RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZC3H15Q8WU90 426 aaKnown RBP21.93■■□□□ 1.1
VPS52-214ENST00000463486 MYO3BQ8WXR4 1341 aa21.93■■□□□ 1.1
VPS52-214ENST00000463486 PASKQ96RG2 1323 aa21.93■■□□□ 1.1
VPS52-214ENST00000463486 JAG2Q9Y219 1238 aa21.93■■□□□ 1.1
VPS52-214ENST00000463486 CLEC11AQ9Y240 323 aa21.93■■□□□ 1.1
VPS52-214ENST00000463486 ZBTB22O15209 634 aa21.92■■□□□ 1.1
VPS52-214ENST00000463486 SURF6O75683 361 aaKnown RBP21.92■■□□□ 1.1
VPS52-214ENST00000463486 FBXW7Q969H0 707 aa21.92■■□□□ 1.1
VPS52-214ENST00000463486 IQSEC3Q9UPP2 1182 aaPredicted RBP21.92■■□□□ 1.1
VPS52-214ENST00000463486 A0A1B0GUL7 405 aa21.91■■□□□ 1.1
VPS52-214ENST00000463486 CNTROBQ8N137 903 aa21.91■■□□□ 1.1
VPS52-214ENST00000463486 CHMP4BQ9H444 224 aaKnown RBP21.91■■□□□ 1.1
VPS52-214ENST00000463486 GRIK5Q16478 980 aa21.9■■□□□ 1.1
VPS52-214ENST00000463486 RBM26Q5T8P6 1007 aaKnown RBP21.9■■□□□ 1.1
VPS52-214ENST00000463486 KIAA0825Q8IV33 1275 aa21.9■■□□□ 1.1
VPS52-214ENST00000463486 ZBED3Q96IU2 234 aaPredicted RBP21.9■■□□□ 1.1
VPS52-214ENST00000463486 MYOZ2Q9NPC6 264 aa21.9■■□□□ 1.1
VPS52-214ENST00000463486 COL1A1P02452 1464 aaPredicted RBP21.9■■□□□ 1.1
VPS52-214ENST00000463486 ARAP2Q8WZ64 1704 aa21.89■■□□□ 1.1
VPS52-214ENST00000463486 ASTN2O75129 1339 aaPredicted RBP21.89■■□□□ 1.1
VPS52-214ENST00000463486 PHKA1P46020 1223 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 MMP14P50281 582 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 KIF4BQ2VIQ3 1234 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 VPS37DQ86XT2 251 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 XAGE2Q96GT9 111 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 GPR108Q9NPR9 543 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 AKAP2Q9Y2D5 859 aa21.89■■□□□ 1.09
VPS52-214ENST00000463486 CCDC102BQ68D86 513 aa21.88■■□□□ 1.09
VPS52-214ENST00000463486 APLP1P51693 650 aa21.87■■□□□ 1.09
VPS52-214ENST00000463486 FMR1Q06787 632 aaKnown RBP eCLIP21.87■■□□□ 1.09
VPS52-214ENST00000463486 MFSD14BQ5SR56 506 aa21.87■■□□□ 1.09
VPS52-214ENST00000463486 EXOC6BQ9Y2D4 811 aa21.87■■□□□ 1.09
VPS52-214ENST00000463486 SCARF1Q14162 830 aa21.86■■□□□ 1.09
VPS52-214ENST00000463486 NBPF9Q3BBW0 867 aa21.86■■□□□ 1.09
VPS52-214ENST00000463486 OGFOD1Q8N543 542 aa21.86■■□□□ 1.09
VPS52-214ENST00000463486 TRAF5O00463 557 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 WNT10BO00744 389 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 CHAF1AQ13111 956 aaPredicted RBP21.85■■□□□ 1.09
VPS52-214ENST00000463486 TNNI3KQ59H18 835 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 DLK2Q6UY11 383 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 MTMR14Q8NCE2 650 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 CRBNQ96SW2 442 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 GLIS2Q9BZE0 524 aaPredicted RBP21.85■■□□□ 1.09
VPS52-214ENST00000463486 PCDHAC2Q9Y5I4 1007 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 FPGT-TNNI3KV9GXZ4 949 aa21.85■■□□□ 1.09
VPS52-214ENST00000463486 HTRA3P83110 453 aa21.84■■□□□ 1.09
VPS52-214ENST00000463486 EAF2Q96CJ1 260 aaPredicted RBP21.84■■□□□ 1.09
VPS52-214ENST00000463486 NEUROD6Q96NK8 337 aa21.84■■□□□ 1.09
VPS52-214ENST00000463486 PCDHB15Q9Y5E8 787 aa21.84■■□□□ 1.09
VPS52-214ENST00000463486 F8W031 263 aaPredicted RBP21.83■■□□□ 1.09
VPS52-214ENST00000463486 SEMA3EO15041 775 aa21.83■■□□□ 1.09
VPS52-214ENST00000463486 OS9Q13438 667 aaPredicted RBP21.83■■□□□ 1.09
VPS52-214ENST00000463486 TBC1D22AQ8WUA7 517 aa21.83■■□□□ 1.09
VPS52-214ENST00000463486 POLR2AP24928 1970 aaKnown RBP21.83■■□□□ 1.08
VPS52-214ENST00000463486 AOX1Q06278 1338 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 HMMRO75330 724 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 FRAT2O75474 233 aaPredicted RBP21.82■■□□□ 1.08
VPS52-214ENST00000463486 RASGRF1Q13972 1273 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 ANGEL2Q5VTE6 544 aaKnown RBP21.82■■□□□ 1.08
VPS52-214ENST00000463486 CST9Q5W186 159 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 CDC37L1Q7L3B6 337 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 USP48Q86UV5 1035 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 DNAJC5GQ8N7S2 189 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 DBNDD2Q9BQY9 259 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
VPS52-214ENST00000463486 GGA3Q9NZ52 723 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 HDAC9Q9UKV0 1011 aa21.82■■□□□ 1.08
VPS52-214ENST00000463486 WDR66Q8TBY9 1149 aa21.81■■□□□ 1.08
VPS52-214ENST00000463486 RHPN1Q8TCX5 695 aa21.81■■□□□ 1.08
VPS52-214ENST00000463486 PRMT6Q96LA8 375 aaPredicted RBP21.81■■□□□ 1.08
VPS52-214ENST00000463486 DBNLQ9UJU6 430 aaKnown RBP21.81■■□□□ 1.08
VPS52-214ENST00000463486 TTF2Q9UNY4 1162 aaKnown RBP21.81■■□□□ 1.08
VPS52-214ENST00000463486 PDS5AQ29RF7 1337 aaKnown RBP21.8■■□□□ 1.08
VPS52-214ENST00000463486 SALL1Q9NSC2 1324 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 ARID4AP29374 1257 aaPredicted RBP21.8■■□□□ 1.08
VPS52-214ENST00000463486 CFAP100Q494V2 611 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 ERC1Q8IUD2 1116 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 MRIQ9BWK5 157 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 TLR7Q9NYK1 1049 aaKnown RBP21.8■■□□□ 1.08
VPS52-214ENST00000463486 SERPINA10Q9UK55 444 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 DENND2AQ9ULE3 1009 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 SUGT1Q9Y2Z0 365 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 SUPT16HQ9Y5B9 1047 aaKnown RBP21.8■■□□□ 1.08
VPS52-214ENST00000463486 PITPNM2Q9BZ72 1349 aa21.8■■□□□ 1.08
VPS52-214ENST00000463486 SPDYE2BA6NHP3 402 aa21.79■■□□□ 1.08
VPS52-214ENST00000463486 ADM5C9JUS6 153 aa21.79■■□□□ 1.08
VPS52-214ENST00000463486 SPDYE6P0CI01 402 aa21.79■■□□□ 1.08
VPS52-214ENST00000463486 HSP90AB4PQ58FF6 505 aa21.79■■□□□ 1.08
VPS52-214ENST00000463486 KRT26Q7Z3Y9 468 aa21.79■■□□□ 1.08
VPS52-214ENST00000463486 DCPSQ96C86 337 aaKnown RBP21.79■■□□□ 1.08
VPS52-214ENST00000463486 HMG20BQ9P0W2 317 aa21.79■■□□□ 1.08
VPS52-214ENST00000463486 HDLBPQ00341 1268 aaKnown RBP21.78■■□□□ 1.08
VPS52-214ENST00000463486 DLGAP5Q15398 846 aa21.78■■□□□ 1.08
VPS52-214ENST00000463486 PI16Q6UXB8 463 aa21.78■■□□□ 1.08
VPS52-214ENST00000463486 CCDC8Q9H0W5 538 aaPredicted RBP21.78■■□□□ 1.08
VPS52-214ENST00000463486 CREBZFQ9NS37 354 aa21.78■■□□□ 1.08
VPS52-214ENST00000463486 MYH13Q9UKX3 1938 aa21.77■■□□□ 1.08
VPS52-214ENST00000463486 TMEM88BA6NKF7 163 aa21.77■■□□□ 1.08
VPS52-214ENST00000463486 RAB11FIP3O75154 756 aa21.77■■□□□ 1.08
VPS52-214ENST00000463486 MCAMP43121 646 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms