RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CNTROBQ8N137 903 aa20.93■□□□□ 0.94
PTPRU-206ENST00000465525 KIAA2012Q0VF49 1180 aa20.92■□□□□ 0.94
PTPRU-206ENST00000465525 CHAF1AQ13111 956 aaPredicted RBP20.92■□□□□ 0.94
PTPRU-206ENST00000465525 ZNF277Q9NRM2 450 aaPredicted RBP20.92■□□□□ 0.94
PTPRU-206ENST00000465525 TBC1D9Q6ZT07 1266 aa20.91■□□□□ 0.94
PTPRU-206ENST00000465525 CD209Q9NNX6 404 aa20.91■□□□□ 0.94
PTPRU-206ENST00000465525 MYH7P12883 1935 aa20.91■□□□□ 0.94
PTPRU-206ENST00000465525 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
PTPRU-206ENST00000465525 PPIP5K2O43314 1243 aa20.9■□□□□ 0.94
PTPRU-206ENST00000465525 CYP2E1P05181 493 aaPredicted RBP20.9■□□□□ 0.94
PTPRU-206ENST00000465525 EVI5LQ96CN4 794 aa20.9■□□□□ 0.94
PTPRU-206ENST00000465525 FSD1Q9BTV5 496 aa20.9■□□□□ 0.94
PTPRU-206ENST00000465525 DBNDD1Q9H9R9 158 aa20.9■□□□□ 0.94
PTPRU-206ENST00000465525 PIH1D3Q9NQM4 214 aaKnown RBP20.9■□□□□ 0.94
PTPRU-206ENST00000465525 G3V3G9 751 aa20.89■□□□□ 0.94
PTPRU-206ENST00000465525 IARSP41252 1262 aaKnown RBP20.89■□□□□ 0.94
PTPRU-206ENST00000465525 RASSF7Q02833 373 aa20.89■□□□□ 0.94
PTPRU-206ENST00000465525 C8orf34Q49A92 452 aa20.89■□□□□ 0.94
PTPRU-206ENST00000465525 DCAF8Q5TAQ9 597 aa20.89■□□□□ 0.94
PTPRU-206ENST00000465525 CCDC88AQ3V6T2 1871 aa20.89■□□□□ 0.93
PTPRU-206ENST00000465525 DOCK2Q92608 1830 aa20.89■□□□□ 0.93
PTPRU-206ENST00000465525 CHGBP05060 677 aa20.89■□□□□ 0.93
PTPRU-206ENST00000465525 LARGE2Q8N3Y3 721 aa20.89■□□□□ 0.93
PTPRU-206ENST00000465525 TDRD7Q8NHU6 1098 aaKnown RBP20.89■□□□□ 0.93
PTPRU-206ENST00000465525 COA1Q9GZY4 146 aa20.89■□□□□ 0.93
PTPRU-206ENST00000465525 DENND2AQ9ULE3 1009 aa20.89■□□□□ 0.93
PTPRU-206ENST00000465525 COL4A5P29400 1685 aa20.88■□□□□ 0.93
PTPRU-206ENST00000465525 SCN9AQ15858 1988 aa20.88■□□□□ 0.93
PTPRU-206ENST00000465525 CDC45O75419 566 aa20.88■□□□□ 0.93
PTPRU-206ENST00000465525 IL1R1P14778 569 aa20.87■□□□□ 0.93
PTPRU-206ENST00000465525 LMNB1P20700 586 aa20.87■□□□□ 0.93
PTPRU-206ENST00000465525 SLFNL1Q499Z3 407 aa20.87■□□□□ 0.93
PTPRU-206ENST00000465525 SEMA3EO15041 775 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 KBTBD3Q8NAB2 608 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 FBXW7Q969H0 707 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 ECE2O60344 883 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 PODNQ7Z5L7 613 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 JDP2Q8WYK2 163 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 KCNQ5Q9NR82 932 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 ABCF2Q9UG63 623 aa20.86■□□□□ 0.93
PTPRU-206ENST00000465525 ZBTB22O15209 634 aa20.85■□□□□ 0.93
PTPRU-206ENST00000465525 IDH1O75874 414 aaKnown RBP20.85■□□□□ 0.93
PTPRU-206ENST00000465525 CHMLP26374 656 aa20.85■□□□□ 0.93
PTPRU-206ENST00000465525 PRELPP51888 382 aa20.85■□□□□ 0.93
PTPRU-206ENST00000465525 GTF2IP78347 998 aa20.84■□□□□ 0.93
PTPRU-206ENST00000465525 NIM1KQ8IY84 436 aa20.84■□□□□ 0.93
PTPRU-206ENST00000465525 ZNF646O15015 1829 aaPredicted RBP20.84■□□□□ 0.93
PTPRU-206ENST00000465525 TTF1Q15361 905 aaPredicted RBP20.83■□□□□ 0.93
PTPRU-206ENST00000465525 DIAPH3Q9NSV4 1193 aa20.83■□□□□ 0.93
PTPRU-206ENST00000465525 UTRNP46939 3433 aa20.83■□□□□ 0.93
PTPRU-206ENST00000465525 FAM227BQ96M60 508 aa20.83■□□□□ 0.92
PTPRU-206ENST00000465525 MXD3Q9BW11 206 aa20.83■□□□□ 0.92
PTPRU-206ENST00000465525 LRP2BPQ9P2M1 347 aa20.83■□□□□ 0.92
PTPRU-206ENST00000465525 ZNRF3Q9ULT6 936 aa20.83■□□□□ 0.92
PTPRU-206ENST00000465525 SEC24BO95487 1268 aa20.82■□□□□ 0.92
PTPRU-206ENST00000465525 NMIQ13287 307 aaPredicted RBP20.82■□□□□ 0.92
PTPRU-206ENST00000465525 CWC27Q6UX04 472 aaKnown RBP20.82■□□□□ 0.92
PTPRU-206ENST00000465525 PDS5AQ29RF7 1337 aaKnown RBP20.82■□□□□ 0.92
PTPRU-206ENST00000465525 YDJCA8MPS7 323 aa20.81■□□□□ 0.92
PTPRU-206ENST00000465525 GRIK5Q16478 980 aa20.81■□□□□ 0.92
PTPRU-206ENST00000465525 BACH2Q9BYV9 841 aa20.81■□□□□ 0.92
PTPRU-206ENST00000465525 IL25Q9H293 177 aa20.81■□□□□ 0.92
PTPRU-206ENST00000465525 RAI14Q9P0K7 980 aa20.81■□□□□ 0.92
PTPRU-206ENST00000465525 PSME4Q14997 1843 aa20.81■□□□□ 0.92
PTPRU-206ENST00000465525 PRDX5P30044 214 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 C9orf131Q5VYM1 1079 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 CASC1Q6TDU7 716 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 WDR66Q8TBY9 1149 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 RNF181Q9P0P0 153 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 SBF1O95248 1867 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 MAST2Q6P0Q8 1798 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 A0A0D9SFI3 127 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 RNF113AO15541 343 aaKnown RBP20.8■□□□□ 0.92
PTPRU-206ENST00000465525 SLC9C2Q5TAH2 1124 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 TTLL5Q6EMB2 1281 aa20.8■□□□□ 0.92
PTPRU-206ENST00000465525 FAM205AQ6ZU69 1335 aa20.79■□□□□ 0.92
PTPRU-206ENST00000465525 FZD9O00144 591 aa20.79■□□□□ 0.92
PTPRU-206ENST00000465525 PDE6AP16499 860 aa20.79■□□□□ 0.92
PTPRU-206ENST00000465525 MFSD14BQ5SR56 506 aa20.79■□□□□ 0.92
PTPRU-206ENST00000465525 MAGEB6Q8N7X4 407 aa20.79■□□□□ 0.92
PTPRU-206ENST00000465525 SEC62Q99442 399 aaKnown RBP20.79■□□□□ 0.92
PTPRU-206ENST00000465525 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.79■□□□□ 0.92
PTPRU-206ENST00000465525 RAD17O75943 681 aa20.78■□□□□ 0.92
PTPRU-206ENST00000465525 MAP3K12Q12852 859 aa20.78■□□□□ 0.92
PTPRU-206ENST00000465525 ERICH6Q7L0X2 663 aa20.78■□□□□ 0.92
PTPRU-206ENST00000465525 ESYT1Q9BSJ8 1104 aa20.78■□□□□ 0.92
PTPRU-206ENST00000465525 RFX7Q2KHR2 1363 aa20.78■□□□□ 0.92
PTPRU-206ENST00000465525 USP17L3A6NCW0 530 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 USP17L4A6NCW7 530 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 ADD2P35612 726 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.92
PTPRU-206ENST00000465525 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 USP17L1Q7RTZ2 530 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 CERS5Q8N5B7 392 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 ZNF532Q9HCE3 1301 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 SALL1Q9NSC2 1324 aa20.77■□□□□ 0.92
PTPRU-206ENST00000465525 DICER1Q9UPY3 1922 aaKnown RBP20.77■□□□□ 0.91
PTPRU-206ENST00000465525 HIP1O00291 1037 aa20.77■□□□□ 0.91
PTPRU-206ENST00000465525 LDHBP07195 334 aaKnown RBP20.77■□□□□ 0.91
PTPRU-206ENST00000465525 EIF6P56537 245 aaKnown RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms