RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PI16Q6UXB8 463 aa10.44□□□□□ -0.74
PTCD3-205ENST00000464541 KLHL23Q8NBE8 558 aa10.44□□□□□ -0.74
PTCD3-205ENST00000464541 GLIS3Q8NEA6 775 aa10.44□□□□□ -0.74
PTCD3-205ENST00000464541 SOX17Q9H6I2 414 aaPredicted RBP10.44□□□□□ -0.74
PTCD3-205ENST00000464541 LINC01387J3KSC0 135 aa10.43□□□□□ -0.74
PTCD3-205ENST00000464541 DEAF1O75398 565 aaPredicted RBP10.43□□□□□ -0.74
PTCD3-205ENST00000464541 GNA15P30679 374 aa10.43□□□□□ -0.74
PTCD3-205ENST00000464541 ITGAEP38570 1179 aa10.43□□□□□ -0.74
PTCD3-205ENST00000464541 TMEM151AQ8N4L1 468 aa10.43□□□□□ -0.74
PTCD3-205ENST00000464541 SETDB2Q96T68 719 aa10.43□□□□□ -0.74
PTCD3-205ENST00000464541 CLEC4MQ9H2X3 399 aaPredicted RBP10.43□□□□□ -0.74
PTCD3-205ENST00000464541 METTL12A8MUP2 240 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 FSCN2O14926 492 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 GDF11O95390 407 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 APBA3O96018 575 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 ARL4DP49703 201 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 IKBKEQ14164 716 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 SEC31BQ9NQW1 1179 aa10.42□□□□□ -0.74
PTCD3-205ENST00000464541 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
PTCD3-205ENST00000464541 DLL1O00548 723 aa10.41□□□□□ -0.74
PTCD3-205ENST00000464541 SPRED3Q2MJR0 410 aa10.41□□□□□ -0.74
PTCD3-205ENST00000464541 IGF2-ASQ6U949 168 aa10.41□□□□□ -0.74
PTCD3-205ENST00000464541 ZNF576Q9H609 170 aa10.41□□□□□ -0.74
PTCD3-205ENST00000464541 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
PTCD3-205ENST00000464541 C9orf172C9J069 976 aa10.4□□□□□ -0.74
PTCD3-205ENST00000464541 GSTT1P30711 240 aa10.4□□□□□ -0.74
PTCD3-205ENST00000464541 NXPE4Q6UWF7 544 aa10.4□□□□□ -0.74
PTCD3-205ENST00000464541 DUSP9Q99956 384 aaKnown RBP10.4□□□□□ -0.74
PTCD3-205ENST00000464541 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.74
PTCD3-205ENST00000464541 C12orf49Q9H741 205 aa10.4□□□□□ -0.74
PTCD3-205ENST00000464541 KRBA1A5PL33 1030 aa10.39□□□□□ -0.75
PTCD3-205ENST00000464541 ESRRAP11474 423 aaPredicted RBP10.39□□□□□ -0.75
PTCD3-205ENST00000464541 NRG1Q02297 640 aaPredicted RBP10.39□□□□□ -0.75
PTCD3-205ENST00000464541 PCDH1Q08174 1060 aa10.39□□□□□ -0.75
PTCD3-205ENST00000464541 C19orf57Q0VDD7 668 aa10.39□□□□□ -0.75
PTCD3-205ENST00000464541 ZNF326Q5BKZ1 582 aaKnown RBP10.39□□□□□ -0.75
PTCD3-205ENST00000464541 DTHD1Q6ZMT9 781 aa10.39□□□□□ -0.75
PTCD3-205ENST00000464541 LENG1Q96BZ8 264 aaPredicted RBP10.39□□□□□ -0.75
PTCD3-205ENST00000464541 BCL11AQ9H165 835 aa10.39□□□□□ -0.75
PTCD3-205ENST00000464541 FAM8A1Q9UBU6 413 aa10.39□□□□□ -0.75
PTCD3-205ENST00000464541 SOX1O00570 391 aaPredicted RBP10.38□□□□□ -0.75
PTCD3-205ENST00000464541 CD68P34810 354 aaPredicted RBP10.38□□□□□ -0.75
PTCD3-205ENST00000464541 SUZ12Q15022 739 aaKnown RBP10.38□□□□□ -0.75
PTCD3-205ENST00000464541 TXNDC11Q6PKC3 985 aa10.38□□□□□ -0.75
PTCD3-205ENST00000464541 DDX54Q8TDD1 881 aaKnown RBP10.38□□□□□ -0.75
PTCD3-205ENST00000464541 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
PTCD3-205ENST00000464541 OSBPL7Q9BZF2 842 aa10.38□□□□□ -0.75
PTCD3-205ENST00000464541 PPM1HQ9ULR3 514 aa10.38□□□□□ -0.75
PTCD3-205ENST00000464541 TM4SF5O14894 197 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 B3GALT4O96024 378 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 EIF4BP23588 611 aaKnown RBP10.37□□□□□ -0.75
PTCD3-205ENST00000464541 CDC25BP30305 580 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 FCGRTP55899 365 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 DAB2P98082 770 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
PTCD3-205ENST00000464541 GRIK4Q16099 956 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 GALNT11Q8NCW6 608 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
PTCD3-205ENST00000464541 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 AK5Q9Y6K8 562 aa10.37□□□□□ -0.75
PTCD3-205ENST00000464541 SELPP16109 830 aa10.36□□□□□ -0.75
PTCD3-205ENST00000464541 TMC4Q7Z404 712 aa10.36□□□□□ -0.75
PTCD3-205ENST00000464541 ZNF423Q2M1K9 1284 aa10.35□□□□□ -0.75
PTCD3-205ENST00000464541 C3orf58Q8NDZ4 430 aa10.35□□□□□ -0.75
PTCD3-205ENST00000464541 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
PTCD3-205ENST00000464541 KLHDC7BQ96G42 594 aa10.35□□□□□ -0.75
PTCD3-205ENST00000464541 CARD10Q9BWT7 1032 aa10.35□□□□□ -0.75
PTCD3-205ENST00000464541 PSMD2Q13200 908 aa10.34□□□□□ -0.75
PTCD3-205ENST00000464541 FOXD4L6Q3SYB3 417 aaPredicted RBP10.34□□□□□ -0.75
PTCD3-205ENST00000464541 FOXD4L3Q6VB84 417 aaPredicted RBP10.34□□□□□ -0.75
PTCD3-205ENST00000464541 TMEM130Q8N3G9 435 aa10.34□□□□□ -0.75
PTCD3-205ENST00000464541 GIPC2Q8TF65 315 aa10.34□□□□□ -0.75
PTCD3-205ENST00000464541 RBM47A0AV96 593 aaKnown RBP10.32□□□□□ -0.76
PTCD3-205ENST00000464541 USP17L7P0C7H9 530 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 ADGRE1Q14246 886 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 PLA2G4EQ3MJ16 856 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 SHISA2Q6UWI4 295 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 CD163Q86VB7 1156 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 CEP44Q9C0F1 390 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 USP21Q9UK80 565 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 AKAP2Q9Y2D5 859 aa10.32□□□□□ -0.76
PTCD3-205ENST00000464541 C1QTNF9BB2RNN3 333 aa10.31□□□□□ -0.76
PTCD3-205ENST00000464541 CHRNA4P43681 627 aa10.31□□□□□ -0.76
PTCD3-205ENST00000464541 PPP2R3AQ06190 1150 aa10.31□□□□□ -0.76
PTCD3-205ENST00000464541 SORBS3O60504 671 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 CYP11A1P05108 521 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
PTCD3-205ENST00000464541 TAGLNQ01995 201 aaKnown RBP10.3□□□□□ -0.76
PTCD3-205ENST00000464541 GSTM4Q03013 218 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 FAAP100Q0VG06 881 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 AP3B2Q13367 1082 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 MBTPS1Q14703 1052 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 HP1BP3Q5SSJ5 553 aaPredicted RBP10.3□□□□□ -0.76
PTCD3-205ENST00000464541 RGS22Q8NE09 1264 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
PTCD3-205ENST00000464541 MRS2Q9HD23 443 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 TMEM39AQ9NV64 488 aa10.3□□□□□ -0.76
PTCD3-205ENST00000464541 ADAM11O75078 769 aa10.29□□□□□ -0.76
PTCD3-205ENST00000464541 IGHA1P01876 353 aa10.29□□□□□ -0.76
PTCD3-205ENST00000464541 DUOXA2Q1HG44 320 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms