RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 FKBP4Q02790 459 aaKnown RBP eCLIP17.69■□□□□ 0.42
COL5A3-202ENST00000461214 OLFM4Q6UX06 510 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 SLC51AQ86UW1 340 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 HELBQ8NG08 1087 aaPredicted RBP17.69■□□□□ 0.42
COL5A3-202ENST00000461214 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 EYA3Q99504 573 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 VPS33BQ9H267 617 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 ECM29Q5VYK3 1845 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 IRS2Q9Y4H2 1338 aa17.69■□□□□ 0.42
COL5A3-202ENST00000461214 AOC2O75106 756 aa17.68■□□□□ 0.42
COL5A3-202ENST00000461214 DGKZQ13574 1117 aa17.68■□□□□ 0.42
COL5A3-202ENST00000461214 ANKRD45Q5TZF3 282 aa17.68■□□□□ 0.42
COL5A3-202ENST00000461214 CHD1LQ86WJ1 897 aa17.68■□□□□ 0.42
COL5A3-202ENST00000461214 IL1RAPL2Q9NP60 686 aa17.68■□□□□ 0.42
COL5A3-202ENST00000461214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.68■□□□□ 0.42
COL5A3-202ENST00000461214 ADAMTSL1Q8N6G6 1762 aa17.68■□□□□ 0.42
COL5A3-202ENST00000461214 AACSQ86V21 672 aa17.67■□□□□ 0.42
COL5A3-202ENST00000461214 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
COL5A3-202ENST00000461214 COL4A5P29400 1685 aa17.67■□□□□ 0.42
COL5A3-202ENST00000461214 C6orf229H3BNL8 230 aa17.66■□□□□ 0.42
COL5A3-202ENST00000461214 ZBTB22O15209 634 aa17.66■□□□□ 0.42
COL5A3-202ENST00000461214 IFIT2P09913 472 aaKnown RBP17.66■□□□□ 0.42
COL5A3-202ENST00000461214 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
COL5A3-202ENST00000461214 SMARCA5O60264 1052 aaPredicted RBP17.65■□□□□ 0.42
COL5A3-202ENST00000461214 KIAA2012Q0VF49 1180 aa17.65■□□□□ 0.42
COL5A3-202ENST00000461214 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
COL5A3-202ENST00000461214 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
COL5A3-202ENST00000461214 GJA3Q9Y6H8 435 aa17.65■□□□□ 0.42
COL5A3-202ENST00000461214 SALL3Q9BXA9 1300 aa17.65■□□□□ 0.42
COL5A3-202ENST00000461214 THSD7BQ9C0I4 1608 aa17.65■□□□□ 0.42
COL5A3-202ENST00000461214 MYH2Q9UKX2 1941 aa17.64■□□□□ 0.42
COL5A3-202ENST00000461214 TRAF5O00463 557 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 WASHC4Q2M389 1173 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 CAVIN4Q5BKX8 364 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 XAGE2Q96GT9 111 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 DBNLQ9UJU6 430 aaKnown RBP17.64■□□□□ 0.41
COL5A3-202ENST00000461214 AOX1Q06278 1338 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 TTC41PQ6P2S7 1318 aa17.64■□□□□ 0.41
COL5A3-202ENST00000461214 CASP8AP2Q9UKL3 1982 aa17.63■□□□□ 0.41
COL5A3-202ENST00000461214 SOX10P56693 466 aa17.63■□□□□ 0.41
COL5A3-202ENST00000461214 NEUROD6Q96NK8 337 aa17.63■□□□□ 0.41
COL5A3-202ENST00000461214 SNAP23O00161 211 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 MX1P20591 662 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 KLRK1P26718 216 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 IARSP41252 1262 aaKnown RBP17.62■□□□□ 0.41
COL5A3-202ENST00000461214 TIMM10P62072 90 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 ZNF512BQ96KM6 892 aaPredicted RBP17.62■□□□□ 0.41
COL5A3-202ENST00000461214 DBNDD2Q9BQY9 259 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 ZC3H12CQ9C0D7 883 aaKnown RBP17.62■□□□□ 0.41
COL5A3-202ENST00000461214 COA1Q9GZY4 146 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
COL5A3-202ENST00000461214 PDS5AQ29RF7 1337 aaKnown RBP17.62■□□□□ 0.41
COL5A3-202ENST00000461214 CDK5RAP2Q96SN8 1893 aa17.62■□□□□ 0.41
COL5A3-202ENST00000461214 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 SEMA3EO15041 775 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 PPIP5K2O43314 1243 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 ARID4AP29374 1257 aaPredicted RBP17.61■□□□□ 0.41
COL5A3-202ENST00000461214 LMOD1P29536 600 aaPredicted RBP17.61■□□□□ 0.41
COL5A3-202ENST00000461214 ADORA1P30542 326 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 GORABQ5T7V8 394 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 CST9Q5W186 159 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 VPS37DQ86XT2 251 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 GPC2Q8N158 579 aa17.61■□□□□ 0.41
COL5A3-202ENST00000461214 CCDC8Q9H0W5 538 aaPredicted RBP17.61■□□□□ 0.41
COL5A3-202ENST00000461214 COL1A1P02452 1464 aaPredicted RBP17.61■□□□□ 0.41
COL5A3-202ENST00000461214 WTIPA6NIX2 430 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-202ENST00000461214 FZD9O00144 591 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 UQCRFS1P1P0C7P4 283 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 HIBADHP31937 336 aaKnown RBP17.6■□□□□ 0.41
COL5A3-202ENST00000461214 MAP2K2P36507 400 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 AOC3Q16853 763 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 CCDC102BQ68D86 513 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 FBXO33Q7Z6M2 555 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL5A3-202ENST00000461214 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-202ENST00000461214 ECHDC1Q9NTX5 307 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 GNL3LQ9NVN8 582 aaKnown RBP17.6■□□□□ 0.41
COL5A3-202ENST00000461214 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 TLL2Q9Y6L7 1015 aa17.6■□□□□ 0.41
COL5A3-202ENST00000461214 ERC2O15083 957 aa17.59■□□□□ 0.41
COL5A3-202ENST00000461214 CA12O43570 354 aa17.59■□□□□ 0.41
COL5A3-202ENST00000461214 IL1R1P14778 569 aa17.59■□□□□ 0.41
COL5A3-202ENST00000461214 GYG1P46976 350 aa17.59■□□□□ 0.41
COL5A3-202ENST00000461214 TTC39AQ5SRH9 613 aa17.59■□□□□ 0.41
COL5A3-202ENST00000461214 OSBPL3Q9H4L5 887 aa17.59■□□□□ 0.41
COL5A3-202ENST00000461214 ATP5JP18859 108 aa17.58■□□□□ 0.4
COL5A3-202ENST00000461214 EPS15P42566 896 aa17.58■□□□□ 0.4
COL5A3-202ENST00000461214 PHKA1P46020 1223 aa17.58■□□□□ 0.4
COL5A3-202ENST00000461214 PODNQ7Z5L7 613 aa17.58■□□□□ 0.4
COL5A3-202ENST00000461214 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
COL5A3-202ENST00000461214 JDP2Q8WYK2 163 aa17.58■□□□□ 0.4
COL5A3-202ENST00000461214 TNRC18O15417 2968 aaPredicted RBP17.57■□□□□ 0.4
COL5A3-202ENST00000461214 G3V3G9 751 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 RIMBP2O15034 1052 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 ECE2O60344 883 aa17.57■□□□□ 0.4
COL5A3-202ENST00000461214 GLRX3O76003 335 aaKnown RBP17.57■□□□□ 0.4
COL5A3-202ENST00000461214 PDE4AP27815 886 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms