RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ZFYP08048 801 aaPredicted RBP20.16■□□□□ 0.82
YIPF3-205ENST00000460547 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 BLOC1S2Q6QNY1 142 aa20.16■□□□□ 0.82
YIPF3-205ENST00000460547 DDX60Q8IY21 1712 aaKnown RBP20.15■□□□□ 0.82
YIPF3-205ENST00000460547 RNF113AO15541 343 aaKnown RBP20.15■□□□□ 0.82
YIPF3-205ENST00000460547 CPA1P15085 419 aa20.15■□□□□ 0.82
YIPF3-205ENST00000460547 RPS6KB1P23443 525 aa20.15■□□□□ 0.82
YIPF3-205ENST00000460547 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
YIPF3-205ENST00000460547 MASTLQ96GX5 879 aa20.15■□□□□ 0.82
YIPF3-205ENST00000460547 CNNM1Q9NRU3 951 aa20.15■□□□□ 0.82
YIPF3-205ENST00000460547 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
YIPF3-205ENST00000460547 MROH5Q6ZUA9 1318 aa20.14■□□□□ 0.82
YIPF3-205ENST00000460547 WDR33Q9C0J8 1336 aaKnown RBP20.14■□□□□ 0.82
YIPF3-205ENST00000460547 FSD2A1L4K1 749 aa20.14■□□□□ 0.81
YIPF3-205ENST00000460547 SRGNP10124 158 aa20.14■□□□□ 0.81
YIPF3-205ENST00000460547 KLHL40Q2TBA0 621 aa20.14■□□□□ 0.81
YIPF3-205ENST00000460547 SEC62Q99442 399 aaKnown RBP20.14■□□□□ 0.81
YIPF3-205ENST00000460547 PDE8BO95263 885 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 NTSR2O95665 410 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 ERFEQ4G0M1 354 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 L1TD1Q5T7N2 865 aaKnown RBP20.13■□□□□ 0.81
YIPF3-205ENST00000460547 STYK1Q6J9G0 422 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 CCDC129Q6ZRS4 1044 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 MAST3O60307 1309 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 CHD4Q14839 1912 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 CHGBP05060 677 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 MCTP1Q6DN14 999 aa20.13■□□□□ 0.81
YIPF3-205ENST00000460547 ZNF784Q8NCA9 323 aaPredicted RBP20.13■□□□□ 0.81
YIPF3-205ENST00000460547 LARGE1O95461 756 aa20.12■□□□□ 0.81
YIPF3-205ENST00000460547 NPR1P16066 1061 aa20.12■□□□□ 0.81
YIPF3-205ENST00000460547 LMBRD1Q9NUN5 540 aa20.12■□□□□ 0.81
YIPF3-205ENST00000460547 TAF6LQ9Y6J9 622 aa20.12■□□□□ 0.81
YIPF3-205ENST00000460547 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
YIPF3-205ENST00000460547 FGFR2P21802 821 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 PUM3Q15397 648 aaKnown RBP20.1■□□□□ 0.81
YIPF3-205ENST00000460547 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
YIPF3-205ENST00000460547 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 CYP21A2P08686 494 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 ARID4AP29374 1257 aaPredicted RBP20.1■□□□□ 0.81
YIPF3-205ENST00000460547 ALDH1B1P30837 517 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 FKBP4Q02790 459 aaKnown RBP eCLIP20.1■□□□□ 0.81
YIPF3-205ENST00000460547 SCARF1Q14162 830 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 NEK1Q96PY6 1258 aa20.1■□□□□ 0.81
YIPF3-205ENST00000460547 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
YIPF3-205ENST00000460547 C21orf2O43822 256 aa20.09■□□□□ 0.81
YIPF3-205ENST00000460547 HMGB1P09429 215 aaKnown RBP20.09■□□□□ 0.81
YIPF3-205ENST00000460547 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
YIPF3-205ENST00000460547 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
YIPF3-205ENST00000460547 ST3GAL1Q11201 340 aa20.09■□□□□ 0.81
YIPF3-205ENST00000460547 ME3Q16798 604 aa20.09■□□□□ 0.81
YIPF3-205ENST00000460547 LPIN2Q92539 896 aa20.09■□□□□ 0.81
YIPF3-205ENST00000460547 NLRP3Q96P20 1036 aa20.09■□□□□ 0.81
YIPF3-205ENST00000460547 TPCN1Q9ULQ1 816 aa20.09■□□□□ 0.81
YIPF3-205ENST00000460547 AKAP11Q9UKA4 1901 aa20.08■□□□□ 0.81
YIPF3-205ENST00000460547 GOLGA6L3A6NEY3 463 aa20.08■□□□□ 0.81
YIPF3-205ENST00000460547 UQCRFS1P1P0C7P4 283 aa20.08■□□□□ 0.81
YIPF3-205ENST00000460547 ZAP70P43403 619 aa20.08■□□□□ 0.81
YIPF3-205ENST00000460547 TOB2Q14106 344 aaPredicted RBP20.08■□□□□ 0.81
YIPF3-205ENST00000460547 CCDC83Q8IWF9 413 aa20.08■□□□□ 0.81
YIPF3-205ENST00000460547 APPBP2Q92624 585 aa20.08■□□□□ 0.81
YIPF3-205ENST00000460547 DDX49Q9Y6V7 483 aaKnown RBP20.08■□□□□ 0.81
YIPF3-205ENST00000460547 BRCA1P38398 1863 aaKnown RBP20.08■□□□□ 0.8
YIPF3-205ENST00000460547 HSPD1P10809 573 aaKnown RBP20.07■□□□□ 0.8
YIPF3-205ENST00000460547 MCAMP43121 646 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 TTF1Q15361 905 aaPredicted RBP20.07■□□□□ 0.8
YIPF3-205ENST00000460547 RPGRQ92834 1020 aaKnown RBP20.07■□□□□ 0.8
YIPF3-205ENST00000460547 OSBP2Q969R2 916 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 ANKRD31Q8N7Z5 1873 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 MYH7P12883 1935 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 M0R2C6 588 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
YIPF3-205ENST00000460547 SLC10A5Q5PT55 438 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 ZSCAN25Q6NSZ9 544 aa20.07■□□□□ 0.8
YIPF3-205ENST00000460547 LARP6Q9BRS8 491 aaKnown RBP20.07■□□□□ 0.8
YIPF3-205ENST00000460547 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.07■□□□□ 0.8
YIPF3-205ENST00000460547 ZSCAN22P10073 491 aaPredicted RBP20.06■□□□□ 0.8
YIPF3-205ENST00000460547 SOGA3Q5TF21 947 aa20.06■□□□□ 0.8
YIPF3-205ENST00000460547 C9orf131Q5VYM1 1079 aa20.06■□□□□ 0.8
YIPF3-205ENST00000460547 STX6O43752 255 aa20.05■□□□□ 0.8
YIPF3-205ENST00000460547 SLC5A1P13866 664 aa20.05■□□□□ 0.8
YIPF3-205ENST00000460547 SYT1P21579 422 aa20.05■□□□□ 0.8
YIPF3-205ENST00000460547 SLFNL1Q499Z3 407 aa20.05■□□□□ 0.8
YIPF3-205ENST00000460547 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
YIPF3-205ENST00000460547 CCDC102BQ68D86 513 aa20.05■□□□□ 0.8
YIPF3-205ENST00000460547 RBM17Q96I25 401 aaKnown RBP20.04■□□□□ 0.8
YIPF3-205ENST00000460547 MPHOSPH8Q99549 860 aa20.04■□□□□ 0.8
YIPF3-205ENST00000460547 RNF181Q9P0P0 153 aa20.04■□□□□ 0.8
YIPF3-205ENST00000460547 CTNNA3Q9UI47 895 aa20.04■□□□□ 0.8
YIPF3-205ENST00000460547 ARFGEF1Q9Y6D6 1849 aa20.04■□□□□ 0.8
YIPF3-205ENST00000460547 GJB2P29033 226 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 IGHMBP2P38935 993 aaKnown RBP20.03■□□□□ 0.8
YIPF3-205ENST00000460547 RASSF7Q02833 373 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 STOX1Q6ZVD7 989 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 DLEC1Q9Y238 1755 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 PRPF40AO75400 957 aaKnown RBP20.03■□□□□ 0.8
YIPF3-205ENST00000460547 MBD3O95983 291 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 ADD2P35612 726 aa20.03■□□□□ 0.8
YIPF3-205ENST00000460547 PHKA1P46020 1223 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms