RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 JUNBP17275 347 aaPredicted RBP7.9□□□□□ -1.14
USH2A-203ENST00000463147 CES1P23141 567 aa7.9□□□□□ -1.14
USH2A-203ENST00000463147 MSMPQ1L6U9 139 aa7.9□□□□□ -1.14
USH2A-203ENST00000463147 FAM26DQ5JW98 314 aa7.9□□□□□ -1.14
USH2A-203ENST00000463147 ADAMTSL4Q6UY14 1074 aa7.9□□□□□ -1.14
USH2A-203ENST00000463147 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
USH2A-203ENST00000463147 SMG8Q8ND04 991 aaKnown RBP7.9□□□□□ -1.14
USH2A-203ENST00000463147 SLC7A3Q8WY07 619 aa7.9□□□□□ -1.14
USH2A-203ENST00000463147 CCDC39Q9UFE4 941 aa7.9□□□□□ -1.14
USH2A-203ENST00000463147 HOXA10P31260 410 aaPredicted RBP7.89□□□□□ -1.15
USH2A-203ENST00000463147 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
USH2A-203ENST00000463147 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
USH2A-203ENST00000463147 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
USH2A-203ENST00000463147 MKNK1Q9BUB5 465 aa7.89□□□□□ -1.15
USH2A-203ENST00000463147 DZANK1Q9NVP4 752 aa7.89□□□□□ -1.15
USH2A-203ENST00000463147 FAM95CA0A1B0GW59 222 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 F13BP05160 661 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 CBLL1Q75N03 491 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 TP53INP2Q8IXH6 220 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 POU5F2Q8N7G0 328 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 TMEM102Q8N9M5 508 aaPredicted RBP7.88□□□□□ -1.15
USH2A-203ENST00000463147 NUDT16Q96DE0 195 aaKnown RBP7.88□□□□□ -1.15
USH2A-203ENST00000463147 TMPRSS13Q9BYE2 586 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 SOX17Q9H6I2 414 aaPredicted RBP7.88□□□□□ -1.15
USH2A-203ENST00000463147 BSDC1Q9NW68 430 aaPredicted RBP7.88□□□□□ -1.15
USH2A-203ENST00000463147 TMEM63CQ9P1W3 806 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 ZMIZ1Q9ULJ6 1067 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 SOX13Q9UN79 622 aa7.88□□□□□ -1.15
USH2A-203ENST00000463147 NFKBIEO00221 500 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 USP11P51784 963 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 IKBKEQ14164 716 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 SGO2Q562F6 1265 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 FBXL6Q8N531 539 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 BSNDQ8WZ55 320 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 KANSL3Q9P2N6 904 aa7.87□□□□□ -1.15
USH2A-203ENST00000463147 CYP26A1O43174 497 aa7.86□□□□□ -1.15
USH2A-203ENST00000463147 TIAF1O95411 115 aa7.86□□□□□ -1.15
USH2A-203ENST00000463147 NFKBIBQ15653 356 aa7.86□□□□□ -1.15
USH2A-203ENST00000463147 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
USH2A-203ENST00000463147 OGFOD2Q6N063 350 aa7.86□□□□□ -1.15
USH2A-203ENST00000463147 ZBTB39O15060 712 aa7.85□□□□□ -1.15
USH2A-203ENST00000463147 JAG1P78504 1218 aa7.85□□□□□ -1.15
USH2A-203ENST00000463147 CLP1Q92989 425 aaKnown RBP7.85□□□□□ -1.15
USH2A-203ENST00000463147 CNTN3Q9P232 1028 aa7.85□□□□□ -1.15
USH2A-203ENST00000463147 ATG7O95352 703 aa7.84□□□□□ -1.15
USH2A-203ENST00000463147 CYP27A1Q02318 531 aa7.84□□□□□ -1.15
USH2A-203ENST00000463147 HP1BP3Q5SSJ5 553 aaPredicted RBP7.84□□□□□ -1.15
USH2A-203ENST00000463147 ITGB5P18084 799 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 DUSP27Q5VZP5 1158 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 CAPN12Q6ZSI9 719 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 C1orf127Q8N9H9 656 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 STK32AQ8WU08 396 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 NXPE3Q969Y0 559 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 USP26Q9BXU7 913 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 ZFYVE1Q9HBF4 777 aa7.83□□□□□ -1.16
USH2A-203ENST00000463147 LOC100289279A0A1B0GTE1 492 aa7.82□□□□□ -1.16
USH2A-203ENST00000463147 SOX1O00570 391 aaPredicted RBP7.82□□□□□ -1.16
USH2A-203ENST00000463147 EDN3P14138 238 aa7.82□□□□□ -1.16
USH2A-203ENST00000463147 ZAR1Q86SH2 424 aa7.82□□□□□ -1.16
USH2A-203ENST00000463147 EZH1Q92800 747 aaPredicted RBP7.82□□□□□ -1.16
USH2A-203ENST00000463147 TBC1D32Q96NH3 1257 aa7.82□□□□□ -1.16
USH2A-203ENST00000463147 ZNF777Q9ULD5 760 aaPredicted RBP7.82□□□□□ -1.16
USH2A-203ENST00000463147 C8AP07357 584 aa7.81□□□□□ -1.16
USH2A-203ENST00000463147 MAP7Q14244 749 aa7.81□□□□□ -1.16
USH2A-203ENST00000463147 EDEM1Q92611 657 aa7.81□□□□□ -1.16
USH2A-203ENST00000463147 OSMRQ99650 979 aa7.81□□□□□ -1.16
USH2A-203ENST00000463147 BIN1O00499 593 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 MZF1P28698 734 aaPredicted RBP7.8□□□□□ -1.16
USH2A-203ENST00000463147 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
USH2A-203ENST00000463147 NOM1Q5C9Z4 860 aaKnown RBP7.8□□□□□ -1.16
USH2A-203ENST00000463147 ALKBH2Q6NS38 261 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 VN1R5Q7Z5H4 357 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 FLCNQ8NFG4 579 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 FBLIM1Q8WUP2 373 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 C1orf115Q9H7X2 142 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
USH2A-203ENST00000463147 DNM1Q05193 864 aaKnown RBP7.79□□□□□ -1.16
USH2A-203ENST00000463147 EHHADHQ08426 723 aa7.79□□□□□ -1.16
USH2A-203ENST00000463147 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
USH2A-203ENST00000463147 TMEM164Q5U3C3 297 aa7.79□□□□□ -1.16
USH2A-203ENST00000463147 PDGFAP04085 211 aa7.78□□□□□ -1.16
USH2A-203ENST00000463147 ACPPP15309 386 aa7.78□□□□□ -1.16
USH2A-203ENST00000463147 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
USH2A-203ENST00000463147 STK11IPQ8N1F8 1099 aa7.78□□□□□ -1.16
USH2A-203ENST00000463147 C2CD4AQ8NCU7 369 aaPredicted RBP7.78□□□□□ -1.16
USH2A-203ENST00000463147 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
USH2A-203ENST00000463147 ZKSCAN3Q9BRR0 538 aa7.78□□□□□ -1.16
USH2A-203ENST00000463147 BHLHE41Q9C0J9 482 aaPredicted RBP7.78□□□□□ -1.16
USH2A-203ENST00000463147 ESRRAP11474 423 aaPredicted RBP7.77□□□□□ -1.17
USH2A-203ENST00000463147 ATCAYQ86WG3 371 aa7.77□□□□□ -1.17
USH2A-203ENST00000463147 CHRDQ9H2X0 955 aa7.77□□□□□ -1.17
USH2A-203ENST00000463147 PHACTR2O75167 634 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 TRPA1O75762 1119 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 DRD2P14416 443 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 ATP2B4P23634 1241 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 USP5P45974 858 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 SRPK2P78362 688 aaKnown RBP7.76□□□□□ -1.17
USH2A-203ENST00000463147 GSTM4Q03013 218 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 HGSNATQ68CP4 663 aa7.76□□□□□ -1.17
USH2A-203ENST00000463147 ASAP3Q8TDY4 903 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms