RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 CHRNDQ07001 517 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 SCRN1Q12765 414 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 RASGRF1Q13972 1273 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 CDC37L1Q7L3B6 337 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 ZNF532Q9HCE3 1301 aa23.93■■□□□ 1.42
CCM2-203ENST00000461377 LLPHQ9BRT6 129 aaKnown RBP23.92■■□□□ 1.42
CCM2-203ENST00000461377 WWC3Q9ULE0 1092 aa23.92■■□□□ 1.42
CCM2-203ENST00000461377 JAK2O60674 1132 aa23.92■■□□□ 1.42
CCM2-203ENST00000461377 APOBRQ0VD83 1088 aa23.92■■□□□ 1.42
CCM2-203ENST00000461377 TBC1D9BQ66K14 1250 aa23.92■■□□□ 1.42
CCM2-203ENST00000461377 C3orf67Q6ZVT6 689 aa23.92■■□□□ 1.42
CCM2-203ENST00000461377 SMARCC2Q8TAQ2 1214 aa23.92■■□□□ 1.42
CCM2-203ENST00000461377 DNM1Q05193 864 aaKnown RBP23.91■■□□□ 1.42
CCM2-203ENST00000461377 SLC10A5Q5PT55 438 aa23.91■■□□□ 1.42
CCM2-203ENST00000461377 HAND2P61296 217 aa23.91■■□□□ 1.42
CCM2-203ENST00000461377 DOCK2Q92608 1830 aa23.9■■□□□ 1.42
CCM2-203ENST00000461377 CSPP1Q1MSJ5 1256 aa23.9■■□□□ 1.42
CCM2-203ENST00000461377 SMIM5Q71RC9 77 aa23.9■■□□□ 1.42
CCM2-203ENST00000461377 SYAP1Q96A49 352 aaPredicted RBP23.9■■□□□ 1.42
CCM2-203ENST00000461377 GJD4Q96KN9 370 aaPredicted RBP23.9■■□□□ 1.42
CCM2-203ENST00000461377 CCNL1Q9UK58 526 aaPredicted RBP23.9■■□□□ 1.42
CCM2-203ENST00000461377 MYO5AQ9Y4I1 1855 aaKnown RBP23.89■■□□□ 1.42
CCM2-203ENST00000461377 FIBPO43427 364 aa23.89■■□□□ 1.42
CCM2-203ENST00000461377 UBE2HP62256 183 aa23.89■■□□□ 1.42
CCM2-203ENST00000461377 LRSAM1Q6UWE0 723 aa23.89■■□□□ 1.42
CCM2-203ENST00000461377 ANKRD18AQ8IVF6 992 aa23.89■■□□□ 1.42
CCM2-203ENST00000461377 MB21D2Q8IYB1 491 aaPredicted RBP23.89■■□□□ 1.42
CCM2-203ENST00000461377 ZNF274Q96GC6 653 aaPredicted RBP23.89■■□□□ 1.42
CCM2-203ENST00000461377 TCHHQ07283 1943 aa23.89■■□□□ 1.41
CCM2-203ENST00000461377 ZNF213O14771 459 aa23.89■■□□□ 1.41
CCM2-203ENST00000461377 BCAMP50895 628 aa23.89■■□□□ 1.41
CCM2-203ENST00000461377 EVCP57679 992 aa23.89■■□□□ 1.41
CCM2-203ENST00000461377 FAM182BQ5T319 152 aa23.89■■□□□ 1.41
CCM2-203ENST00000461377 BICDL1Q6ZP65 573 aa23.89■■□□□ 1.41
CCM2-203ENST00000461377 COL24A1Q17RW2 1714 aa23.88■■□□□ 1.41
CCM2-203ENST00000461377 GNPATO15228 680 aa23.88■■□□□ 1.41
CCM2-203ENST00000461377 MAP3K12Q12852 859 aa23.88■■□□□ 1.41
CCM2-203ENST00000461377 CHST3Q7LGC8 479 aa23.88■■□□□ 1.41
CCM2-203ENST00000461377 NSUN7Q8NE18 718 aaKnown RBP23.88■■□□□ 1.41
CCM2-203ENST00000461377 SRP68Q9UHB9 627 aaKnown RBP23.88■■□□□ 1.41
CCM2-203ENST00000461377 SYCE3A1L190 88 aa23.87■■□□□ 1.41
CCM2-203ENST00000461377 NYXQ9GZU5 481 aa23.87■■□□□ 1.41
CCM2-203ENST00000461377 BSDC1Q9NW68 430 aaPredicted RBP23.87■■□□□ 1.41
CCM2-203ENST00000461377 PDIA3P30101 505 aaKnown RBP23.87■■□□□ 1.41
CCM2-203ENST00000461377 MEX3CQ5U5Q3 659 aaKnown RBP23.87■■□□□ 1.41
CCM2-203ENST00000461377 NCOA7Q8NI08 942 aa23.87■■□□□ 1.41
CCM2-203ENST00000461377 STRBPQ96SI9 672 aaKnown RBP23.87■■□□□ 1.41
CCM2-203ENST00000461377 LY75O60449 1722 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 WDR19Q8NEZ3 1342 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 CTDNEP1O95476 244 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 MCM5P33992 734 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 FERMT3Q86UX7 667 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 A0A1B0GUL6 1792 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 CASZ1Q86V15 1759 aa23.86■■□□□ 1.41
CCM2-203ENST00000461377 NASPP49321 788 aaPredicted RBP23.85■■□□□ 1.41
CCM2-203ENST00000461377 MAGEB6Q8N7X4 407 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 AIDAQ96BJ3 306 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 NBPF3Q9H094 633 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 RTCBQ9Y3I0 505 aaKnown RBP23.85■■□□□ 1.41
CCM2-203ENST00000461377 ZNF804BA4D1E1 1349 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 ZMYM6O95789 1325 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 PRC1O43663 620 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 ONECUT3O60422 494 aaPredicted RBP23.85■■□□□ 1.41
CCM2-203ENST00000461377 ZPR1O75312 459 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 GTF2E1P29083 439 aaPredicted RBP23.85■■□□□ 1.41
CCM2-203ENST00000461377 ANTXR2P58335 489 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 KRT85P78386 507 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 HMGN5P82970 282 aaKnown RBP23.85■■□□□ 1.41
CCM2-203ENST00000461377 ALX1Q15699 326 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 CHMP4CQ96CF2 233 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 SETDB2Q96T68 719 aa23.85■■□□□ 1.41
CCM2-203ENST00000461377 AFF2P51816 1311 aa23.84■■□□□ 1.41
CCM2-203ENST00000461377 SALL1Q9NSC2 1324 aa23.84■■□□□ 1.41
CCM2-203ENST00000461377 UBE4AQ14139 1066 aa23.84■■□□□ 1.41
CCM2-203ENST00000461377 RALYLQ86SE5 291 aaKnown RBP23.84■■□□□ 1.41
CCM2-203ENST00000461377 DDX11Q96FC9 970 aa23.84■■□□□ 1.41
CCM2-203ENST00000461377 RBSNQ9H1K0 784 aa23.84■■□□□ 1.41
CCM2-203ENST00000461377 PTPDC1A2A3K4 754 aa23.83■■□□□ 1.41
CCM2-203ENST00000461377 CCT2P78371 535 aaKnown RBP23.83■■□□□ 1.41
CCM2-203ENST00000461377 FAM184AQ8NB25 1140 aa23.83■■□□□ 1.41
CCM2-203ENST00000461377 AMIGO3Q86WK7 504 aa23.83■■□□□ 1.41
CCM2-203ENST00000461377 CERKQ8TCT0 537 aa23.83■■□□□ 1.41
CCM2-203ENST00000461377 GPHNQ9NQX3 736 aaPredicted RBP23.83■■□□□ 1.41
CCM2-203ENST00000461377 TAF1LQ8IZX4 1826 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 PHF14O94880 888 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 APPP05067 770 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 RESTQ13127 1097 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 NBPF5PQ86XG9 351 aaPredicted RBP23.82■■□□□ 1.4
CCM2-203ENST00000461377 TBC1D10CQ8IV04 446 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 CELF1Q92879 486 aaKnown RBP23.82■■□□□ 1.4
CCM2-203ENST00000461377 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
CCM2-203ENST00000461377 NCOA5Q9HCD5 579 aaKnown RBP23.82■■□□□ 1.4
CCM2-203ENST00000461377 MINPP1Q9UNW1 487 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 ELP1O95163 1332 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 PATL2C9JE40 543 aaKnown RBP23.82■■□□□ 1.4
CCM2-203ENST00000461377 MBD4O95243 580 aa23.82■■□□□ 1.4
CCM2-203ENST00000461377 SBF2Q86WG5 1849 aa23.81■■□□□ 1.4
CCM2-203ENST00000461377 CCDC183Q5T5S1 534 aa23.81■■□□□ 1.4
CCM2-203ENST00000461377 FAM173BQ6P4H8 233 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms