RNA–Protein interactions for RNA: ENST00000463209.1

TMEM254-208, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 407 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-208ENST00000463209 NBPF9Q3BBW0 867 aa10.76□□□□□ -0.69
TMEM254-208ENST00000463209 ANGEL2Q5VTE6 544 aaKnown RBP10.76□□□□□ -0.69
TMEM254-208ENST00000463209 CST9Q5W186 159 aa10.76□□□□□ -0.69
TMEM254-208ENST00000463209 C15orf52Q6ZUT6 534 aaKnown RBP10.76□□□□□ -0.69
TMEM254-208ENST00000463209 DZIP1LQ8IYY4 767 aaKnown RBP10.76□□□□□ -0.69
TMEM254-208ENST00000463209 FAM84BQ96KN1 310 aaPredicted RBP10.76□□□□□ -0.69
TMEM254-208ENST00000463209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.76□□□□□ -0.69
TMEM254-208ENST00000463209 AOX1Q06278 1338 aa10.76□□□□□ -0.69
TMEM254-208ENST00000463209 IL1R1P14778 569 aa10.75□□□□□ -0.69
TMEM254-208ENST00000463209 HIBADHP31937 336 aaKnown RBP10.75□□□□□ -0.69
TMEM254-208ENST00000463209 UBE4AQ14139 1066 aa10.75□□□□□ -0.69
TMEM254-208ENST00000463209 GRIK5Q16478 980 aa10.75□□□□□ -0.69
TMEM254-208ENST00000463209 PRAMEF18Q5VWM3 479 aa10.75□□□□□ -0.69
TMEM254-208ENST00000463209 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
TMEM254-208ENST00000463209 KRT26Q7Z3Y9 468 aa10.75□□□□□ -0.69
TMEM254-208ENST00000463209 PGAP2Q9UHJ9 254 aa10.75□□□□□ -0.69
TMEM254-208ENST00000463209 GNAI2P04899 355 aa10.74□□□□□ -0.69
TMEM254-208ENST00000463209 FGFR2P21802 821 aa10.74□□□□□ -0.69
TMEM254-208ENST00000463209 ADORA1P30542 326 aa10.74□□□□□ -0.69
TMEM254-208ENST00000463209 PUM3Q15397 648 aaKnown RBP10.74□□□□□ -0.69
TMEM254-208ENST00000463209 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
TMEM254-208ENST00000463209 VPS37DQ86XT2 251 aa10.74□□□□□ -0.69
TMEM254-208ENST00000463209 TDRD7Q8NHU6 1098 aaKnown RBP10.74□□□□□ -0.69
TMEM254-208ENST00000463209 DCPSQ96C86 337 aaKnown RBP10.74□□□□□ -0.69
TMEM254-208ENST00000463209 CNTNAP1P78357 1384 aa10.74□□□□□ -0.69
TMEM254-208ENST00000463209 ECM29Q5VYK3 1845 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 VEGFBP49765 207 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 TFCP2Q12800 502 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 MFSD14BQ5SR56 506 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 CYP4F22Q6NT55 531 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 ZC3H15Q8WU90 426 aaKnown RBP10.73□□□□□ -0.69
TMEM254-208ENST00000463209 CDCA5Q96FF9 252 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 RCAN3Q9UKA8 241 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 MYO3BQ8WXR4 1341 aa10.73□□□□□ -0.69
TMEM254-208ENST00000463209 CLRN2A0PK11 232 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 WNT10BO00744 389 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 FRAT2O75474 233 aaPredicted RBP10.72□□□□□ -0.69
TMEM254-208ENST00000463209 CIAO1O76071 339 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 SLC5A1P13866 664 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 CAVIN4Q5BKX8 364 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 MOB2Q70IA6 237 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 FBXO33Q7Z6M2 555 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 SULF1Q8IWU6 871 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 OGFOD1Q8N543 542 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 COPRSQ9NQ92 184 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 COG6Q9Y2V7 657 aa10.72□□□□□ -0.69
TMEM254-208ENST00000463209 ZBTB7BO15156 539 aaPredicted RBP10.71□□□□□ -0.69
TMEM254-208ENST00000463209 AOC2O75106 756 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 IFIT1P09914 478 aaKnown RBP10.71□□□□□ -0.69
TMEM254-208ENST00000463209 IL15P40933 162 aaPredicted RBP10.71□□□□□ -0.69
TMEM254-208ENST00000463209 PHKA1P46020 1223 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 RBM5P52756 815 aaKnown RBP eCLIP10.71□□□□□ -0.69
TMEM254-208ENST00000463209 MTX1Q13505 466 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 CFAP100Q494V2 611 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 FAM205AQ6ZU69 1335 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 JMYQ8N9B5 988 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 LPIN2Q92539 896 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 CEP126Q9P2H0 1117 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 TTF2Q9UNY4 1162 aaKnown RBP10.71□□□□□ -0.69
TMEM254-208ENST00000463209 FZD1Q9UP38 647 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 TLL2Q9Y6L7 1015 aa10.71□□□□□ -0.69
TMEM254-208ENST00000463209 THSD7BQ9C0I4 1608 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 TIMM10P62072 90 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 PRKG1Q13976 671 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 DLGAP5Q15398 846 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 ZBED3Q96IU2 234 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-208ENST00000463209 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
TMEM254-208ENST00000463209 HDAC9Q9UKV0 1011 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
TMEM254-208ENST00000463209 WDR33Q9C0J8 1336 aaKnown RBP10.69□□□□□ -0.7
TMEM254-208ENST00000463209 A0A1B0GUL7 405 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 HSPA1AP0DMV8 641 aaKnown RBP10.69□□□□□ -0.7
TMEM254-208ENST00000463209 HSPA1BP0DMV9 641 aaKnown RBP10.69□□□□□ -0.7
TMEM254-208ENST00000463209 CACNB3P54284 484 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 POLA2Q14181 598 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 CAPNS2Q96L46 248 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 PRMT6Q96LA8 375 aaPredicted RBP10.69□□□□□ -0.7
TMEM254-208ENST00000463209 BCL11AQ9H165 835 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 VEZTQ9HBM0 779 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 GBA2Q9HCG7 927 aaPredicted RBP10.69□□□□□ -0.7
TMEM254-208ENST00000463209 SSC5DA1L4H1 1573 aa10.69□□□□□ -0.7
TMEM254-208ENST00000463209 SPDYE2BA6NHP3 402 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 SPDYE6P0CI01 402 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 CRKP46108 304 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 HUNKP57058 714 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 ATP8B2P98198 1209 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 OS9Q13438 667 aaPredicted RBP10.68□□□□□ -0.7
TMEM254-208ENST00000463209 MVPQ14764 893 aaKnown RBP10.68□□□□□ -0.7
TMEM254-208ENST00000463209 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 PI16Q6UXB8 463 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 NEUROD6Q96NK8 337 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 ZIC5Q96T25 663 aa10.68□□□□□ -0.7
TMEM254-208ENST00000463209 TDRD3Q9H7E2 651 aaKnown RBP10.68□□□□□ -0.7
TMEM254-208ENST00000463209 PAPPA2Q9BXP8 1791 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms