RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 TMEM102Q8N9M5 508 aaPredicted RBP7.84□□□□□ -1.15
VPS8-217ENST00000465213 PMEPA1Q969W9 287 aa7.84□□□□□ -1.15
VPS8-217ENST00000465213 RUSC1Q9BVN2 902 aa7.84□□□□□ -1.15
VPS8-217ENST00000465213 CHRDQ9H2X0 955 aa7.84□□□□□ -1.15
VPS8-217ENST00000465213 WNT11O96014 354 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 PDGFAP04085 211 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 PCSK2P16519 638 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 C19orf57Q0VDD7 668 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 FDX2Q6P4F2 183 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 EDEM1Q92611 657 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 GGNBP2Q9H3C7 697 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 USTQ9Y2C2 406 aa7.83□□□□□ -1.16
VPS8-217ENST00000465213 ARL4DP49703 201 aa7.82□□□□□ -1.16
VPS8-217ENST00000465213 HHIPQ96QV1 700 aa7.82□□□□□ -1.16
VPS8-217ENST00000465213 KCNF1Q9H3M0 494 aa7.82□□□□□ -1.16
VPS8-217ENST00000465213 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
VPS8-217ENST00000465213 MZF1P28698 734 aaPredicted RBP7.81□□□□□ -1.16
VPS8-217ENST00000465213 DNM1Q05193 864 aaKnown RBP7.81□□□□□ -1.16
VPS8-217ENST00000465213 NOM1Q5C9Z4 860 aaKnown RBP7.81□□□□□ -1.16
VPS8-217ENST00000465213 BSNDQ8WZ55 320 aa7.81□□□□□ -1.16
VPS8-217ENST00000465213 NXPE3Q969Y0 559 aa7.81□□□□□ -1.16
VPS8-217ENST00000465213 TMPRSS13Q9BYE2 586 aa7.81□□□□□ -1.16
VPS8-217ENST00000465213 SOX17Q9H6I2 414 aaPredicted RBP7.81□□□□□ -1.16
VPS8-217ENST00000465213 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
VPS8-217ENST00000465213 TIAF1O95411 115 aa7.8□□□□□ -1.16
VPS8-217ENST00000465213 MAP4P27816 1152 aaKnown RBP7.8□□□□□ -1.16
VPS8-217ENST00000465213 CPSF6Q16630 551 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS8-217ENST00000465213 HGSNATQ68CP4 663 aa7.8□□□□□ -1.16
VPS8-217ENST00000465213 VN1R5Q7Z5H4 357 aa7.8□□□□□ -1.16
VPS8-217ENST00000465213 RETREG2Q8NC44 543 aa7.8□□□□□ -1.16
VPS8-217ENST00000465213 SMG8Q8ND04 991 aaKnown RBP7.8□□□□□ -1.16
VPS8-217ENST00000465213 SLC7A3Q8WY07 619 aa7.8□□□□□ -1.16
VPS8-217ENST00000465213 WDR64B1ANS9 1081 aa7.79□□□□□ -1.16
VPS8-217ENST00000465213 SOX1O00570 391 aaPredicted RBP7.79□□□□□ -1.16
VPS8-217ENST00000465213 GAS2O43903 313 aaKnown RBP7.79□□□□□ -1.16
VPS8-217ENST00000465213 TRPA1O75762 1119 aa7.79□□□□□ -1.16
VPS8-217ENST00000465213 YBX3P16989 372 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS8-217ENST00000465213 EIF1AXP47813 144 aaKnown RBP7.79□□□□□ -1.16
VPS8-217ENST00000465213 GTF3C2Q8WUA4 911 aaPredicted RBP7.79□□□□□ -1.16
VPS8-217ENST00000465213 OSMRQ99650 979 aa7.79□□□□□ -1.16
VPS8-217ENST00000465213 PIM2Q9P1W9 311 aa7.79□□□□□ -1.16
VPS8-217ENST00000465213 ADGRE2Q9UHX3 823 aa7.79□□□□□ -1.16
VPS8-217ENST00000465213 RNF114Q9Y508 228 aa7.79□□□□□ -1.16
VPS8-217ENST00000465213 ARID1BQ8NFD5 2236 aaPredicted RBP7.79□□□□□ -1.16
VPS8-217ENST00000465213 A6NHS1 94 aa7.78□□□□□ -1.16
VPS8-217ENST00000465213 IKBKEQ14164 716 aa7.78□□□□□ -1.16
VPS8-217ENST00000465213 SGO2Q562F6 1265 aa7.78□□□□□ -1.16
VPS8-217ENST00000465213 MFSD14AQ96MC6 490 aa7.78□□□□□ -1.16
VPS8-217ENST00000465213 ZKSCAN3Q9BRR0 538 aa7.78□□□□□ -1.16
VPS8-217ENST00000465213 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
VPS8-217ENST00000465213 LOC100289279A0A1B0GTE1 492 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 EDN3P14138 238 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 NPR3P17342 541 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 MPSTP25325 297 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 HOXA10P31260 410 aaPredicted RBP7.77□□□□□ -1.17
VPS8-217ENST00000465213 MSMPQ1L6U9 139 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 C8orf34Q49A92 452 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 NUTM2GQ5VZR2 741 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 ALKBH2Q6NS38 261 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 TTC16Q8NEE8 873 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 GIMAP7Q8NHV1 300 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 CYP4F12Q9HCS2 524 aa7.77□□□□□ -1.17
VPS8-217ENST00000465213 F13BP05160 661 aa7.76□□□□□ -1.17
VPS8-217ENST00000465213 MTMR3Q13615 1198 aa7.76□□□□□ -1.17
VPS8-217ENST00000465213 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
VPS8-217ENST00000465213 EREGO14944 169 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
VPS8-217ENST00000465213 TNFRSF21O75509 655 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 PRNPP04156 253 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 FOSL1P15407 271 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 EHHADHQ08426 723 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 ATG3Q9NT62 314 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 POLIQ9UNA4 740 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 LEMD3Q9Y2U8 911 aa7.75□□□□□ -1.17
VPS8-217ENST00000465213 PHACTR2O75167 634 aa7.74□□□□□ -1.17
VPS8-217ENST00000465213 DLGAP3O95886 979 aa7.74□□□□□ -1.17
VPS8-217ENST00000465213 ESRRAP11474 423 aaPredicted RBP7.74□□□□□ -1.17
VPS8-217ENST00000465213 C12orf50Q8NA57 414 aaPredicted RBP7.74□□□□□ -1.17
VPS8-217ENST00000465213 USP26Q9BXU7 913 aa7.74□□□□□ -1.17
VPS8-217ENST00000465213 FAM95CA0A1B0GW59 222 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 USP5P45974 858 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 EXOSC6Q5RKV6 272 aaKnown RBP7.73□□□□□ -1.17
VPS8-217ENST00000465213 PEAR1Q5VY43 1037 aaPredicted RBP7.73□□□□□ -1.17
VPS8-217ENST00000465213 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 HOMEZQ8IX15 550 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 ABI1Q8IZP0 508 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 METTL22Q9BUU2 404 aaPredicted RBP7.73□□□□□ -1.17
VPS8-217ENST00000465213 NRSN2Q9GZP1 204 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 MTMR7Q9Y216 660 aa7.73□□□□□ -1.17
VPS8-217ENST00000465213 RXRBP28702 533 aa7.72□□□□□ -1.17
VPS8-217ENST00000465213 PAOXQ6QHF9 649 aa7.72□□□□□ -1.17
VPS8-217ENST00000465213 NFXL1Q6ZNB6 911 aa7.72□□□□□ -1.17
VPS8-217ENST00000465213 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
VPS8-217ENST00000465213 C2CD4AQ8NCU7 369 aaPredicted RBP7.72□□□□□ -1.17
VPS8-217ENST00000465213 EZH1Q92800 747 aaPredicted RBP7.72□□□□□ -1.17
VPS8-217ENST00000465213 OSBPL1AQ9BXW6 950 aa7.72□□□□□ -1.17
VPS8-217ENST00000465213 CCDC39Q9UFE4 941 aa7.72□□□□□ -1.17
VPS8-217ENST00000465213 ABL1P00519 1130 aa7.71□□□□□ -1.18
VPS8-217ENST00000465213 FKBP4Q02790 459 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS8-217ENST00000465213 PDE4CQ08493 712 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms