RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 LRP8Q14114 963 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 TMEM130Q8N3G9 435 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 RBSNQ9H1K0 784 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 CD109Q6YHK3 1445 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 CCDC18Q5T9S5 1454 aa7.23□□□□□ -1.25
ATPAF1-203ENST00000460928 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 J3QW42 95 aa7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 PTCD1O75127 700 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 MEGF10Q96KG7 1140 aa7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 NSUN5Q96P11 429 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 MRPL18Q9H0U6 180 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 CDK11AQ9UQ88 783 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 ABCA9Q8IUA7 1624 aa7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 ZNF644Q9H582 1327 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-203ENST00000460928 MFAP1P55081 439 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 FAM26DQ5JW98 314 aa7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 DZIP1LQ8IYY4 767 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 OR13H1Q8NG92 308 aa7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 MUC3BQ9H195 1237 aa7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 LRRC9Q6ZRR7 1453 aa7.21□□□□□ -1.26
ATPAF1-203ENST00000460928 NCOA2Q15596 1464 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 RAPGEF3O95398 923 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 SETDB1Q15047 1291 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 GDF6Q6KF10 455 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 IL22RA1Q8N6P7 574 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 RGS22Q8NE09 1264 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 AKTIPQ9H8T0 292 aa7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 MED1Q15648 1581 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-203ENST00000460928 MADDQ8WXG6 1647 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 CDC42BPAQ5VT25 1732 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 CDC42BPBQ9Y5S2 1711 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 EHBP1L1Q8N3D4 1523 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 GPATCH8Q9UKJ3 1502 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 TMEM88BA6NKF7 163 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 UBAP1LF5GYI3 381 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 TMEM164Q5U3C3 297 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 PRR23CQ6ZRP0 262 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 Q6ZS46 218 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 CAPN12Q6ZSI9 719 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 SLC51AQ86UW1 340 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 MTMR7Q9Y216 660 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 FNDC3AQ9Y2H6 1198 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 PHLDB1Q86UU1 1377 aa7.19□□□□□ -1.26
ATPAF1-203ENST00000460928 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 ZAP70P43403 619 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 MKNK1Q9BUB5 465 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 STIM2Q9P246 746 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 RNF112Q9ULX5 631 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 TRIM33Q9UPN9 1127 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 MYO5CQ9NQX4 1742 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 PLCH2O75038 1416 aa7.18□□□□□ -1.26
ATPAF1-203ENST00000460928 ARHGAP5Q13017 1502 aa7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 HYAL3O43820 417 aaPredicted RBP7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 HYAL2Q12891 473 aa7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 ABTB2Q8N961 1025 aa7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 CCNB3Q8WWL7 1395 aa7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 FANCAO15360 1455 aa7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 ARHGEF12Q9NZN5 1544 aa7.17□□□□□ -1.26
ATPAF1-203ENST00000460928 RIMS1Q86UR5 1692 aaKnown RBP7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 SUPT6HQ7KZ85 1726 aaKnown RBP7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 KIF4AO95239 1232 aa7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 NAA30Q147X3 362 aaPredicted RBP7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 PPME1Q9Y570 386 aa7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 AKNAQ7Z591 1439 aa7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 SAMD9LQ8IVG5 1584 aa7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 PREX2Q70Z35 1606 aa7.16□□□□□ -1.26
ATPAF1-203ENST00000460928 BCORL1Q5H9F3 1711 aa7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 COL13A1Q5TAT6 717 aaPredicted RBP7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 EFCAB2Q5VUJ9 269 aa7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 AFAP1Q8N556 730 aa7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 SPACA7Q96KW9 195 aa7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 ABI2Q9NYB9 513 aaPredicted RBP7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 CFDP1Q9UEE9 299 aaPredicted RBP7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 IVNS1ABPQ9Y6Y0 642 aa7.15□□□□□ -1.26
ATPAF1-203ENST00000460928 SCAPERQ9BY12 1400 aa7.15□□□□□ -1.27
ATPAF1-203ENST00000460928 TRAPPC8Q9Y2L5 1435 aa7.15□□□□□ -1.27
ATPAF1-203ENST00000460928 MAP3K1Q13233 1512 aa7.15□□□□□ -1.27
ATPAF1-203ENST00000460928 ZBTB39O15060 712 aa7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 SMNDC1O75940 238 aaKnown RBP eCLIP7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 ALX3O95076 343 aa7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 FRMPD1Q5SYB0 1578 aa7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 TTC39BQ5VTQ0 682 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 PDE12Q6L8Q7 609 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 KRTAP1-3Q8IUG1 177 aa7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 GPR152Q8TDT2 470 aa7.14□□□□□ -1.27
ATPAF1-203ENST00000460928 SYCP2Q9BX26 1530 aa7.13□□□□□ -1.27
ATPAF1-203ENST00000460928 TM4SF5O14894 197 aa7.13□□□□□ -1.27
ATPAF1-203ENST00000460928 ATP11AP98196 1134 aa7.13□□□□□ -1.27
ATPAF1-203ENST00000460928 GALNT11Q8NCW6 608 aa7.13□□□□□ -1.27
ATPAF1-203ENST00000460928 KRTAP4-12Q9BQ66 201 aa7.13□□□□□ -1.27
ATPAF1-203ENST00000460928 SLAIN2Q9P270 581 aa7.13□□□□□ -1.27
ATPAF1-203ENST00000460928 CAMSAP2Q08AD1 1489 aa7.12□□□□□ -1.27
ATPAF1-203ENST00000460928 NEO1Q92859 1461 aa7.12□□□□□ -1.27
ATPAF1-203ENST00000460928 MYOM3Q5VTT5 1437 aa7.12□□□□□ -1.27
ATPAF1-203ENST00000460928 FSTP19883 344 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms