RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 RUFY2Q8WXA3 655 aa12.93□□□□□ -0.34
RTF1-202ENST00000462276 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
RTF1-202ENST00000462276 LRRC37AA6NMS7 1700 aa12.92□□□□□ -0.34
RTF1-202ENST00000462276 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
RTF1-202ENST00000462276 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
RTF1-202ENST00000462276 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
RTF1-202ENST00000462276 SCARF1Q14162 830 aa12.92□□□□□ -0.34
RTF1-202ENST00000462276 JDP2Q8WYK2 163 aa12.92□□□□□ -0.34
RTF1-202ENST00000462276 FSD1Q9BTV5 496 aa12.92□□□□□ -0.34
RTF1-202ENST00000462276 NFKBIEO00221 500 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
RTF1-202ENST00000462276 MMP14P50281 582 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 STRIP1Q5VSL9 837 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 ZNF277Q9NRM2 450 aaPredicted RBP12.91□□□□□ -0.34
RTF1-202ENST00000462276 LRP2BPQ9P2M1 347 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
RTF1-202ENST00000462276 SLX4Q8IY92 1834 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 CHMLP26374 656 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 AOC3Q16853 763 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 GPR101Q96P66 508 aaPredicted RBP12.9□□□□□ -0.34
RTF1-202ENST00000462276 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.34
RTF1-202ENST00000462276 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 USP17L3A6NCW0 530 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 USP17L4A6NCW7 530 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 RNF113AO15541 343 aaKnown RBP12.89□□□□□ -0.35
RTF1-202ENST00000462276 EPB41L2O43491 1005 aaKnown RBP12.89□□□□□ -0.35
RTF1-202ENST00000462276 ECE2O60344 883 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 LMNB1P20700 586 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 GSTO1P78417 241 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 USP17L1Q7RTZ2 530 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 CERS3Q8IU89 383 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
RTF1-202ENST00000462276 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 RAD50Q92878 1312 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 MAP4K4O95819 1239 aaPredicted RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 LDHBP07195 334 aaKnown RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 LDHCP07864 332 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 MFAP1P55081 439 aaKnown RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 GTF2IP78347 998 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 CHAF1AQ13111 956 aaPredicted RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 TNIP1Q15025 636 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 SLC9C2Q5TAH2 1124 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 TBC1D9Q6ZT07 1266 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 EDC3Q96F86 508 aaKnown RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 DBNDD1Q9H9R9 158 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 PIH1D3Q9NQM4 214 aaKnown RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 HELLSQ9NRZ9 838 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 ABCF2Q9UG63 623 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
RTF1-202ENST00000462276 DUOX1Q9NRD9 1551 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 TAF1P21675 1872 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 MAST3O60307 1309 aa12.88□□□□□ -0.35
RTF1-202ENST00000462276 REC8O95072 547 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
RTF1-202ENST00000462276 ADD2P35612 726 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 GPR162Q16538 588 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 MFSD14BQ5SR56 506 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 APPBP2Q92624 585 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
RTF1-202ENST00000462276 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 KIAA1551Q9HCM1 1747 aa12.87□□□□□ -0.35
RTF1-202ENST00000462276 DCAF8L1A6NGE4 600 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 PDE6AP16499 860 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
RTF1-202ENST00000462276 HDLBPQ00341 1268 aaKnown RBP12.86□□□□□ -0.35
RTF1-202ENST00000462276 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 ZMYM1Q5SVZ6 1142 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 DACT2Q5SW24 774 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
RTF1-202ENST00000462276 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
RTF1-202ENST00000462276 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
RTF1-202ENST00000462276 FZD9O00144 591 aa12.85□□□□□ -0.35
RTF1-202ENST00000462276 YBX3P16989 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
RTF1-202ENST00000462276 RPS12P25398 132 aaKnown RBP12.85□□□□□ -0.35
RTF1-202ENST00000462276 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
RTF1-202ENST00000462276 AGBL3Q8NEM8 1001 aa12.85□□□□□ -0.35
RTF1-202ENST00000462276 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
RTF1-202ENST00000462276 ESYT1Q9BSJ8 1104 aa12.85□□□□□ -0.35
RTF1-202ENST00000462276 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
RTF1-202ENST00000462276 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
RTF1-202ENST00000462276 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
RTF1-202ENST00000462276 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
RTF1-202ENST00000462276 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms