RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 NTSR2O95665 410 aa12.53□□□□□ -0.4
APP-213ENST00000464867 INHBEP58166 350 aa12.53□□□□□ -0.4
APP-213ENST00000464867 MOB2Q70IA6 237 aa12.53□□□□□ -0.4
APP-213ENST00000464867 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
APP-213ENST00000464867 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
APP-213ENST00000464867 COL6A3P12111 3177 aa12.53□□□□□ -0.4
APP-213ENST00000464867 UBN2Q6ZU65 1347 aa12.53□□□□□ -0.4
APP-213ENST00000464867 HTTP42858 3142 aa12.52□□□□□ -0.4
APP-213ENST00000464867 C6orf229H3BNL8 230 aa12.52□□□□□ -0.41
APP-213ENST00000464867 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
APP-213ENST00000464867 ECE2O60344 883 aa12.52□□□□□ -0.41
APP-213ENST00000464867 BCAMP50895 628 aa12.52□□□□□ -0.41
APP-213ENST00000464867 SLC10A5Q5PT55 438 aa12.52□□□□□ -0.41
APP-213ENST00000464867 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
APP-213ENST00000464867 DPF3Q92784 378 aa12.52□□□□□ -0.41
APP-213ENST00000464867 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
APP-213ENST00000464867 EYA3Q99504 573 aa12.52□□□□□ -0.41
APP-213ENST00000464867 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
APP-213ENST00000464867 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
APP-213ENST00000464867 ZBTB3Q9H5J0 574 aa12.52□□□□□ -0.41
APP-213ENST00000464867 EFCC1Q9HA90 598 aa12.52□□□□□ -0.41
APP-213ENST00000464867 NSFL1CQ9UNZ2 370 aaKnown RBP12.52□□□□□ -0.41
APP-213ENST00000464867 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.41
APP-213ENST00000464867 GRAPQ13588 217 aa12.51□□□□□ -0.41
APP-213ENST00000464867 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
APP-213ENST00000464867 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
APP-213ENST00000464867 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
APP-213ENST00000464867 GRAPLQ8TC17 118 aaPredicted RBP12.51□□□□□ -0.41
APP-213ENST00000464867 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
APP-213ENST00000464867 CDHR5Q9HBB8 845 aa12.51□□□□□ -0.41
APP-213ENST00000464867 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
APP-213ENST00000464867 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
APP-213ENST00000464867 DDX60Q8IY21 1712 aaKnown RBP12.51□□□□□ -0.41
APP-213ENST00000464867 BRCA2P51587 3418 aa12.5□□□□□ -0.41
APP-213ENST00000464867 MANSC4A6NHS7 340 aaPredicted RBP12.5□□□□□ -0.41
APP-213ENST00000464867 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
APP-213ENST00000464867 ARMC9Q7Z3E5 817 aa12.5□□□□□ -0.41
APP-213ENST00000464867 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
APP-213ENST00000464867 ANKRD36CQ5JPF3 1778 aa12.5□□□□□ -0.41
APP-213ENST00000464867 RANBP2P49792 3224 aaKnown RBP12.49□□□□□ -0.41
APP-213ENST00000464867 VIL1P09327 827 aaKnown RBP12.49□□□□□ -0.41
APP-213ENST00000464867 MYL6BP14649 208 aa12.49□□□□□ -0.41
APP-213ENST00000464867 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
APP-213ENST00000464867 GIGYF2Q6Y7W6 1299 aaKnown RBP12.49□□□□□ -0.41
APP-213ENST00000464867 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
APP-213ENST00000464867 CD99L2Q8TCZ2 262 aa12.49□□□□□ -0.41
APP-213ENST00000464867 CDCA7LQ96GN5 454 aa12.49□□□□□ -0.41
APP-213ENST00000464867 ZNF333Q96JL9 665 aa12.49□□□□□ -0.41
APP-213ENST00000464867 ZC3H12CQ9C0D7 883 aaKnown RBP12.49□□□□□ -0.41
APP-213ENST00000464867 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
APP-213ENST00000464867 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
APP-213ENST00000464867 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
APP-213ENST00000464867 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
APP-213ENST00000464867 MYOZ2Q9NPC6 264 aa12.48□□□□□ -0.41
APP-213ENST00000464867 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
APP-213ENST00000464867 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
APP-213ENST00000464867 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
APP-213ENST00000464867 USP17L8P0C7I0 530 aa12.47□□□□□ -0.41
APP-213ENST00000464867 PRSS12P56730 875 aa12.47□□□□□ -0.41
APP-213ENST00000464867 PRAMEF18Q5VWM3 479 aa12.47□□□□□ -0.41
APP-213ENST00000464867 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
APP-213ENST00000464867 LAMB2P55268 1798 aa12.46□□□□□ -0.41
APP-213ENST00000464867 A0A1W2PPC1 479 aa12.46□□□□□ -0.41
APP-213ENST00000464867 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
APP-213ENST00000464867 SP3Q02447 781 aa12.46□□□□□ -0.41
APP-213ENST00000464867 PTPN12Q05209 780 aaKnown RBP12.46□□□□□ -0.41
APP-213ENST00000464867 MCM10Q7L590 875 aa12.46□□□□□ -0.41
APP-213ENST00000464867 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.41
APP-213ENST00000464867 HTATIP2Q9BUP3 242 aa12.46□□□□□ -0.41
APP-213ENST00000464867 NR2E3Q9Y5X4 410 aa12.46□□□□□ -0.41
APP-213ENST00000464867 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.42
APP-213ENST00000464867 TAF1P21675 1872 aa12.46□□□□□ -0.42
APP-213ENST00000464867 ZNF609O15014 1411 aa12.45□□□□□ -0.42
APP-213ENST00000464867 MYCP01106 439 aaPredicted RBP12.45□□□□□ -0.42
APP-213ENST00000464867 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
APP-213ENST00000464867 PRKG1Q13976 671 aa12.45□□□□□ -0.42
APP-213ENST00000464867 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
APP-213ENST00000464867 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
APP-213ENST00000464867 PACS2Q86VP3 889 aa12.45□□□□□ -0.42
APP-213ENST00000464867 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
APP-213ENST00000464867 SCAF8Q9UPN6 1271 aaKnown RBP12.45□□□□□ -0.42
APP-213ENST00000464867 SMAPO00193 183 aa12.44□□□□□ -0.42
APP-213ENST00000464867 LRRC37AA6NMS7 1700 aa12.44□□□□□ -0.42
APP-213ENST00000464867 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
APP-213ENST00000464867 ZBTB48P10074 688 aaPredicted RBP12.43□□□□□ -0.42
APP-213ENST00000464867 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
APP-213ENST00000464867 GPSM2P81274 684 aa12.43□□□□□ -0.42
APP-213ENST00000464867 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
APP-213ENST00000464867 CRHR2Q13324 411 aa12.43□□□□□ -0.42
APP-213ENST00000464867 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
APP-213ENST00000464867 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
APP-213ENST00000464867 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
APP-213ENST00000464867 TRMT112Q9UI30 125 aaKnown RBP12.43□□□□□ -0.42
APP-213ENST00000464867 ANGEL1Q9UNK9 670 aaKnown RBP12.43□□□□□ -0.42
APP-213ENST00000464867 SCN9AQ15858 1988 aa12.43□□□□□ -0.42
APP-213ENST00000464867 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
APP-213ENST00000464867 WTIPA6NIX2 430 aaPredicted RBP12.42□□□□□ -0.42
APP-213ENST00000464867 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
APP-213ENST00000464867 PNISRQ8TF01 805 aaKnown RBP12.42□□□□□ -0.42
APP-213ENST00000464867 COL25A1Q9BXS0 654 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms