RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
CHPF2-202ENST00000465601 PHKA1P46020 1223 aa15.28■□□□□ 0.04
CHPF2-202ENST00000465601 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
CHPF2-202ENST00000465601 TBC1D10BQ4KMP7 808 aaPredicted RBP15.28■□□□□ 0.04
CHPF2-202ENST00000465601 USP50Q70EL3 339 aaPredicted RBP15.28■□□□□ 0.04
CHPF2-202ENST00000465601 CERS5Q8N5B7 392 aa15.28■□□□□ 0.04
CHPF2-202ENST00000465601 TRPM4Q8TD43 1214 aa15.28■□□□□ 0.04
CHPF2-202ENST00000465601 PCDHB15Q9Y5E8 787 aa15.28■□□□□ 0.04
CHPF2-202ENST00000465601 APBB1O00213 710 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 EGFRP00533 1210 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 HIRAP54198 1017 aaPredicted RBP15.27■□□□□ 0.04
CHPF2-202ENST00000465601 HSP90AB4PQ58FF6 505 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 TNNI3KQ59H18 835 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 KIAA0825Q8IV33 1275 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 SMC1BQ8NDV3 1235 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 FPGT-TNNI3KV9GXZ4 949 aa15.27■□□□□ 0.04
CHPF2-202ENST00000465601 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 F8W031 263 aaPredicted RBP15.26■□□□□ 0.03
CHPF2-202ENST00000465601 ZNF280AP59817 542 aaPredicted RBP15.26■□□□□ 0.03
CHPF2-202ENST00000465601 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 CCDC102BQ68D86 513 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 ERC1Q8IUD2 1116 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 GPR108Q9NPR9 543 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 GNL3LQ9NVN8 582 aaKnown RBP15.26■□□□□ 0.03
CHPF2-202ENST00000465601 ARAP2Q8WZ64 1704 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 ZNF609O15014 1411 aa15.26■□□□□ 0.03
CHPF2-202ENST00000465601 FKBP1AP62942 108 aaKnown RBP15.25■□□□□ 0.03
CHPF2-202ENST00000465601 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
CHPF2-202ENST00000465601 FSTL1Q12841 308 aa15.25■□□□□ 0.03
CHPF2-202ENST00000465601 MFSD14BQ5SR56 506 aa15.25■□□□□ 0.03
CHPF2-202ENST00000465601 MAP1SQ66K74 1059 aaPredicted RBP15.25■□□□□ 0.03
CHPF2-202ENST00000465601 OGFOD1Q8N543 542 aa15.25■□□□□ 0.03
CHPF2-202ENST00000465601 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
CHPF2-202ENST00000465601 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
CHPF2-202ENST00000465601 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
CHPF2-202ENST00000465601 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
CHPF2-202ENST00000465601 KIF4BQ2VIQ3 1234 aa15.24■□□□□ 0.03
CHPF2-202ENST00000465601 EAF2Q96CJ1 260 aaPredicted RBP15.24■□□□□ 0.03
CHPF2-202ENST00000465601 DBNDD2Q9BQY9 259 aa15.24■□□□□ 0.03
CHPF2-202ENST00000465601 MYOZ2Q9NPC6 264 aa15.24■□□□□ 0.03
CHPF2-202ENST00000465601 HDAC9Q9UKV0 1011 aa15.24■□□□□ 0.03
CHPF2-202ENST00000465601 ADAMTSL1Q8N6G6 1762 aa15.24■□□□□ 0.03
CHPF2-202ENST00000465601 RAB11FIP3O75154 756 aa15.23■□□□□ 0.03
CHPF2-202ENST00000465601 GRIK5Q16478 980 aa15.23■□□□□ 0.03
CHPF2-202ENST00000465601 CNTROBQ8N137 903 aa15.23■□□□□ 0.03
CHPF2-202ENST00000465601 TBC1D22AQ8WUA7 517 aa15.23■□□□□ 0.03
CHPF2-202ENST00000465601 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
CHPF2-202ENST00000465601 DENND2AQ9ULE3 1009 aa15.23■□□□□ 0.03
CHPF2-202ENST00000465601 SEMA3EO15041 775 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 SCARF1Q14162 830 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 AACSQ86V21 672 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 WDR66Q8TBY9 1149 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 TLR7Q9NYK1 1049 aaKnown RBP15.22■□□□□ 0.03
CHPF2-202ENST00000465601 PGAP2Q9UHJ9 254 aa15.22■□□□□ 0.03
CHPF2-202ENST00000465601 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
CHPF2-202ENST00000465601 TTF2Q9UNY4 1162 aaKnown RBP15.22■□□□□ 0.03
CHPF2-202ENST00000465601 COL1A1P02452 1464 aaPredicted RBP15.21■□□□□ 0.03
CHPF2-202ENST00000465601 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
CHPF2-202ENST00000465601 MMP14P50281 582 aa15.21■□□□□ 0.03
CHPF2-202ENST00000465601 CCDC158Q5M9N0 1113 aa15.21■□□□□ 0.03
CHPF2-202ENST00000465601 CLASRPQ8N2M8 674 aaKnown RBP15.21■□□□□ 0.03
CHPF2-202ENST00000465601 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
CHPF2-202ENST00000465601 PCDHAC2Q9Y5I4 1007 aa15.21■□□□□ 0.03
CHPF2-202ENST00000465601 AKAP11Q9UKA4 1901 aa15.2■□□□□ 0.02
CHPF2-202ENST00000465601 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
CHPF2-202ENST00000465601 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
CHPF2-202ENST00000465601 AAMPQ13685 434 aa15.2■□□□□ 0.02
CHPF2-202ENST00000465601 NBPF9Q3BBW0 867 aa15.2■□□□□ 0.02
CHPF2-202ENST00000465601 TTC39AQ5SRH9 613 aa15.2■□□□□ 0.02
CHPF2-202ENST00000465601 HMG20BQ9P0W2 317 aa15.2■□□□□ 0.02
CHPF2-202ENST00000465601 WNT10BO00744 389 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 ZBTB22O15209 634 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 ARID4AP29374 1257 aaPredicted RBP15.19■□□□□ 0.02
CHPF2-202ENST00000465601 RBM5P52756 815 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHPF2-202ENST00000465601 DLGAP5Q15398 846 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 CFAP100Q494V2 611 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 PI16Q6UXB8 463 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 GLIS2Q9BZE0 524 aaPredicted RBP15.19■□□□□ 0.02
CHPF2-202ENST00000465601 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
CHPF2-202ENST00000465601 IFIT2P09913 472 aaKnown RBP15.18■□□□□ 0.02
CHPF2-202ENST00000465601 MCAMP43121 646 aa15.18■□□□□ 0.02
CHPF2-202ENST00000465601 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHPF2-202ENST00000465601 ANGEL2Q5VTE6 544 aaKnown RBP15.18■□□□□ 0.02
CHPF2-202ENST00000465601 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
CHPF2-202ENST00000465601 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
CHPF2-202ENST00000465601 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
CHPF2-202ENST00000465601 ZBED3Q96IU2 234 aaPredicted RBP15.18■□□□□ 0.02
CHPF2-202ENST00000465601 PRMT6Q96LA8 375 aaPredicted RBP15.18■□□□□ 0.02
CHPF2-202ENST00000465601 GGA3Q9NZ52 723 aa15.18■□□□□ 0.02
CHPF2-202ENST00000465601 SUGT1Q9Y2Z0 365 aa15.18■□□□□ 0.02
CHPF2-202ENST00000465601 TRAF5O00463 557 aa15.17■□□□□ 0.02
CHPF2-202ENST00000465601 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
CHPF2-202ENST00000465601 HSPA6P17066 643 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms