RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TFCP2Q12800 502 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 OGFOD1Q8N543 542 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 SSH3Q8TE77 659 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 ZC3H15Q8WU90 426 aaKnown RBP21.11■□□□□ 0.97
VPS52-215ENST00000464425 MYOZ2Q9NPC6 264 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 PGAP2Q9UHJ9 254 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 ZNF609O15014 1411 aa21.11■□□□□ 0.97
VPS52-215ENST00000464425 F8W031 263 aaPredicted RBP21.1■□□□□ 0.97
VPS52-215ENST00000464425 TRAF5O00463 557 aa21.1■□□□□ 0.97
VPS52-215ENST00000464425 FMR1Q06787 632 aaKnown RBP eCLIP21.1■□□□□ 0.97
VPS52-215ENST00000464425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.1■□□□□ 0.97
VPS52-215ENST00000464425 ASTN2O75129 1339 aaPredicted RBP21.09■□□□□ 0.97
VPS52-215ENST00000464425 TIMM10P62072 90 aa21.09■□□□□ 0.97
VPS52-215ENST00000464425 CHAF1AQ13111 956 aaPredicted RBP21.09■□□□□ 0.97
VPS52-215ENST00000464425 SCARF1Q14162 830 aa21.09■□□□□ 0.97
VPS52-215ENST00000464425 CEP85Q6P2H3 762 aa21.09■□□□□ 0.97
VPS52-215ENST00000464425 GLIS2Q9BZE0 524 aaPredicted RBP21.09■□□□□ 0.97
VPS52-215ENST00000464425 CHMP4BQ9H444 224 aaKnown RBP21.09■□□□□ 0.97
VPS52-215ENST00000464425 ZBTB40Q9NUA8 1239 aa21.09■□□□□ 0.97
VPS52-215ENST00000464425 CEP350Q5VT06 3117 aa21.09■□□□□ 0.97
VPS52-215ENST00000464425 FAM205AQ6ZU69 1335 aa21.08■□□□□ 0.97
VPS52-215ENST00000464425 SURF6O75683 361 aaKnown RBP21.08■□□□□ 0.97
VPS52-215ENST00000464425 ADORA1P30542 326 aa21.08■□□□□ 0.97
VPS52-215ENST00000464425 OS9Q13438 667 aaPredicted RBP21.08■□□□□ 0.97
VPS52-215ENST00000464425 USP48Q86UV5 1035 aa21.08■□□□□ 0.97
VPS52-215ENST00000464425 HDAC9Q9UKV0 1011 aa21.08■□□□□ 0.97
VPS52-215ENST00000464425 MFSD14BQ5SR56 506 aa21.07■□□□□ 0.96
VPS52-215ENST00000464425 DCPSQ96C86 337 aaKnown RBP21.07■□□□□ 0.96
VPS52-215ENST00000464425 FKBP1AP62942 108 aaKnown RBP21.06■□□□□ 0.96
VPS52-215ENST00000464425 NBPF9Q3BBW0 867 aa21.06■□□□□ 0.96
VPS52-215ENST00000464425 DLK2Q6UY11 383 aa21.06■□□□□ 0.96
VPS52-215ENST00000464425 CDC37L1Q7L3B6 337 aa21.06■□□□□ 0.96
VPS52-215ENST00000464425 NEUROD6Q96NK8 337 aa21.06■□□□□ 0.96
VPS52-215ENST00000464425 AKAP2Q9Y2D5 859 aa21.06■□□□□ 0.96
VPS52-215ENST00000464425 ZNF646O15015 1829 aaPredicted RBP21.06■□□□□ 0.96
VPS52-215ENST00000464425 A0A1B0GUL7 405 aa21.05■□□□□ 0.96
VPS52-215ENST00000464425 ANGEL2Q5VTE6 544 aaKnown RBP21.05■□□□□ 0.96
VPS52-215ENST00000464425 KRT26Q7Z3Y9 468 aa21.05■□□□□ 0.96
VPS52-215ENST00000464425 GGA3Q9NZ52 723 aa21.05■□□□□ 0.96
VPS52-215ENST00000464425 TMEM88BA6NKF7 163 aa21.04■□□□□ 0.96
VPS52-215ENST00000464425 PHKA1P46020 1223 aa21.04■□□□□ 0.96
VPS52-215ENST00000464425 XAGE2Q96GT9 111 aa21.04■□□□□ 0.96
VPS52-215ENST00000464425 CREBZFQ9NS37 354 aa21.04■□□□□ 0.96
VPS52-215ENST00000464425 GNL3LQ9NVN8 582 aaKnown RBP21.04■□□□□ 0.96
VPS52-215ENST00000464425 ADM5C9JUS6 153 aa21.03■□□□□ 0.96
VPS52-215ENST00000464425 WNT10BO00744 389 aa21.03■□□□□ 0.96
VPS52-215ENST00000464425 MMP14P50281 582 aa21.03■□□□□ 0.96
VPS52-215ENST00000464425 GRIK5Q16478 980 aa21.03■□□□□ 0.96
VPS52-215ENST00000464425 DNAJC5GQ8N7S2 189 aa21.03■□□□□ 0.96
VPS52-215ENST00000464425 TTF2Q9UNY4 1162 aaKnown RBP21.03■□□□□ 0.96
VPS52-215ENST00000464425 SCAF8Q9UPN6 1271 aaKnown RBP21.03■□□□□ 0.96
VPS52-215ENST00000464425 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
VPS52-215ENST00000464425 PCDHAC2Q9Y5I4 1007 aa21.03■□□□□ 0.96
VPS52-215ENST00000464425 RBM5P52756 815 aaKnown RBP eCLIP21.02■□□□□ 0.96
VPS52-215ENST00000464425 DLGAP5Q15398 846 aa21.02■□□□□ 0.96
VPS52-215ENST00000464425 CCDC102BQ68D86 513 aa21.02■□□□□ 0.96
VPS52-215ENST00000464425 SULF1Q8IWU6 871 aa21.02■□□□□ 0.96
VPS52-215ENST00000464425 RPAP2Q8IXW5 612 aaPredicted RBP21.02■□□□□ 0.96
VPS52-215ENST00000464425 TBC1D22AQ8WUA7 517 aa21.02■□□□□ 0.96
VPS52-215ENST00000464425 ZNF408Q9H9D4 720 aa21.02■□□□□ 0.96
VPS52-215ENST00000464425 CELF2O95319 508 aaKnown RBP21.01■□□□□ 0.95
VPS52-215ENST00000464425 CFAP100Q494V2 611 aa21.01■□□□□ 0.95
VPS52-215ENST00000464425 CST9Q5W186 159 aa21.01■□□□□ 0.95
VPS52-215ENST00000464425 SIRT2Q8IXJ6 389 aa21.01■□□□□ 0.95
VPS52-215ENST00000464425 EXOC6BQ9Y2D4 811 aa21.01■□□□□ 0.95
VPS52-215ENST00000464425 POLR2AP24928 1970 aaKnown RBP21.01■□□□□ 0.95
VPS52-215ENST00000464425 GORABQ5T7V8 394 aa21■□□□□ 0.95
VPS52-215ENST00000464425 ZBED3Q96IU2 234 aaPredicted RBP21■□□□□ 0.95
VPS52-215ENST00000464425 HMMRO75330 724 aa20.99■□□□□ 0.95
VPS52-215ENST00000464425 WDR66Q8TBY9 1149 aa20.99■□□□□ 0.95
VPS52-215ENST00000464425 PRMT6Q96LA8 375 aaPredicted RBP20.99■□□□□ 0.95
VPS52-215ENST00000464425 ABT1Q9ULW3 272 aaKnown RBP20.99■□□□□ 0.95
VPS52-215ENST00000464425 AAMPQ13685 434 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 TNNI3KQ59H18 835 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 MTMR14Q8NCE2 650 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 KLRG1Q96E93 195 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 CRBNQ96SW2 442 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 MKRN1Q9UHC7 482 aaKnown RBP20.98■□□□□ 0.95
VPS52-215ENST00000464425 DENND2AQ9ULE3 1009 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 FPGT-TNNI3KV9GXZ4 949 aa20.98■□□□□ 0.95
VPS52-215ENST00000464425 COL1A1P02452 1464 aaPredicted RBP20.98■□□□□ 0.95
VPS52-215ENST00000464425 SPDYE2BA6NHP3 402 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 SEMA3EO15041 775 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 SPDYE6P0CI01 402 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 RASGRF1Q13972 1273 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 GPR108Q9NPR9 543 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 SERPINA10Q9UK55 444 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 AOX1Q06278 1338 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 PITPNM2Q9BZ72 1349 aa20.97■□□□□ 0.95
VPS52-215ENST00000464425 CLRN2A0PK11 232 aa20.96■□□□□ 0.95
VPS52-215ENST00000464425 APBB1O00213 710 aa20.96■□□□□ 0.95
VPS52-215ENST00000464425 CRKP46108 304 aa20.96■□□□□ 0.95
VPS52-215ENST00000464425 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
VPS52-215ENST00000464425 MYO1BO43795 1136 aa20.95■□□□□ 0.94
VPS52-215ENST00000464425 HSP90AB4PQ58FF6 505 aa20.95■□□□□ 0.94
VPS52-215ENST00000464425 ERC1Q8IUD2 1116 aa20.95■□□□□ 0.94
VPS52-215ENST00000464425 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
VPS52-215ENST00000464425 DBNDD2Q9BQY9 259 aa20.95■□□□□ 0.94
VPS52-215ENST00000464425 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
VPS52-215ENST00000464425 SUGT1Q9Y2Z0 365 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms