RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 FKBP1AP62942 108 aaKnown RBP13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 TFCP2Q12800 502 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 CHAF1AQ13111 956 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 C20orf194Q5TEA3 1177 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 CEP85Q6P2H3 762 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 KIAA0825Q8IV33 1275 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 IQSEC3Q9UPP2 1182 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 FAM205AQ6ZU69 1335 aa13.1□□□□□ -0.31
TRAPPC12-213ENST00000461577 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 EGFRP00533 1210 aa13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 PGAP2Q9UHJ9 254 aa13.09□□□□□ -0.31
TRAPPC12-213ENST00000461577 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
TRAPPC12-213ENST00000461577 DCPSQ96C86 337 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-213ENST00000461577 NEUROD6Q96NK8 337 aa13.08□□□□□ -0.32
TRAPPC12-213ENST00000461577 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-213ENST00000461577 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
TRAPPC12-213ENST00000461577 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
TRAPPC12-213ENST00000461577 A0A1B0GUL7 405 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 HMMRO75330 724 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 TIMM10P62072 90 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 SCARF1Q14162 830 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 RPAP2Q8IXW5 612 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 TBC1D22AQ8WUA7 517 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 GLIS2Q9BZE0 524 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 NOP58Q9Y2X3 529 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 TRPM7Q96QT4 1865 aa13.07□□□□□ -0.32
TRAPPC12-213ENST00000461577 ADORA1P30542 326 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 PHKA1P46020 1223 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 HTRA3P83110 453 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 GGA3Q9NZ52 723 aa13.06□□□□□ -0.32
TRAPPC12-213ENST00000461577 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 TRAF5O00463 557 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 HSP90AB4PQ58FF6 505 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 ANGEL2Q5VTE6 544 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 CCDC102BQ68D86 513 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 KRT26Q7Z3Y9 468 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 ERC1Q8IUD2 1116 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 SULF1Q8IWU6 871 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 DENND2AQ9ULE3 1009 aa13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 TTF2Q9UNY4 1162 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-213ENST00000461577 WNT10BO00744 389 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 SEMA3EO15041 775 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 FMR1Q06787 632 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 NBPF9Q3BBW0 867 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 TNNI3KQ59H18 835 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 GPR108Q9NPR9 543 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 FPGT-TNNI3KV9GXZ4 949 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 PITPNM2Q9BZ72 1349 aa13.04□□□□□ -0.32
TRAPPC12-213ENST00000461577 ADM5C9JUS6 153 aa13.03□□□□□ -0.32
TRAPPC12-213ENST00000461577 MYO1BO43795 1136 aa13.03□□□□□ -0.32
TRAPPC12-213ENST00000461577 CELF2O95319 508 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-213ENST00000461577 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
TRAPPC12-213ENST00000461577 SUGT1Q9Y2Z0 365 aa13.03□□□□□ -0.32
TRAPPC12-213ENST00000461577 MAST3O60307 1309 aa13.03□□□□□ -0.32
TRAPPC12-213ENST00000461577 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.32
TRAPPC12-213ENST00000461577 TTC39AQ5SRH9 613 aa13.02□□□□□ -0.33
TRAPPC12-213ENST00000461577 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-213ENST00000461577 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
TRAPPC12-213ENST00000461577 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-213ENST00000461577 SERPINA10Q9UK55 444 aa13.02□□□□□ -0.33
TRAPPC12-213ENST00000461577 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-213ENST00000461577 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 APBB1O00213 710 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 ZBTB22O15209 634 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 CRKP46108 304 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 GRIK5Q16478 980 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 CCDC158Q5M9N0 1113 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 TEKT1Q969V4 418 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 ZBED3Q96IU2 234 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 DBNDD2Q9BQY9 259 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 COL1A1P02452 1464 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-213ENST00000461577 RAB11FIP3O75154 756 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
TRAPPC12-213ENST00000461577 HDLBPQ00341 1268 aaKnown RBP13□□□□□ -0.33
TRAPPC12-213ENST00000461577 RASGRF1Q13972 1273 aa13□□□□□ -0.33
TRAPPC12-213ENST00000461577 CST9Q5W186 159 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms