RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ASTN2O75129 1339 aaPredicted RBP23.41■■□□□ 1.34
COL9A3-203ENST00000462700 KLRG1Q96E93 195 aa23.41■■□□□ 1.34
COL9A3-203ENST00000462700 GGA3Q9NZ52 723 aa23.41■■□□□ 1.34
COL9A3-203ENST00000462700 HDAC9Q9UKV0 1011 aa23.41■■□□□ 1.34
COL9A3-203ENST00000462700 BCAMP50895 628 aa23.4■■□□□ 1.34
COL9A3-203ENST00000462700 SCARF1Q14162 830 aa23.4■■□□□ 1.34
COL9A3-203ENST00000462700 ATP2B3Q16720 1220 aa23.4■■□□□ 1.34
COL9A3-203ENST00000462700 DCPSQ96C86 337 aaKnown RBP23.4■■□□□ 1.34
COL9A3-203ENST00000462700 YTHDC1Q96MU7 727 aaKnown RBP23.4■■□□□ 1.34
COL9A3-203ENST00000462700 KRT26Q7Z3Y9 468 aa23.39■■□□□ 1.33
COL9A3-203ENST00000462700 USP48Q86UV5 1035 aa23.39■■□□□ 1.33
COL9A3-203ENST00000462700 IQSEC3Q9UPP2 1182 aaPredicted RBP23.39■■□□□ 1.33
COL9A3-203ENST00000462700 ATP8B2P98198 1209 aa23.38■■□□□ 1.33
COL9A3-203ENST00000462700 POLA2Q14181 598 aa23.38■■□□□ 1.33
COL9A3-203ENST00000462700 MVPQ14764 893 aaKnown RBP23.38■■□□□ 1.33
COL9A3-203ENST00000462700 ANGEL2Q5VTE6 544 aaKnown RBP23.38■■□□□ 1.33
COL9A3-203ENST00000462700 NBPF9Q3BBW0 867 aa23.37■■□□□ 1.33
COL9A3-203ENST00000462700 MFSD14BQ5SR56 506 aa23.37■■□□□ 1.33
COL9A3-203ENST00000462700 CST9Q5W186 159 aa23.37■■□□□ 1.33
COL9A3-203ENST00000462700 SSH3Q8TE77 659 aa23.37■■□□□ 1.33
COL9A3-203ENST00000462700 ADM5C9JUS6 153 aa23.36■■□□□ 1.33
COL9A3-203ENST00000462700 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
COL9A3-203ENST00000462700 WNT10BO00744 389 aa23.36■■□□□ 1.33
COL9A3-203ENST00000462700 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
COL9A3-203ENST00000462700 TFCP2Q12800 502 aa23.36■■□□□ 1.33
COL9A3-203ENST00000462700 COG6Q9Y2V7 657 aa23.36■■□□□ 1.33
COL9A3-203ENST00000462700 PITPNM2Q9BZ72 1349 aa23.35■■□□□ 1.33
COL9A3-203ENST00000462700 CELF2O95319 508 aaKnown RBP23.35■■□□□ 1.33
COL9A3-203ENST00000462700 CHAF1AQ13111 956 aaPredicted RBP23.35■■□□□ 1.33
COL9A3-203ENST00000462700 DLK2Q6UY11 383 aa23.35■■□□□ 1.33
COL9A3-203ENST00000462700 SULF1Q8IWU6 871 aa23.35■■□□□ 1.33
COL9A3-203ENST00000462700 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.35■■□□□ 1.33
COL9A3-203ENST00000462700 ZBED3Q96IU2 234 aaPredicted RBP23.35■■□□□ 1.33
COL9A3-203ENST00000462700 MKRN1Q9UHC7 482 aaKnown RBP23.35■■□□□ 1.33
COL9A3-203ENST00000462700 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
COL9A3-203ENST00000462700 G3BP1Q13283 466 aaKnown RBP eCLIP23.34■■□□□ 1.33
COL9A3-203ENST00000462700 DDX19BQ9UMR2 479 aa23.34■■□□□ 1.33
COL9A3-203ENST00000462700 ARAP2Q8WZ64 1704 aa23.33■■□□□ 1.33
COL9A3-203ENST00000462700 CEP85Q6P2H3 762 aa23.33■■□□□ 1.33
COL9A3-203ENST00000462700 MTMR14Q8NCE2 650 aa23.33■■□□□ 1.33
COL9A3-203ENST00000462700 TBC1D22AQ8WUA7 517 aa23.33■■□□□ 1.33
COL9A3-203ENST00000462700 ZNF408Q9H9D4 720 aa23.33■■□□□ 1.33
COL9A3-203ENST00000462700 ABT1Q9ULW3 272 aaKnown RBP23.33■■□□□ 1.33
COL9A3-203ENST00000462700 AKAP2Q9Y2D5 859 aa23.33■■□□□ 1.33
COL9A3-203ENST00000462700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.33■■□□□ 1.33
COL9A3-203ENST00000462700 A0A1B0GUL7 405 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 RASSF10A6NK89 507 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 ADORA1P30542 326 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 TIMM10P62072 90 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 PDE3AQ14432 1141 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 DLGAP5Q15398 846 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 C20orf194Q5TEA3 1177 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 JMYQ8N9B5 988 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 TRPM7Q96QT4 1865 aa23.32■■□□□ 1.32
COL9A3-203ENST00000462700 COL1A1P02452 1464 aaPredicted RBP23.31■■□□□ 1.32
COL9A3-203ENST00000462700 CFAP100Q494V2 611 aa23.31■■□□□ 1.32
COL9A3-203ENST00000462700 TTF2Q9UNY4 1162 aaKnown RBP23.31■■□□□ 1.32
COL9A3-203ENST00000462700 PCDHAC2Q9Y5I4 1007 aa23.31■■□□□ 1.32
COL9A3-203ENST00000462700 TLL2Q9Y6L7 1015 aa23.31■■□□□ 1.32
COL9A3-203ENST00000462700 PHKA1P46020 1223 aa23.3■■□□□ 1.32
COL9A3-203ENST00000462700 GRIK5Q16478 980 aa23.3■■□□□ 1.32
COL9A3-203ENST00000462700 ZBTB40Q9NUA8 1239 aa23.3■■□□□ 1.32
COL9A3-203ENST00000462700 GNL3LQ9NVN8 582 aaKnown RBP23.3■■□□□ 1.32
COL9A3-203ENST00000462700 SCAF8Q9UPN6 1271 aaKnown RBP23.3■■□□□ 1.32
COL9A3-203ENST00000462700 SPDYE2BA6NHP3 402 aa23.29■■□□□ 1.32
COL9A3-203ENST00000462700 SURF6O75683 361 aaKnown RBP23.29■■□□□ 1.32
COL9A3-203ENST00000462700 SPDYE6P0CI01 402 aa23.29■■□□□ 1.32
COL9A3-203ENST00000462700 DEFB115Q30KQ5 88 aa23.29■■□□□ 1.32
COL9A3-203ENST00000462700 CCDC102BQ68D86 513 aa23.29■■□□□ 1.32
COL9A3-203ENST00000462700 CDCA5Q96FF9 252 aa23.29■■□□□ 1.32
COL9A3-203ENST00000462700 SERPINA10Q9UK55 444 aa23.29■■□□□ 1.32
COL9A3-203ENST00000462700 NOP58Q9Y2X3 529 aaKnown RBP23.29■■□□□ 1.32
COL9A3-203ENST00000462700 ZBTB22O15209 634 aa23.28■■□□□ 1.32
COL9A3-203ENST00000462700 OS9Q13438 667 aaPredicted RBP23.28■■□□□ 1.32
COL9A3-203ENST00000462700 WDR66Q8TBY9 1149 aa23.28■■□□□ 1.32
COL9A3-203ENST00000462700 XAGE2Q96GT9 111 aa23.28■■□□□ 1.32
COL9A3-203ENST00000462700 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
COL9A3-203ENST00000462700 SEMA3EO15041 775 aa23.27■■□□□ 1.32
COL9A3-203ENST00000462700 VEGFBP49765 207 aa23.27■■□□□ 1.32
COL9A3-203ENST00000462700 RBM5P52756 815 aaKnown RBP eCLIP23.27■■□□□ 1.321e-6■■■■□ 23.8
COL9A3-203ENST00000462700 SAPCD2Q86UD0 394 aa23.27■■□□□ 1.32
COL9A3-203ENST00000462700 APOBEC3FQ8IUX4 373 aaKnown RBP23.27■■□□□ 1.32
COL9A3-203ENST00000462700 PRMT6Q96LA8 375 aaPredicted RBP23.27■■□□□ 1.32
COL9A3-203ENST00000462700 NEUROD6Q96NK8 337 aa23.27■■□□□ 1.32
COL9A3-203ENST00000462700 SUGT1Q9Y2Z0 365 aa23.27■■□□□ 1.32
COL9A3-203ENST00000462700 GPR108Q9NPR9 543 aa23.26■■□□□ 1.31
COL9A3-203ENST00000462700 DENND2AQ9ULE3 1009 aa23.26■■□□□ 1.31
COL9A3-203ENST00000462700 MYO1BO43795 1136 aa23.25■■□□□ 1.31
COL9A3-203ENST00000462700 CRKP46108 304 aa23.25■■□□□ 1.31
COL9A3-203ENST00000462700 GBA2Q9HCG7 927 aaPredicted RBP23.25■■□□□ 1.31
COL9A3-203ENST00000462700 AOX1Q06278 1338 aa23.25■■□□□ 1.31
COL9A3-203ENST00000462700 POLR2AP24928 1970 aaKnown RBP23.24■■□□□ 1.31
COL9A3-203ENST00000462700 CLRN2A0PK11 232 aa23.24■■□□□ 1.31
COL9A3-203ENST00000462700 HDLBPQ00341 1268 aaKnown RBP23.24■■□□□ 1.31
COL9A3-203ENST00000462700 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
COL9A3-203ENST00000462700 C2orf69Q8N8R5 385 aa23.24■■□□□ 1.31
COL9A3-203ENST00000462700 HHIPL1Q96JK4 782 aa23.24■■□□□ 1.31
COL9A3-203ENST00000462700 MAST3O60307 1309 aa23.24■■□□□ 1.31
COL9A3-203ENST00000462700 RASGRF1Q13972 1273 aa23.23■■□□□ 1.31
COL9A3-203ENST00000462700 TNNI3KQ59H18 835 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms