1P23471 2315 aaPredicted RBP10.53□□□□□ -0.72
APP-214ENST00000466453 MGAMO43451 1857 aa10.53□□□□□ -0.72
APP-214ENST00000466453 CHD6Q8TD26 2715 aa10.53□□□□□ -0.72
APP-214ENST00000466453 KMT2BQ9UMN6 2715 aaPredicted RBP10.53□□□□□ -0.72
APP-214ENST00000466453 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
APP-214ENST00000466453 SNRPA1P09661 255 aaKnown RBP10.53□□□□□ -0.72
APP-214ENST00000466453 IL13P35225 146 aa10.53□□□□□ -0.72
APP-214ENST00000466453 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
APP-214ENST00000466453 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
APP-214ENST00000466453 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
APP-214ENST00000466453 NBPF3Q9H094 633 aa10.53□□□□□ -0.72
APP-214ENST00000466453 CHD7Q9P2D1 2997 aa10.53□□□□□ -0.72
APP-214ENST00000466453 COL3A1P02461 1466 aaPredicted RBP10.53□□□□□ -0.72
APP-214ENST00000466453 COL4A1P02462 1669 aa10.53□□□□□ -0.72
APP-214ENST00000466453 ANKRD11Q6UB99 2663 aaPredicted RBP10.52□□□□□ -0.72
APP-214ENST00000466453 SASH1O94885 1247 aa10.52□□□□□ -0.73
APP-214ENST00000466453 INHAP05111 366 aa10.52□□□□□ -0.73
APP-214ENST00000466453 GPSM2P81274 684 aa10.52□□□□□ -0.73
APP-214ENST00000466453 PRKCZQ05513 592 aa10.52□□□□□ -0.73
APP-214ENST00000466453 PARP10Q53GL7 1025 aa10.52□□□□□ -0.73
APP-214ENST00000466453 ANKRD13AQ8IZ07 590 aa10.52□□□□□ -0.73
APP-214ENST00000466453 IL27Q8NEV9 243 aa10.52□□□□□ -0.73
APP-214ENST00000466453 TBC1D16Q8TBP0 767 aa10.52□□□□□ -0.73
APP-214ENST00000466453 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.73
APP-214ENST00000466453 DEFB129Q9H1M3 183 aa10.52□□□□□ -0.73
APP-214ENST00000466453 EPHX3Q9H6B9 360 aa10.52□□□□□ -0.73
APP-214ENST00000466453 GPR37L1O60883 481 aa10.51□□□□□ -0.73
APP-214ENST00000466453 FMNL1O95466 1100 aaPredicted RBP10.51□□□□□ -0.73
APP-214ENST00000466453 IREB2P48200 963 aaKnown RBP10.51□□□□□ -0.73
APP-214ENST00000466453 GTF2A2P52657 109 aa10.51□□□□□ -0.73
APP-214ENST00000466453 SMAD3P84022 425 aaKnown RBP10.51□□□□□ -0.73
APP-214ENST00000466453 C17orf99Q6UX52 265 aa10.51□□□□□ -0.73
APP-214ENST00000466453 NECAB3Q96P71 396 aaPredicted RBP10.51□□□□□ -0.73
APP-214ENST00000466453 C11orf16Q9NQ32 467 aa10.51□□□□□ -0.73
APP-214ENST00000466453 ZFHX2Q9C0A1 2572 aaPredicted RBP10.5□□□□□ -0.73
APP-214ENST00000466453 ECM29Q5VYK3 1845 aa10.5□□□□□ -0.73
APP-214ENST00000466453 BTBD11A6QL63 1104 aa10.5□□□□□ -0.73
APP-214ENST00000466453 NHLH1Q02575 133 aa10.5□□□□□ -0.73
APP-214ENST00000466453 KIF6Q6ZMV9 814 aa10.5□□□□□ -0.73
APP-214ENST00000466453 OGFOD1Q8N543 542 aa10.5□□□□□ -0.73
APP-214ENST00000466453 UTP14AQ9BVJ6 771 aaKnown RBP10.5□□□□□ -0.73
APP-214ENST00000466453 C11orf49Q9H6J7 331 aa10.5□□□□□ -0.73
APP-214ENST00000466453 PPP2R3BQ9Y5P8 575 aa10.5□□□□□ -0.73
APP-214ENST00000466453 CEMIPQ8WUJ3 1361 aa10.5□□□□□ -0.73
APP-214ENST00000466453 CFAP47Q6ZTR5 3102 aa10.49□□□□□ -0.73
APP-214ENST00000466453 ZNF318Q5VUA4 2279 aa10.49□□□□□ -0.73
APP-214ENST00000466453 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
APP-214ENST00000466453 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
APP-214ENST00000466453 G3V3G9 751 aa10.49□□□□□ -0.73
APP-214ENST00000466453 ADCY3O60266 1144 aa10.49□□□□□ -0.73
APP-214ENST00000466453 USP2O75604 605 aaPredicted RBP10.49□□□□□ -0.73
APP-214ENST00000466453 DCAF8Q5TAQ9 597 aa10.49□□□□□ -0.73
APP-214ENST00000466453 TTLL7Q6ZT98 887 aa10.49□□□□□ -0.73
APP-214ENST00000466453 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
APP-214ENST00000466453 ELP3Q9H9T3 547 aa10.49□□□□□ -0.73
APP-214ENST00000466453 DOCK3Q8IZD9 2030 aa10.49□□□□□ -0.73
APP-214ENST00000466453 RIF1Q5UIP0 2472 aaKnown RBP10.49□□□□□ -0.73
APP-214ENST00000466453 HCLS1P14317 486 aaPredicted RBP10.48□□□□□ -0.73
APP-214ENST00000466453 MMP14P50281 582 aa10.48□□□□□ -0.73
APP-214ENST00000466453 SUPT20HL1Q3ZLR7 823 aa10.48□□□□□ -0.73
APP-214ENST00000466453 GIGYF2Q6Y7W6 1299 aaKnown RBP10.48□□□□□ -0.73
APP-214ENST00000466453 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
APP-214ENST00000466453 ZBED3Q96IU2 234 aaPredicted RBP10.48□□□□□ -0.73
APP-214ENST00000466453 ZBTB3Q9H5J0 574 aa10.48□□□□□ -0.73
APP-214ENST00000466453 LTBP2Q14767 1821 aa10.48□□□□□ -0.73
APP-214ENST00000466453 CACNA1HO95180 2353 aa10.48□□□□□ -0.73
APP-214ENST00000466453 PFASO15067 1338 aa10.48□□□□□ -0.73
APP-214ENST00000466453 TRANK1O15050 2925 aa10.47□□□□□ -0.73
APP-214ENST00000466453 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
APP-214ENST00000466453 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
APP-214ENST00000466453 HMOX1P09601 288 aa10.47□□□□□ -0.73
APP-214ENST00000466453 ELNP15502 786 aa10.47□□□□□ -0.73
APP-214ENST00000466453 GRIN2CQ14957 1233 aa10.47□□□□□ -0.73
APP-214ENST00000466453 CDCA8Q53HL2 280 aa10.47□□□□□ -0.73
APP-214ENST00000466453 LBHD1Q9BQE6 289 aaPredicted RBP10.47□□□□□ -0.73
APP-214ENST00000466453 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.47□□□□□ -0.73
APP-214ENST00000466453 PODXL2Q9NZ53 605 aa10.47□□□□□ -0.73
APP-214ENST00000466453 CPA4Q9UI42 421 aa10.47□□□□□ -0.73
APP-214ENST00000466453 GABRQQ9UN88 632 aa10.47□□□□□ -0.73
APP-214ENST00000466453 AKNAD1Q5T1N1 836 aa10.46□□□□□ -0.73
APP-214ENST00000466453 PODNQ7Z5L7 613 aa10.46□□□□□ -0.73
APP-214ENST00000466453 NGEFQ8N5V2 710 aa10.46□□□□□ -0.73
APP-214ENST00000466453 CELF1Q92879 486 aaKnown RBP10.46□□□□□ -0.73
APP-214ENST00000466453 MYO3BQ8WXR4 1341 aa10.46□□□□□ -0.73
APP-214ENST00000466453 MAST2Q6P0Q8 1798 aa10.46□□□□□ -0.74
APP-214ENST00000466453 ZNF804BA4D1E1 1349 aa10.45□□□□□ -0.74
APP-214ENST00000466453 UFL1O94874 794 aa10.45□□□□□ -0.74
APP-214ENST00000466453 BMP1P13497 986 aa10.45□□□□□ -0.74
APP-214ENST00000466453 FCGRTP55899 365 aa10.45□□□□□ -0.74
APP-214ENST00000466453 IRF5Q13568 498 aa10.45□□□□□ -0.74
APP-214ENST00000466453 DACT2Q5SW24 774 aa10.45□□□□□ -0.74
APP-214ENST00000466453 NBPF12Q5TAG4 269 aaPredicted RBP10.45□□□□□ -0.74
APP-214ENST00000466453 MTMR14Q8NCE2 650 aa10.45□□□□□ -0.74
APP-214ENST00000466453 SIN3AQ96ST3 1273 aa10.45□□□□□ -0.74
APP-214ENST00000466453 TRIOO75962 3097 aa10.45□□□□□ -0.74
APP-214ENST00000466453 ACACBO00763 2458 aa10.45□□□□□ -0.74
APP-214ENST00000466453 MYO15AQ9UKN7 3530 aa10.44□□□□□ -0.74
APP-214ENST00000466453 FAM86C2PA6NEL3 165 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms