RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 PREPP48147 710 aa6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 ADAMTSL4Q6UY14 1074 aa6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 CCDC82Q8N4S0 544 aa6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 TMEM102Q8N9M5 508 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 C12orf50Q8NA57 414 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 SHKBP1Q8TBC3 707 aa6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 ASAP3Q8TDY4 903 aa6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 ATG3Q9NT62 314 aa6.8□□□□□ -1.32
SPTLC1-203ENST00000461132 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 TRPA1O75762 1119 aa6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 WNT11O96014 354 aa6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 ACPPP15309 386 aa6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 SNX29Q8TEQ0 813 aa6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 GGNBP2Q9H3C7 697 aa6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 POLIQ9UNA4 740 aa6.79□□□□□ -1.32
SPTLC1-203ENST00000461132 WDR64B1ANS9 1081 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 FAM13AO94988 1023 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 MAP4P27816 1152 aaKnown RBP6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 USP11P51784 963 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 MFSD14AQ96MC6 490 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 GOLGA2P5Q9HBQ8 144 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 ANGEL1Q9UNK9 670 aaKnown RBP6.78□□□□□ -1.32
SPTLC1-203ENST00000461132 MEGF11A6BM72 1044 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 NFKBIEO00221 500 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 TM4SF5O14894 197 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 MED26O95402 600 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 TAL1P17542 331 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 ZKSCAN3Q9BRR0 538 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 OSBPL1AQ9BXW6 950 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 SLAIN2Q9P270 581 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 LEMD3Q9Y2U8 911 aa6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 OAS3Q9Y6K5 1087 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-203ENST00000461132 TNFRSF21O75509 655 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 SPINK2P20155 84 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 PAOXQ6QHF9 649 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 FBXL6Q8N531 539 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 NXPE3Q969Y0 559 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 HHIPQ96QV1 700 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 ARID3AQ99856 593 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 CHRDQ9H2X0 955 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 AMOTL2Q9Y2J4 779 aa6.76□□□□□ -1.33
SPTLC1-203ENST00000461132 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 BTBD11A6QL63 1104 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 SOX1O00570 391 aaPredicted RBP6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 EREGO14944 169 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 GSTM4Q03013 218 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 SGO2Q562F6 1265 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 DTX1Q86Y01 620 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
SPTLC1-203ENST00000461132 FAM95CA0A1B0GW59 222 aa6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 ABL1P00519 1130 aa6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 MTMR3Q13615 1198 aa6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 CPSF6Q16630 551 aaKnown RBP eCLIP6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 EXOSC6Q5RKV6 272 aaKnown RBP6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 HP1BP3Q5SSJ5 553 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 SMG8Q8ND04 991 aaKnown RBP6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 METTL22Q9BUU2 404 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 RNF114Q9Y508 228 aa6.74□□□□□ -1.33
SPTLC1-203ENST00000461132 PPP1R15AO75807 674 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 SSFA2P28290 1259 aa6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 SF3B2Q13435 895 aaKnown RBP6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 VN1R5Q7Z5H4 357 aa6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 KRTAP4-12Q9BQ66 201 aa6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 TMPRSS13Q9BYE2 586 aa6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 FOXD3Q9UJU5 478 aaPredicted RBP6.73□□□□□ -1.33
SPTLC1-203ENST00000461132 LOC100289279A0A1B0GTE1 492 aa6.72□□□□□ -1.33
SPTLC1-203ENST00000461132 YBX3P16989 372 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPTLC1-203ENST00000461132 HGSNATQ68CP4 663 aa6.72□□□□□ -1.33
SPTLC1-203ENST00000461132 BHLHE41Q9C0J9 482 aaPredicted RBP6.72□□□□□ -1.33
SPTLC1-203ENST00000461132 NEFLP07196 543 aa6.71□□□□□ -1.34
SPTLC1-203ENST00000461132 ESRRAP11474 423 aaPredicted RBP6.71□□□□□ -1.34
SPTLC1-203ENST00000461132 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
SPTLC1-203ENST00000461132 TBC1D32Q96NH3 1257 aa6.71□□□□□ -1.34
SPTLC1-203ENST00000461132 RAD18Q9NS91 495 aa6.71□□□□□ -1.34
SPTLC1-203ENST00000461132 CYP11A1P05108 521 aa6.7□□□□□ -1.34
SPTLC1-203ENST00000461132 FBLIM1Q8WUP2 373 aa6.7□□□□□ -1.34
SPTLC1-203ENST00000461132 CYP26A1O43174 497 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 TIAF1O95411 115 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 DRD2P14416 443 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 FOSL1P15407 271 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 NPR3P17342 541 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 SOX4Q06945 474 aaPredicted RBP6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 B4GALNT3Q6L9W6 998 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 TP53INP2Q8IXH6 220 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 FMNL2Q96PY5 1086 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 ZFYVE28Q9HCC9 887 aa6.69□□□□□ -1.34
SPTLC1-203ENST00000461132 TMEM88BA6NKF7 163 aa6.68□□□□□ -1.34
SPTLC1-203ENST00000461132 F13BP05160 661 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms