RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 AKAP11Q9UKA4 1901 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 SLX4Q8IY92 1834 aa10.03□□□□□ -0.8
UBE4B-205ENST00000465408 ANKRD31Q8N7Z5 1873 aa10.02□□□□□ -0.8
UBE4B-205ENST00000465408 KIAA0100Q14667 2235 aaKnown RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 RBBP6Q7Z6E9 1792 aaKnown RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 FZD9O00144 591 aa10.02□□□□□ -0.81
UBE4B-205ENST00000465408 EYA2O00167 538 aa10.02□□□□□ -0.81
UBE4B-205ENST00000465408 HOXD11P31277 338 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 IL15P40933 162 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 NMIQ13287 307 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 CCDC24Q8N4L8 307 aa10.02□□□□□ -0.81
UBE4B-205ENST00000465408 ZBTB38Q8NAP3 1195 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 ZNF296Q8WUU4 475 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 FSD1Q9BTV5 496 aa10.02□□□□□ -0.81
UBE4B-205ENST00000465408 GLIS2Q9BZE0 524 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 ZNF277Q9NRM2 450 aaPredicted RBP10.02□□□□□ -0.81
UBE4B-205ENST00000465408 ERVV-1B6SEH8 477 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 HSP90AA1P07900 732 aaKnown RBP10.01□□□□□ -0.81
UBE4B-205ENST00000465408 ATP5JP18859 108 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 SCNN1DP51172 638 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 EIF5P55010 431 aaKnown RBP10.01□□□□□ -0.81
UBE4B-205ENST00000465408 HUNKP57058 714 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 CCDC57Q2TAC2 916 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 TAF7LQ5H9L4 462 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBE4B-205ENST00000465408 LRCH3Q96II8 777 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 FAM227BQ96M60 508 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 NEUROD6Q96NK8 337 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 PLA2G12BQ9BX93 195 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 TRMT112Q9UI30 125 aaKnown RBP10.01□□□□□ -0.81
UBE4B-205ENST00000465408 NDUFB9Q9Y6M9 179 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 CACNA1SQ13698 1873 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 UBN2Q6ZU65 1347 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 RAD50Q92878 1312 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 CDHR2Q9BYE9 1310 aa10.01□□□□□ -0.81
UBE4B-205ENST00000465408 ZNF609O15014 1411 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 FAM177BA6PVY3 158 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 IRS4O14654 1257 aaPredicted RBP10□□□□□ -0.81
UBE4B-205ENST00000465408 ST18O60284 1047 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 CIAO1O76071 339 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 CSF1RP07333 972 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
UBE4B-205ENST00000465408 HSPA4P34932 840 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 DDIT3P35638 169 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 TIMM10P62072 90 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 PTH1RQ03431 593 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 USP50Q70EL3 339 aaPredicted RBP10□□□□□ -0.81
UBE4B-205ENST00000465408 ZNF34Q8IZ26 560 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 FAM122AQ96E09 287 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 CSRNP1Q96S65 589 aa10□□□□□ -0.81
UBE4B-205ENST00000465408 DNAJC2Q99543 621 aaKnown RBP10□□□□□ -0.81
UBE4B-205ENST00000465408 BCORQ6W2J9 1755 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 A0A0D9SFI3 127 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 HIP1O00291 1037 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 CAMTA2O94983 1202 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 NEK4P51957 841 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 CTSWP56202 376 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 ANAPC15P60006 121 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 RGMBQ6NW40 437 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
UBE4B-205ENST00000465408 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
UBE4B-205ENST00000465408 SNX27Q96L92 541 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 GREM2Q9H772 168 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 GPR108Q9NPR9 543 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 GJA3Q9Y6H8 435 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 MUC3AQ02505 3323 aa9.99□□□□□ -0.81
UBE4B-205ENST00000465408 A0A1B0GUL7 405 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 EPB41L2O43491 1005 aaKnown RBP9.98□□□□□ -0.81
UBE4B-205ENST00000465408 ZPR1O75312 459 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 ITGA6P23229 1130 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 ADORA1P30542 326 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
UBE4B-205ENST00000465408 IFIT5Q13325 482 aaKnown RBP9.98□□□□□ -0.81
UBE4B-205ENST00000465408 SUSD4Q5VX71 490 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 DDX46Q7L014 1031 aaKnown RBP9.98□□□□□ -0.81
UBE4B-205ENST00000465408 TTLL11Q8NHH1 800 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 HAUS7Q99871 368 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 UPF3BQ9BZI7 483 aaKnown RBP9.98□□□□□ -0.81
UBE4B-205ENST00000465408 CEP126Q9P2H0 1117 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 STXBP5LQ9Y2K9 1186 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 SNX14Q9Y5W7 946 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 TTC28Q96AY4 2481 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 RIC1Q4ADV7 1423 aa9.98□□□□□ -0.81
UBE4B-205ENST00000465408 ANKRD18BA2A2Z9 1011 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 PDE8AO60658 829 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 TBC1D8O95759 1140 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 CHGBP05060 677 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 HCLS1P14317 486 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-205ENST00000465408 SOGA3Q5TF21 947 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 RASEFQ8IZ41 740 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 IL17RAQ96F46 866 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
UBE4B-205ENST00000465408 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 MED23Q9ULK4 1368 aa9.97□□□□□ -0.81
UBE4B-205ENST00000465408 ANKRD36CQ5JPF3 1778 aa9.96□□□□□ -0.81
UBE4B-205ENST00000465408 AK9Q5TCS8 1911 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms