RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 STK38Q15208 465 aa21.47■■□□□ 1.03
HPS3-204ENST00000462030 FAM53CQ9NYF3 392 aa21.47■■□□□ 1.03
HPS3-204ENST00000462030 SF3A1Q15459 793 aaKnown RBP21.47■■□□□ 1.03
HPS3-204ENST00000462030 ATG9AQ7Z3C6 839 aa21.47■■□□□ 1.03
HPS3-204ENST00000462030 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
HPS3-204ENST00000462030 KIF2AO00139 706 aaPredicted RBP21.46■■□□□ 1.03
HPS3-204ENST00000462030 TERF2Q15554 542 aa21.46■■□□□ 1.03
HPS3-204ENST00000462030 SYT10Q6XYQ8 523 aa21.46■■□□□ 1.03
HPS3-204ENST00000462030 ZNF446Q9NWS9 450 aa21.46■■□□□ 1.03
HPS3-204ENST00000462030 M0R2C6 588 aa21.46■■□□□ 1.03
HPS3-204ENST00000462030 GJB4Q9NTQ9 266 aa21.46■■□□□ 1.03
HPS3-204ENST00000462030 ZRSR1Q15695 479 aaKnown RBP21.45■■□□□ 1.02
HPS3-204ENST00000462030 CCDC150Q8NCX0 1101 aa21.45■■□□□ 1.02
HPS3-204ENST00000462030 BPIFA3Q9BQP9 254 aa21.45■■□□□ 1.02
HPS3-204ENST00000462030 SNRPA1P09661 255 aaKnown RBP21.45■■□□□ 1.02
HPS3-204ENST00000462030 PHKG2P15735 406 aa21.45■■□□□ 1.02
HPS3-204ENST00000462030 ERCC6LQ2NKX8 1250 aa21.45■■□□□ 1.02
HPS3-204ENST00000462030 L2HGDHQ9H9P8 463 aa21.45■■□□□ 1.02
HPS3-204ENST00000462030 ST7Q9NRC1 585 aa21.45■■□□□ 1.02
HPS3-204ENST00000462030 SFPQP23246 707 aaKnown RBP eCLIP21.44■■□□□ 1.02
HPS3-204ENST00000462030 FOXO4P98177 505 aa21.44■■□□□ 1.02
HPS3-204ENST00000462030 NCAPHQ15003 741 aa21.44■■□□□ 1.02
HPS3-204ENST00000462030 RAB11FIP4Q86YS3 637 aa21.44■■□□□ 1.02
HPS3-204ENST00000462030 RAPGEF4Q8WZA2 1011 aa21.44■■□□□ 1.02
HPS3-204ENST00000462030 C8orf76Q96K31 380 aa21.44■■□□□ 1.02
HPS3-204ENST00000462030 SPTLC2O15270 562 aa21.43■■□□□ 1.02
HPS3-204ENST00000462030 RNF113AO15541 343 aaKnown RBP21.43■■□□□ 1.02
HPS3-204ENST00000462030 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
HPS3-204ENST00000462030 KCNG4Q8TDN1 519 aa21.43■■□□□ 1.02
HPS3-204ENST00000462030 NWD2Q9ULI1 1742 aa21.43■■□□□ 1.02
HPS3-204ENST00000462030 HAND2P61296 217 aa21.43■■□□□ 1.02
HPS3-204ENST00000462030 POLR3EQ9NVU0 708 aa21.43■■□□□ 1.02
HPS3-204ENST00000462030 PSDA5PKW4 1024 aaPredicted RBP21.42■■□□□ 1.02
HPS3-204ENST00000462030 KIF28PB7ZC32 967 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 ZNF202O95125 648 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 YEATS4O95619 227 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 IFIT1P09914 478 aaKnown RBP21.42■■□□□ 1.02
HPS3-204ENST00000462030 NLRP12P59046 1061 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 MYSM1Q5VVJ2 828 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 ISM2Q6H9L7 571 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 TTC5Q8N0Z6 440 aa21.42■■□□□ 1.02
HPS3-204ENST00000462030 LMOD1P29536 600 aaPredicted RBP21.41■■□□□ 1.02
HPS3-204ENST00000462030 EVCP57679 992 aa21.41■■□□□ 1.02
HPS3-204ENST00000462030 ZC3H6P61129 1189 aaKnown RBP21.41■■□□□ 1.02
HPS3-204ENST00000462030 LRRC24Q50LG9 513 aa21.41■■□□□ 1.02
HPS3-204ENST00000462030 CCDC93Q567U6 631 aa21.41■■□□□ 1.02
HPS3-204ENST00000462030 OSBP2Q969R2 916 aa21.41■■□□□ 1.02
HPS3-204ENST00000462030 FBXO18Q8NFZ0 1043 aa21.41■■□□□ 1.02
HPS3-204ENST00000462030 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
HPS3-204ENST00000462030 MROH7-TTC4A0A0A0MT08 1334 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 H2AFXP16104 143 aaPredicted RBP21.4■■□□□ 1.02
HPS3-204ENST00000462030 NLRP2Q9NX02 1062 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 ORC3Q9UBD5 711 aaPredicted RBP21.4■■□□□ 1.02
HPS3-204ENST00000462030 FOXP2O15409 715 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 ATP1A3P13637 1013 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 PFKFB1P16118 471 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 PLBD2Q8NHP8 589 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 HPS5Q9UPZ3 1129 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 MEGF6O75095 1541 aa21.4■■□□□ 1.02
HPS3-204ENST00000462030 KLF18A0A0U1RQI7 1052 aa21.39■■□□□ 1.02
HPS3-204ENST00000462030 GOLGA8BA8MQT2 603 aa21.39■■□□□ 1.02
HPS3-204ENST00000462030 AXDND1Q5T1B0 1012 aaPredicted RBP21.39■■□□□ 1.02
HPS3-204ENST00000462030 FANCCQ00597 558 aa21.39■■□□□ 1.01
HPS3-204ENST00000462030 FBXL16Q8N461 479 aa21.39■■□□□ 1.01
HPS3-204ENST00000462030 HSD3B7Q9H2F3 369 aa21.39■■□□□ 1.01
HPS3-204ENST00000462030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.39■■□□□ 1.01
HPS3-204ENST00000462030 A0A1B0GUL7 405 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 H7C1W4 665 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 KCNJ6P48051 423 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 TPM4P67936 248 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 PRC1O43663 620 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 WDHD1O75717 1129 aaPredicted RBP21.38■■□□□ 1.01
HPS3-204ENST00000462030 TATP17735 454 aaPredicted RBP21.38■■□□□ 1.01
HPS3-204ENST00000462030 IL15P40933 162 aaPredicted RBP21.38■■□□□ 1.01
HPS3-204ENST00000462030 ANO1Q5XXA6 986 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 CHMP4CQ96CF2 233 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 KIF1AQ12756 1690 aa21.38■■□□□ 1.01
HPS3-204ENST00000462030 CLCN6P51797 869 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 GORABQ5T7V8 394 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 BRAPQ7Z569 592 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 TRPM3Q9HCF6 1732 aaPredicted RBP21.37■■□□□ 1.01
HPS3-204ENST00000462030 MARCKSP29966 332 aaPredicted RBP21.37■■□□□ 1.01
HPS3-204ENST00000462030 KIF23Q02241 960 aaPredicted RBP21.37■■□□□ 1.01
HPS3-204ENST00000462030 FKBP4Q02790 459 aaKnown RBP eCLIP21.37■■□□□ 1.01
HPS3-204ENST00000462030 HSP90AB3PQ58FF7 597 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 SYNE3Q6ZMZ3 975 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 HOMER1Q86YM7 354 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 IFNL2Q8IZJ0 200 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 DPF2Q92785 391 aa21.37■■□□□ 1.01
HPS3-204ENST00000462030 ANTXR2P58335 489 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 MB21D2Q8IYB1 491 aaPredicted RBP21.36■■□□□ 1.01
HPS3-204ENST00000462030 PUS3Q9BZE2 481 aaKnown RBP21.36■■□□□ 1.01
HPS3-204ENST00000462030 EYA2O00167 538 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 CMA1P23946 247 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 ARHGAP29Q52LW3 1261 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 DNAI1Q9UI46 699 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 FHOD1Q9Y613 1164 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 TJP1Q07157 1748 aa21.36■■□□□ 1.01
HPS3-204ENST00000462030 NRDCO43847 1150 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms