RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 ALX3O95076 343 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 CD68P34810 354 aaPredicted RBP4.31□□□□□ -1.72
PTPN22-203ENST00000460620 ALKBH2Q6NS38 261 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 NCAPG2Q86XI2 1143 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 TTC16Q8NEE8 873 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 WNT8BQ93098 351 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 PMEPA1Q969W9 287 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 CEP41Q9BYV8 373 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 LACRTQ9GZZ8 138 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 ADAM19Q9H013 955 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 RASSF4Q9H2L5 321 aa4.31□□□□□ -1.72
PTPN22-203ENST00000460620 CYP2E1P05181 493 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-203ENST00000460620 GLB1P16278 677 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 NOM1Q5C9Z4 860 aaKnown RBP4.3□□□□□ -1.72
PTPN22-203ENST00000460620 GALNT11Q8NCW6 608 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 FAM53CQ9NYF3 392 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 TMEM63CQ9P1W3 806 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 FSCN2O14926 492 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 MZF1P28698 734 aaPredicted RBP4.3□□□□□ -1.72
PTPN22-203ENST00000460620 CABP4P57796 275 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 UVSSAQ2YD98 709 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 EDEM1Q92611 657 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 PPP1R16BQ96T49 567 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 STOML1Q9UBI4 398 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 SALL4Q9UJQ4 1053 aa4.3□□□□□ -1.72
PTPN22-203ENST00000460620 H3BRJ5 948 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 TM4SF5O14894 197 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 PDGFAP04085 211 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 HOXA5P20719 270 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 CES1P23141 567 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 PIP4K2BP78356 416 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 ACAD11Q709F0 780 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 ATCAYQ86WG3 371 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 AGGF1Q8N302 714 aaeCLIP4.29□□□□□ -1.72
PTPN22-203ENST00000460620 AGBL5Q8NDL9 886 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 TMEM40Q8WWA1 233 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 POP1Q99575 1024 aaKnown RBP4.29□□□□□ -1.72
PTPN22-203ENST00000460620 OSGEPQ9NPF4 335 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 SEC31BQ9NQW1 1179 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 CNTN3Q9P232 1028 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 MTMR7Q9Y216 660 aa4.29□□□□□ -1.72
PTPN22-203ENST00000460620 TMEM88BA6NKF7 163 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 DHX15O43143 795 aaKnown RBP4.28□□□□□ -1.72
PTPN22-203ENST00000460620 NPR3P17342 541 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 SYN1P17600 705 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 EPHA1P21709 976 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 SSFA2P28290 1259 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 EIF1AXP47813 144 aaKnown RBP4.28□□□□□ -1.72
PTPN22-203ENST00000460620 DNM1Q05193 864 aaKnown RBP4.28□□□□□ -1.72
PTPN22-203ENST00000460620 ANKLE2Q86XL3 938 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 TP53INP2Q8IXH6 220 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 GTF3C2Q8WUA4 911 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-203ENST00000460620 UBL7Q96S82 380 aaPredicted RBP4.28□□□□□ -1.72
PTPN22-203ENST00000460620 KANSL3Q9P2N6 904 aa4.28□□□□□ -1.72
PTPN22-203ENST00000460620 ARID3CA6NKF2 412 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 WISP1O95388 367 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 TSPAN15O95858 294 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 MPSTP25325 297 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 USP5P45974 858 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 EHHADHQ08426 723 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 NFIAQ12857 509 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 DUOXA2Q1HG44 320 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 CARMIL2Q6F5E8 1435 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 TXNDC11Q6PKC3 985 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 KIAA1211Q6ZU35 1233 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 VSIG10LQ86VR7 867 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 C1orf127Q8N9H9 656 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 GGNBP2Q9H3C7 697 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 SH2B1Q9NRF2 756 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-203ENST00000460620 DZANK1Q9NVP4 752 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 KCNK4Q9NYG8 393 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 GTF3C3Q9Y5Q9 886 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 NFKBIEO00221 500 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 PDE2AO00408 941 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-203ENST00000460620 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-203ENST00000460620 FAM13AO94988 1023 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 MESP2Q0VG99 397 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 C8orf34Q49A92 452 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 ADAMTSL4Q6UY14 1074 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 CCDC82Q8N4S0 544 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 TMEM102Q8N9M5 508 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-203ENST00000460620 FAM46AQ96IP4 442 aaKnown RBP4.27□□□□□ -1.73
PTPN22-203ENST00000460620 DBNDD2Q9BQY9 259 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 CARD10Q9BWT7 1032 aa4.27□□□□□ -1.73
PTPN22-203ENST00000460620 CDC25BP30305 580 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 ARL4DP49703 201 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 SF3B2Q13435 895 aaKnown RBP4.26□□□□□ -1.73
PTPN22-203ENST00000460620 ANKRD34AQ69YU3 496 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 ARMC10Q8N2F6 343 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 FOXD4L4Q8WXT5 416 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-203ENST00000460620 UTP4Q969X6 686 aaKnown RBP4.26□□□□□ -1.73
PTPN22-203ENST00000460620 KLHDC7BQ96G42 594 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 CHRDQ9H2X0 955 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 POLIQ9UNA4 740 aa4.26□□□□□ -1.73
PTPN22-203ENST00000460620 EIF4EBP3O60516 100 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-203ENST00000460620 ADAM11O75078 769 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 PRNPP04156 253 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 EDN3P14138 238 aa4.25□□□□□ -1.73
PTPN22-203ENST00000460620 SNX29Q8TEQ0 813 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms