RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 RASSF4Q9H2L5 321 aa7.22□□□□□ -1.25
USP9X-204ENST00000463829 NAGPAQ9UK23 515 aa7.22□□□□□ -1.25
USP9X-204ENST00000463829 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP9X-204ENST00000463829 RBM25P49756 843 aaKnown RBP7.21□□□□□ -1.26
USP9X-204ENST00000463829 PSMD2Q13200 908 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 SHISA2Q6UWI4 295 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 TMC4Q7Z404 712 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 TTC9Q92623 222 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 LPIN3Q9BQK8 851 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 SRCIN1Q9C0H9 1055 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 SMG9Q9H0W8 520 aaKnown RBP7.21□□□□□ -1.26
USP9X-204ENST00000463829 LIN7BQ9HAP6 207 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 TRAK1Q9UPV9 953 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 AK5Q9Y6K8 562 aa7.21□□□□□ -1.26
USP9X-204ENST00000463829 NFKBIEO00221 500 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 PDE2AO00408 941 aaPredicted RBP7.2□□□□□ -1.26
USP9X-204ENST00000463829 TRPA1O75762 1119 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 ACPPP15309 386 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 ATP11AP98196 1134 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 GRM2Q14416 872 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 CEP135Q66GS9 1140 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 WFDC8Q8IUA0 241 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 TMEM102Q8N9M5 508 aaPredicted RBP7.2□□□□□ -1.26
USP9X-204ENST00000463829 ZNF428Q96B54 188 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 BCO2Q9BYV7 579 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 MRS2Q9HD23 443 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 RNF19AQ9NV58 838 aa7.2□□□□□ -1.26
USP9X-204ENST00000463829 SORBS3O60504 671 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 EIF4BP23588 611 aaKnown RBP7.19□□□□□ -1.26
USP9X-204ENST00000463829 NXPE4Q6UWF7 544 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 CCNJLQ8IV13 435 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 NXPE3Q969Y0 559 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 FAM161BQ96MY7 647 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 POP1Q99575 1024 aaKnown RBP7.19□□□□□ -1.26
USP9X-204ENST00000463829 OSBPL7Q9BZF2 842 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 C12orf49Q9H741 205 aa7.19□□□□□ -1.26
USP9X-204ENST00000463829 UNCXA6NJT0 531 aa7.18□□□□□ -1.26
USP9X-204ENST00000463829 FOXD4L6Q3SYB3 417 aaPredicted RBP7.18□□□□□ -1.26
USP9X-204ENST00000463829 FOXD4L3Q6VB84 417 aaPredicted RBP7.18□□□□□ -1.26
USP9X-204ENST00000463829 FBXO11Q86XK2 927 aa7.18□□□□□ -1.26
USP9X-204ENST00000463829 CACTIN-AS1Q8N1I8 211 aa7.18□□□□□ -1.26
USP9X-204ENST00000463829 MRRFQ96E11 262 aaKnown RBP7.18□□□□□ -1.26
USP9X-204ENST00000463829 TCF12Q99081 682 aa7.18□□□□□ -1.26
USP9X-204ENST00000463829 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
USP9X-204ENST00000463829 BHLHE41Q9C0J9 482 aaPredicted RBP7.18□□□□□ -1.26
USP9X-204ENST00000463829 PTPRAP18433 802 aa7.17□□□□□ -1.26
USP9X-204ENST00000463829 PRPF40BQ6NWY9 871 aaKnown RBP7.17□□□□□ -1.26
USP9X-204ENST00000463829 IGF2-ASQ6U949 168 aa7.17□□□□□ -1.26
USP9X-204ENST00000463829 GLIS3Q8NEA6 775 aa7.17□□□□□ -1.26
USP9X-204ENST00000463829 WFDC12Q8WWY7 111 aa7.17□□□□□ -1.26
USP9X-204ENST00000463829 HHIPQ96QV1 700 aa7.17□□□□□ -1.26
USP9X-204ENST00000463829 FAM8A1Q9UBU6 413 aa7.17□□□□□ -1.26
USP9X-204ENST00000463829 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 FAM177BA6PVY3 158 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 XRCC5P13010 732 aaKnown RBP7.16□□□□□ -1.26
USP9X-204ENST00000463829 VAMP1P23763 118 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 LRP8Q14114 963 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 MRPL58Q14197 206 aaKnown RBP7.16□□□□□ -1.26
USP9X-204ENST00000463829 GDF6Q6KF10 455 aaPredicted RBP7.16□□□□□ -1.26
USP9X-204ENST00000463829 ASAP3Q8TDY4 903 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 ZFYVE1Q9HBF4 777 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 VTI1BQ9UEU0 232 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 TRIM33Q9UPN9 1127 aa7.16□□□□□ -1.26
USP9X-204ENST00000463829 A0A096LPE4 126 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 A0A1W2PPZ6 126 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 E9PSI1 815 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 GSTT1P30711 240 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 GRIA4P48058 902 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 IREB2P48200 963 aaKnown RBP7.15□□□□□ -1.26
USP9X-204ENST00000463829 FCGRTP55899 365 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 PTPN12Q05209 780 aaKnown RBP7.15□□□□□ -1.26
USP9X-204ENST00000463829 GRIK5Q16478 980 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 DTHD1Q6ZMT9 781 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 NPM2Q86SE8 214 aaKnown RBP7.15□□□□□ -1.26
USP9X-204ENST00000463829 BSNDQ8WZ55 320 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 LACRTQ9GZZ8 138 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 ADAM19Q9H013 955 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 ABCB6Q9NP58 842 aa7.15□□□□□ -1.26
USP9X-204ENST00000463829 KIAA1522Q9P206 1035 aaPredicted RBP7.15□□□□□ -1.26
USP9X-204ENST00000463829 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
USP9X-204ENST00000463829 CDC27P30260 824 aa7.14□□□□□ -1.27
USP9X-204ENST00000463829 ILDR2Q71H61 639 aa7.14□□□□□ -1.27
USP9X-204ENST00000463829 IL22RA1Q8N6P7 574 aa7.14□□□□□ -1.27
USP9X-204ENST00000463829 DCAF11Q8TEB1 546 aa7.14□□□□□ -1.27
USP9X-204ENST00000463829 SSBP4Q9BWG4 385 aaPredicted RBP7.14□□□□□ -1.27
USP9X-204ENST00000463829 USP17L7P0C7H9 530 aa7.13□□□□□ -1.27
USP9X-204ENST00000463829 ITPKAP23677 461 aa7.13□□□□□ -1.27
USP9X-204ENST00000463829 CABP4P57796 275 aa7.13□□□□□ -1.27
USP9X-204ENST00000463829 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
USP9X-204ENST00000463829 MUC3BQ9H195 1237 aa7.13□□□□□ -1.27
USP9X-204ENST00000463829 ADAMTSL4Q6UY14 1074 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 C3orf58Q8NDZ4 430 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 CRELD1Q96HD1 420 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 BACH2Q9BYV9 841 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
USP9X-204ENST00000463829 SOX13Q9UN79 622 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 PPME1Q9Y570 386 aa7.12□□□□□ -1.27
USP9X-204ENST00000463829 HYAL3O43820 417 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms