RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SNAP23O00161 211 aa25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 IDH1O75874 414 aaKnown RBP25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 NLRP3Q96P20 1036 aa25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 STX6O43752 255 aa25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 SYT1P21579 422 aa25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 RASGRF1Q13972 1273 aa25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 DDX49Q9Y6V7 483 aaKnown RBP25.78■■□□□ 1.72
PDLIM2-216ENST00000464275 CHD4Q14839 1912 aa25.77■■□□□ 1.72
PDLIM2-216ENST00000464275 FOXP2O15409 715 aa25.77■■□□□ 1.72
PDLIM2-216ENST00000464275 PDIA4P13667 645 aaKnown RBP25.77■■□□□ 1.72
PDLIM2-216ENST00000464275 PDE6AP16499 860 aa25.77■■□□□ 1.72
PDLIM2-216ENST00000464275 RFC4P35249 363 aa25.77■■□□□ 1.72
PDLIM2-216ENST00000464275 AMIGO3Q86WK7 504 aa25.77■■□□□ 1.72
PDLIM2-216ENST00000464275 ZSCAN22P10073 491 aaPredicted RBP25.76■■□□□ 1.72
PDLIM2-216ENST00000464275 UBE4AQ14139 1066 aa25.76■■□□□ 1.72
PDLIM2-216ENST00000464275 IMMTQ16891 758 aaKnown RBP25.76■■□□□ 1.72
PDLIM2-216ENST00000464275 FAM196AQ6ZSG2 479 aa25.76■■□□□ 1.72
PDLIM2-216ENST00000464275 ZNF532Q9HCE3 1301 aa25.76■■□□□ 1.71
PDLIM2-216ENST00000464275 FGAP02671 866 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 ADRA2BP18089 450 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 BCAMP50895 628 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 EXOSC10Q01780 885 aaKnown RBP25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 MAP3K12Q12852 859 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 TTLL5Q6EMB2 1281 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 A0A0G2JLW4 131 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 TCRBV5S4A2TA0A5A2 114 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 PRPF40AO75400 957 aaKnown RBP25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 WWC3Q9ULE0 1092 aa25.75■■□□□ 1.71
PDLIM2-216ENST00000464275 TNRC6CQ9HCJ0 1690 aaKnown RBP25.74■■□□□ 1.71
PDLIM2-216ENST00000464275 PANK2Q9BZ23 570 aa25.74■■□□□ 1.71
PDLIM2-216ENST00000464275 LRRC4BQ9NT99 713 aa25.74■■□□□ 1.71
PDLIM2-216ENST00000464275 MINPP1Q9UNW1 487 aa25.74■■□□□ 1.71
PDLIM2-216ENST00000464275 FGD1P98174 961 aa25.73■■□□□ 1.71
PDLIM2-216ENST00000464275 CELF1Q92879 486 aaKnown RBP25.73■■□□□ 1.71
PDLIM2-216ENST00000464275 AGXT2Q9BYV1 514 aa25.73■■□□□ 1.71
PDLIM2-216ENST00000464275 PHF14O94880 888 aa25.73■■□□□ 1.71
PDLIM2-216ENST00000464275 GTF3C6Q969F1 213 aa25.73■■□□□ 1.71
PDLIM2-216ENST00000464275 RPS8P62241 208 aaKnown RBP25.72■■□□□ 1.71
PDLIM2-216ENST00000464275 KRT27Q7Z3Y8 459 aa25.72■■□□□ 1.71
PDLIM2-216ENST00000464275 BRF1Q92994 677 aa25.72■■□□□ 1.71
PDLIM2-216ENST00000464275 GNL3LQ9NVN8 582 aaKnown RBP25.72■■□□□ 1.71
PDLIM2-216ENST00000464275 ZNF804BA4D1E1 1349 aa25.72■■□□□ 1.71
PDLIM2-216ENST00000464275 CARMIL3Q8ND23 1372 aa25.72■■□□□ 1.71
PDLIM2-216ENST00000464275 F13A1P00488 732 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 SLC27A3Q5K4L6 730 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 PDCP20941 246 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 ZNF445P59923 1031 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 STK3Q13188 491 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 CHAMP1Q96JM3 812 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 ATP6V1DQ9Y5K8 247 aa25.71■■□□□ 1.71
PDLIM2-216ENST00000464275 ZNF213O14771 459 aa25.7■■□□□ 1.7
PDLIM2-216ENST00000464275 MAGEB6Q8N7X4 407 aa25.7■■□□□ 1.7
PDLIM2-216ENST00000464275 LRRC2Q9BYS8 371 aa25.7■■□□□ 1.7
PDLIM2-216ENST00000464275 MTMR6Q9Y217 621 aa25.7■■□□□ 1.7
PDLIM2-216ENST00000464275 FBXL16Q8N461 479 aa25.69■■□□□ 1.7
PDLIM2-216ENST00000464275 AIDAQ96BJ3 306 aa25.69■■□□□ 1.7
PDLIM2-216ENST00000464275 STRBPQ96SI9 672 aaKnown RBP25.69■■□□□ 1.7
PDLIM2-216ENST00000464275 PFKFB2O60825 505 aa25.68■■□□□ 1.7
PDLIM2-216ENST00000464275 HAND2P61296 217 aa25.68■■□□□ 1.7
PDLIM2-216ENST00000464275 CAVIN4Q5BKX8 364 aa25.68■■□□□ 1.7
PDLIM2-216ENST00000464275 LARP1BQ659C4 914 aaKnown RBP25.68■■□□□ 1.7
PDLIM2-216ENST00000464275 ANKRD2Q9GZV1 360 aa25.68■■□□□ 1.7
PDLIM2-216ENST00000464275 NPHP1O15259 732 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 NFIXQ14938 502 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 ALX1Q15699 326 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 ZMYM6O95789 1325 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 CLCN1P35523 988 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 GAS2L3Q86XJ1 694 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 NCOA7Q8NI08 942 aa25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 RRAGDQ9NQL2 400 aaPredicted RBP25.67■■□□□ 1.7
PDLIM2-216ENST00000464275 MBD3O95983 291 aa25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 NCLP19338 710 aaKnown RBP25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 TM4SF1P30408 202 aa25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 GYG1P46976 350 aa25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 CCDC24Q8N4L8 307 aa25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 LLPHQ9BRT6 129 aaKnown RBP25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 CCDC88AQ3V6T2 1871 aa25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 WDR19Q8NEZ3 1342 aa25.66■■□□□ 1.7
PDLIM2-216ENST00000464275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 HMGB2P26583 209 aaKnown RBP25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 CHMP4CQ96CF2 233 aa25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 ZNF274Q96GC6 653 aaPredicted RBP25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 LRP2BPQ9P2M1 347 aa25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 APPP05067 770 aa25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 APOBRQ0VD83 1088 aa25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 CCDC173Q0VFZ6 552 aa25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 MB21D2Q8IYB1 491 aaPredicted RBP25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 GPT2Q8TD30 523 aa25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 ANP32BQ92688 251 aaKnown RBP25.65■■□□□ 1.7
PDLIM2-216ENST00000464275 VPS37CA5D8V6 355 aaPredicted RBP25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 PATL2C9JE40 543 aaKnown RBP25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 TRIM37O94972 964 aa25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 MCM5P33992 734 aa25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 SCRN1Q12765 414 aa25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 RALYLQ86SE5 291 aaKnown RBP25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 TMEM87AQ8NBN3 555 aa25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 DENND2AQ9ULE3 1009 aa25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 CACNA1SQ13698 1873 aa25.64■■□□□ 1.7
PDLIM2-216ENST00000464275 MBD4O95243 580 aa25.64■■□□□ 1.69
PDLIM2-216ENST00000464275 VPS37DQ86XT2 251 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms