RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 HAND2P61296 217 aa23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 FAM173BQ6P4H8 233 aa23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 RBSNQ9H1K0 784 aa23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 GTF2E1P29083 439 aaPredicted RBP23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 C3orf67Q6ZVT6 689 aa23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 DDX60Q8IY21 1712 aaKnown RBP23.36■■□□□ 1.33
POLR2J3-203ENST00000464525 SPEF2Q9C093 1822 aa23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 AKAP11Q9UKA4 1901 aa23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 NASPP49321 788 aaPredicted RBP23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 TXNRD1Q16881 649 aa23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 SETDB2Q96T68 719 aa23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 CCDC102BQ68D86 513 aa23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 DHX32Q7L7V1 743 aaKnown RBP23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 GTF3C6Q969F1 213 aa23.35■■□□□ 1.33
POLR2J3-203ENST00000464525 APBA3O96018 575 aa23.34■■□□□ 1.33
POLR2J3-203ENST00000464525 SLC27A3Q5K4L6 730 aa23.34■■□□□ 1.33
POLR2J3-203ENST00000464525 APOBRQ0VD83 1088 aa23.34■■□□□ 1.33
POLR2J3-203ENST00000464525 PIH1D3Q9NQM4 214 aaKnown RBP23.34■■□□□ 1.33
POLR2J3-203ENST00000464525 MYO5AQ9Y4I1 1855 aaKnown RBP23.33■■□□□ 1.33
POLR2J3-203ENST00000464525 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
POLR2J3-203ENST00000464525 FBXO41Q8TF61 875 aa23.33■■□□□ 1.33
POLR2J3-203ENST00000464525 DDX11Q96FC9 970 aa23.33■■□□□ 1.33
POLR2J3-203ENST00000464525 PPFIA3O75145 1194 aa23.33■■□□□ 1.32
POLR2J3-203ENST00000464525 FGAP02671 866 aa23.33■■□□□ 1.32
POLR2J3-203ENST00000464525 SCRN1Q12765 414 aa23.33■■□□□ 1.32
POLR2J3-203ENST00000464525 TICAM2Q86XR7 235 aa23.33■■□□□ 1.32
POLR2J3-203ENST00000464525 TMEM87AQ8NBN3 555 aa23.33■■□□□ 1.32
POLR2J3-203ENST00000464525 ZFYP08048 801 aaPredicted RBP23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 EXOSC10Q01780 885 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 CCDC152Q4G0S7 254 aa23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 NBPF5PQ86XG9 351 aaPredicted RBP23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 APPBP2Q92624 585 aa23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 ATP6V1DQ9Y5K8 247 aa23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 ABCC12Q96J65 1359 aa23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 IDH1O75874 414 aaKnown RBP23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 SLC9C2Q5TAH2 1124 aa23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 LRSAM1Q6UWE0 723 aa23.32■■□□□ 1.32
POLR2J3-203ENST00000464525 GPAA1O43292 621 aa23.31■■□□□ 1.32
POLR2J3-203ENST00000464525 MPHOSPH8Q99549 860 aa23.31■■□□□ 1.32
POLR2J3-203ENST00000464525 GPHNQ9NQX3 736 aaPredicted RBP23.31■■□□□ 1.32
POLR2J3-203ENST00000464525 PUM3Q15397 648 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-203ENST00000464525 LRRFIP1Q32MZ4 808 aaKnown RBP23.31■■□□□ 1.32
POLR2J3-203ENST00000464525 HMGB1P09429 215 aaKnown RBP23.3■■□□□ 1.32
POLR2J3-203ENST00000464525 FGFR2P21802 821 aa23.3■■□□□ 1.32
POLR2J3-203ENST00000464525 NAP1L2Q9ULW6 460 aaPredicted RBP23.3■■□□□ 1.32
POLR2J3-203ENST00000464525 CCT2P78371 535 aaKnown RBP23.3■■□□□ 1.32
POLR2J3-203ENST00000464525 LPIN2Q92539 896 aa23.3■■□□□ 1.32
POLR2J3-203ENST00000464525 UBR3Q6ZT12 1888 aa23.29■■□□□ 1.32
POLR2J3-203ENST00000464525 NCOA5Q9HCD5 579 aaKnown RBP23.29■■□□□ 1.32
POLR2J3-203ENST00000464525 RRAGDQ9NQL2 400 aaPredicted RBP23.29■■□□□ 1.32
POLR2J3-203ENST00000464525 MROH5Q6ZUA9 1318 aa23.29■■□□□ 1.32
POLR2J3-203ENST00000464525 PDCP20941 246 aa23.28■■□□□ 1.32
POLR2J3-203ENST00000464525 ADD2P35612 726 aa23.28■■□□□ 1.32
POLR2J3-203ENST00000464525 WWC3Q9ULE0 1092 aa23.28■■□□□ 1.32
POLR2J3-203ENST00000464525 COL4A1P02462 1669 aa23.28■■□□□ 1.32
POLR2J3-203ENST00000464525 MYH7P12883 1935 aa23.28■■□□□ 1.32
POLR2J3-203ENST00000464525 NFIXQ14938 502 aa23.28■■□□□ 1.32
POLR2J3-203ENST00000464525 RGL2O15211 777 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 NPHP1O15259 732 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 ZNF512BQ96KM6 892 aaPredicted RBP23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 TAF1P21675 1872 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 ARID4AP29374 1257 aaPredicted RBP23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 FOSBP53539 338 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 UBE2HP62256 183 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 RNF214Q8ND24 703 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 NYXQ9GZU5 481 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 LAMB2P55268 1798 aa23.27■■□□□ 1.32
POLR2J3-203ENST00000464525 PFKFB2O60825 505 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 TPTE2Q6XPS3 522 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 FAM43AQ8N2R8 423 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 TFIP11Q9UBB9 837 aaKnown RBP23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 ZNF532Q9HCE3 1301 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 CTDNEP1O95476 244 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 ADRA2BP18089 450 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 IMMTQ16891 758 aaKnown RBP23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 AGXT2Q9BYV1 514 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 DENND2AQ9ULE3 1009 aa23.26■■□□□ 1.31
POLR2J3-203ENST00000464525 WTIPA6NIX2 430 aaPredicted RBP23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 RASGRF1Q13972 1273 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 PODXL2Q9NZ53 605 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 CTNNA3Q9UI47 895 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 PLSCR1O15162 318 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 GYS1P13807 737 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 BCAMP50895 628 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 TTC6Q86TZ1 520 aa23.25■■□□□ 1.31
POLR2J3-203ENST00000464525 SLC5A1P13866 664 aa23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 PDE6AP16499 860 aa23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 SPATA5Q8NB90 893 aa23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 NSUN7Q8NE18 718 aaKnown RBP23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 NKX2-3Q8TAU0 364 aa23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 SYAP1Q96A49 352 aaPredicted RBP23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 TTF1Q15361 905 aaPredicted RBP23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 SLC10A5Q5PT55 438 aa23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 ANO8Q9HCE9 1232 aaPredicted RBP23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 TFCP2L1Q9NZI6 479 aa23.24■■□□□ 1.31
POLR2J3-203ENST00000464525 LRP5O75197 1615 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms