RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 INSM2Q96T92 566 aaPredicted RBP11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 FAM129BQ96TA1 746 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 TSEN34Q9BSV6 310 aaKnown RBP11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 KLK14Q9P0G3 267 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
ECHDC1-212ENST00000461239 ANKRD36BQ8N2N9 1353 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 ABCA3Q99758 1704 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 P4HBP07237 508 aaKnown RBP11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 TXLNAP40222 546 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 FMR1Q06787 632 aaKnown RBP eCLIP11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 C4orf17Q53FE4 359 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 PIK3C2AO00443 1686 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 USP19O94966 1318 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 KIF7Q2M1P5 1343 aa11.04□□□□□ -0.64
ECHDC1-212ENST00000461239 AAMPQ13685 434 aa11.03□□□□□ -0.64
ECHDC1-212ENST00000461239 DSC3Q14574 896 aa11.03□□□□□ -0.64
ECHDC1-212ENST00000461239 SLC27A3Q5K4L6 730 aa11.03□□□□□ -0.64
ECHDC1-212ENST00000461239 NME9Q86XW9 330 aa11.03□□□□□ -0.64
ECHDC1-212ENST00000461239 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
ECHDC1-212ENST00000461239 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
ECHDC1-212ENST00000461239 EDC4Q6P2E9 1401 aaKnown RBP11.02□□□□□ -0.64
ECHDC1-212ENST00000461239 FAM83GA6ND36 823 aa11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 GTF2E1P29083 439 aaPredicted RBP11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 PLA2G4AP47712 749 aa11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 GNASQ5JWF2 1037 aa11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 C7orf43Q8WVR3 580 aa11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 TTC21AQ8NDW8 1320 aa11.02□□□□□ -0.65
ECHDC1-212ENST00000461239 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 GPR182O15218 404 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 IFT43Q96FT9 208 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 C8orf37Q96NL8 207 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 POLR3GLQ9BT43 218 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 BCS1LQ9Y276 419 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 AFF2P51816 1311 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
ECHDC1-212ENST00000461239 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 SLIT3O75094 1523 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 PHRF1Q9P1Y6 1649 aaKnown RBP11□□□□□ -0.65
ECHDC1-212ENST00000461239 CAPN5O15484 640 aaPredicted RBP11□□□□□ -0.65
ECHDC1-212ENST00000461239 GCP02774 474 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 ZAP70P43403 619 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
ECHDC1-212ENST00000461239 NLRP13Q86W25 1043 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 GJD3Q8N144 294 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 POLMQ9NP87 494 aaPredicted RBP11□□□□□ -0.65
ECHDC1-212ENST00000461239 POLIQ9UNA4 740 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 CCDC7Q96M83 1385 aa11□□□□□ -0.65
ECHDC1-212ENST00000461239 SLIT2O94813 1529 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 FYB1O15117 783 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 VAMP1P23763 118 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 MZF1P28698 734 aaPredicted RBP10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 ALKBH8Q96BT7 664 aaKnown RBP10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 PANK3Q9H999 370 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 ZDHHC3Q9NYG2 299 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 OVOS2A0A0J9YW53 1432 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 OVOS2Q6IE36 1432 aa10.99□□□□□ -0.65
ECHDC1-212ENST00000461239 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 PDGFAP04085 211 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 PDE3BQ13370 1112 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 ILDR2Q71H61 639 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 TREML1Q86YW5 311 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 EDEM1Q92611 657 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 KIAA0232Q92628 1395 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 NSD3Q9BZ95 1437 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 NFAT5O94916 1531 aa10.98□□□□□ -0.65
ECHDC1-212ENST00000461239 FBLN1P23142 703 aa10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 ZEB1P37275 1124 aaPredicted RBP10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 EHHADHQ08426 723 aa10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 CHRNA2Q15822 529 aa10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 RNF217Q8TC41 542 aa10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 RHPN1Q8TCX5 695 aa10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 CPDO75976 1380 aa10.97□□□□□ -0.65
ECHDC1-212ENST00000461239 PHKA2P46019 1235 aa10.96□□□□□ -0.65
ECHDC1-212ENST00000461239 DNM1Q05193 864 aaKnown RBP10.96□□□□□ -0.65
ECHDC1-212ENST00000461239 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
ECHDC1-212ENST00000461239 USP21Q9UK80 565 aa10.96□□□□□ -0.65
ECHDC1-212ENST00000461239 ATRNO75882 1429 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 UPP2O95045 317 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 ATP4AP20648 1035 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 USP5P45974 858 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 PLCB3Q01970 1234 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 ARHGEF25Q86VW2 580 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 CAMTA1Q9Y6Y1 1673 aa10.95□□□□□ -0.66
ECHDC1-212ENST00000461239 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 RECKO95980 971 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 BMP2P12643 396 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 POU4F2Q12837 409 aa10.94□□□□□ -0.66
ECHDC1-212ENST00000461239 ZNF772Q68DY9 489 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms