RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TICAM2Q86XR7 235 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 SPATA5Q8NB90 893 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 LEMD3Q9Y2U8 911 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 CCDC171Q6TFL3 1326 aa17.36■□□□□ 0.37
COL5A1-205ENST00000464187 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
COL5A1-205ENST00000464187 GPSM2P81274 684 aa17.35■□□□□ 0.37
COL5A1-205ENST00000464187 R3HDM1Q15032 1099 aaKnown RBP17.35■□□□□ 0.37
COL5A1-205ENST00000464187 ZNF622Q969S3 477 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL5A1-205ENST00000464187 TTF1Q15361 905 aaPredicted RBP17.35■□□□□ 0.37
COL5A1-205ENST00000464187 MCTP1Q6DN14 999 aa17.35■□□□□ 0.37
COL5A1-205ENST00000464187 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
COL5A1-205ENST00000464187 KCNB2Q92953 911 aa17.35■□□□□ 0.37
COL5A1-205ENST00000464187 GNL3LQ9NVN8 582 aaKnown RBP17.35■□□□□ 0.37
COL5A1-205ENST00000464187 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
COL5A1-205ENST00000464187 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
COL5A1-205ENST00000464187 MED23Q9ULK4 1368 aa17.34■□□□□ 0.37
COL5A1-205ENST00000464187 CHRNA5P30532 468 aa17.34■□□□□ 0.37
COL5A1-205ENST00000464187 FBXO33Q7Z6M2 555 aa17.34■□□□□ 0.37
COL5A1-205ENST00000464187 TXNRD3Q86VQ6 643 aa17.34■□□□□ 0.37
COL5A1-205ENST00000464187 PODXL2Q9NZ53 605 aa17.34■□□□□ 0.37
COL5A1-205ENST00000464187 IRS2Q9Y4H2 1338 aa17.34■□□□□ 0.37
COL5A1-205ENST00000464187 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.37
COL5A1-205ENST00000464187 LRRFIP1Q32MZ4 808 aaKnown RBP17.33■□□□□ 0.37
COL5A1-205ENST00000464187 STYK1Q6J9G0 422 aa17.33■□□□□ 0.37
COL5A1-205ENST00000464187 GGA1Q9UJY5 639 aa17.33■□□□□ 0.37
COL5A1-205ENST00000464187 UFL1O94874 794 aa17.33■□□□□ 0.36
COL5A1-205ENST00000464187 ATP2B4P23634 1241 aa17.33■□□□□ 0.36
COL5A1-205ENST00000464187 AK2P54819 239 aa17.33■□□□□ 0.36
COL5A1-205ENST00000464187 SLFNL1Q499Z3 407 aa17.33■□□□□ 0.36
COL5A1-205ENST00000464187 PRPF40BQ6NWY9 871 aaKnown RBP17.33■□□□□ 0.36
COL5A1-205ENST00000464187 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.36
COL5A1-205ENST00000464187 MTFR1LQ9H019 292 aa17.33■□□□□ 0.36
COL5A1-205ENST00000464187 PIH1D3Q9NQM4 214 aaKnown RBP17.33■□□□□ 0.36
COL5A1-205ENST00000464187 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
COL5A1-205ENST00000464187 AKAP11Q9UKA4 1901 aa17.32■□□□□ 0.36
COL5A1-205ENST00000464187 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
COL5A1-205ENST00000464187 C10orf71Q711Q0 1435 aa17.32■□□□□ 0.36
COL5A1-205ENST00000464187 RNF113AO15541 343 aaKnown RBP17.32■□□□□ 0.36
COL5A1-205ENST00000464187 BRD1O95696 1058 aa17.32■□□□□ 0.36
COL5A1-205ENST00000464187 NECTIN1Q15223 517 aa17.32■□□□□ 0.36
COL5A1-205ENST00000464187 ZNF589Q86UQ0 364 aaPredicted RBP17.32■□□□□ 0.36
COL5A1-205ENST00000464187 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
COL5A1-205ENST00000464187 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 ZFYP08048 801 aaPredicted RBP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 KLHL40Q2TBA0 621 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 MCMDC2Q4G0Z9 681 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 RUFY3Q7L099 469 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 LMBRD1Q9NUN5 540 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 POLLQ9UGP5 575 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 TCHHQ07283 1943 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 XRCC6P12956 609 aaKnown RBP eCLIP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 ADCK5Q3MIX3 580 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 ZMYM1Q5SVZ6 1142 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 CNKSR1Q969H4 720 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 TMX4Q9H1E5 349 aaPredicted RBP17.31■□□□□ 0.36
COL5A1-205ENST00000464187 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 DENND2AQ9ULE3 1009 aa17.31■□□□□ 0.36
COL5A1-205ENST00000464187 SEMA3EO15041 775 aa17.3■□□□□ 0.36
COL5A1-205ENST00000464187 CPA1P15085 419 aa17.3■□□□□ 0.36
COL5A1-205ENST00000464187 POLD1P28340 1107 aa17.3■□□□□ 0.36
COL5A1-205ENST00000464187 SLC9C2Q5TAH2 1124 aa17.3■□□□□ 0.36
COL5A1-205ENST00000464187 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
COL5A1-205ENST00000464187 JAKMIP1Q96N16 626 aaKnown RBP17.3■□□□□ 0.36
COL5A1-205ENST00000464187 TM6SF1Q9BZW5 370 aa17.3■□□□□ 0.36
COL5A1-205ENST00000464187 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
COL5A1-205ENST00000464187 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-205ENST00000464187 C6orf229H3BNL8 230 aa17.29■□□□□ 0.36
COL5A1-205ENST00000464187 FOXD4L5Q5VV16 416 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-205ENST00000464187 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
COL5A1-205ENST00000464187 FOXD4L4Q8WXT5 416 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-205ENST00000464187 ZSWIM6Q9HCJ5 1215 aa17.29■□□□□ 0.36
COL5A1-205ENST00000464187 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-205ENST00000464187 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
COL5A1-205ENST00000464187 ADD2P35612 726 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 CCDC129Q6ZRS4 1044 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 MPNDQ8N594 471 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 CHAMP1Q96JM3 812 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
COL5A1-205ENST00000464187 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 LRRC37AA6NMS7 1700 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 SLC27A2O14975 620 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 DPP8Q6V1X1 898 aaPredicted RBP17.28■□□□□ 0.36
COL5A1-205ENST00000464187 APPBP2Q92624 585 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
COL5A1-205ENST00000464187 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 MAST3O60307 1309 aa17.27■□□□□ 0.36
COL5A1-205ENST00000464187 ZBTB22O15209 634 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms